data_6US8 # _model_server_result.job_id YrUFVhnzrEDA-iedSIgb_g _model_server_result.datetime_utc '2025-02-05 14:59:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6us8 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"V","auth_seq_id":101}' # _entry.id 6US8 # _exptl.entry_id 6US8 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 179.302 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description (1S)-1-[(3R,5R,7R)-tricyclo[3.3.1.1~3,7~]decan-1-yl]ethan-1-amine _entity.pdbx_number_of_molecules 12 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6US8 _cell.length_a 49.39 _cell.length_b 76.09 _cell.length_c 98.63 _cell.Z_PDB 64 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6US8 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 PISA tetrameric 4 author_and_software_defined_assembly 3 PISA tetrameric 4 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,Q,R,S,GA,HA,IA,JA 1 1 E,F,G,H,T,U,V,KA,LA,MA,NA 2 1 I,J,K,L,W,X,Y,Z,AA,OA,PA,QA,RA 3 1 M,N,O,P,BA,CA,DA,EA,FA,SA,TA,UA,VA 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 R N N ? 3 S N N ? 3 U N N ? 3 V N N ? 3 W N N ? 3 Y N N ? 3 Z N N ? 3 AA N N ? 3 CA N N ? 3 DA N N ? 3 EA N N ? 3 FA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C LEU 26 A LEU 46 1_555 A N NH2 27 A NH2 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.313 ? covale ? covale2 B C LEU 26 B LEU 46 1_555 B N NH2 27 B NH2 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale3 C C LEU 26 C LEU 46 1_555 C N NH2 27 C NH2 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale4 D C LEU 26 D LEU 46 1_555 D N NH2 27 D NH2 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale5 E C LEU 26 E LEU 46 1_555 E N NH2 27 E NH2 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.315 ? covale ? covale6 F C LEU 26 F LEU 46 1_555 F N NH2 27 F NH2 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.315 ? covale ? covale7 G C LEU 26 G LEU 46 1_555 G N NH2 27 G NH2 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? covale ? covale8 H C LEU 26 H LEU 46 1_555 H N NH2 27 H NH2 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale9 I C LEU 26 I LEU 46 1_555 I N NH2 27 I NH2 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale10 J C LEU 26 J LEU 46 1_555 J N NH2 27 J NH2 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale11 K C LEU 26 K LEU 46 1_555 K N NH2 27 K NH2 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.323 ? covale ? covale12 L C LEU 26 L LEU 46 1_555 L N NH2 27 L NH2 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? covale ? covale13 M C LEU 26 M LEU 46 1_555 M N NH2 27 M NH2 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale14 N C LEU 26 N LEU 46 1_555 N N NH2 27 N NH2 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? covale ? covale15 O C LEU 26 O LEU 46 1_555 O N NH2 27 O NH2 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? covale ? covale16 P C LEU 26 P LEU 46 1_555 P N NH2 27 P NH2 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.321 ? # _chem_comp.formula 'C12 H21 N' _chem_comp.formula_weight 179.302 _chem_comp.id EU7 _chem_comp.mon_nstd_flag . _chem_comp.name (1S)-1-[(3R,5R,7R)-tricyclo[3.3.1.1~3,7~]decan-1-yl]ethan-1-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms S-RIMANTADINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CA CB EU7 sing 60 n n CB NC EU7 sing 61 n n CB CD EU7 sing 62 n n CD CE1 EU7 sing 63 n n CD CE2 EU7 sing 64 n n CD CE3 EU7 sing 65 n n CE1 CF1 EU7 sing 66 n n CE2 CF2 EU7 sing 67 n n CE3 CF3 EU7 sing 68 n n CF1 CG1 EU7 sing 69 n n CF1 CG3 EU7 sing 70 n n CF2 CG1 EU7 sing 71 n n CF2 CG2 EU7 sing 72 n n CF3 CG2 EU7 sing 73 n n CF3 CG3 EU7 sing 74 n n CA HA3 EU7 sing 75 n n CA HA2 EU7 sing 76 n n CA HA1 EU7 sing 77 n n CB HB EU7 sing 78 n n NC HNC2 EU7 sing 79 n n NC HNC3 EU7 sing 80 n n CE1 HE12 EU7 sing 81 n n CE1 HE11 EU7 sing 82 n n CE2 HE22 EU7 sing 83 n n CE2 HE21 EU7 sing 84 n n CE3 HE32 EU7 sing 85 n n CE3 HE31 EU7 sing 86 n n CF1 HF1 EU7 sing 87 n n CF2 HF2 EU7 sing 88 n n CF3 HF3 EU7 sing 89 n n CG1 HG12 EU7 sing 90 n n CG1 HG11 EU7 sing 91 n n CG2 HG22 EU7 sing 92 n n CG2 HG21 EU7 sing 93 n n CG3 HG32 EU7 sing 94 n n CG3 HG31 EU7 sing 95 n n # _atom_sites.entry_id 6US8 _atom_sites.fract_transf_matrix[1][1] 0.020247 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.013142 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010139 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code Q 2 CL B 1 101 3 CL CL . R 3 EU7 B 1 102 1 EU7 EU7 . S 3 EU7 B 1 103 3 EU7 EU7 . T 2 CL E 1 101 1 CL CL . U 3 EU7 E 1 102 1 EU7 EU7 . V 3 EU7 H 1 101 8 EU7 EU7 . W 3 EU7 J 1 101 2 EU7 EU7 . X 2 CL K 1 101 4 CL CL . Y 3 EU7 L 1 101 1 EU7 EU7 . Z 3 EU7 L 1 102 1 EU7 EU7 . AA 3 EU7 L 1 103 7 EU7 EU7 . BA 2 CL M 1 101 2 CL CL . CA 3 EU7 M 1 102 1 EU7 EU7 . DA 3 EU7 M 1 103 6 EU7 EU7 . EA 3 EU7 N 1 101 5 EU7 EU7 . FA 3 EU7 O 1 101 4 EU7 EU7 . GA 4 HOH A 1 101 17 HOH HOH . GA 4 HOH A 2 102 60 HOH HOH . GA 4 HOH A 3 103 94 HOH HOH . HA 4 HOH B 1 201 20 HOH HOH . HA 4 HOH B 2 202 62 HOH HOH . HA 4 HOH B 3 203 18 HOH HOH . HA 4 HOH B 4 204 13 HOH HOH . HA 4 HOH B 5 205 16 HOH HOH . HA 4 HOH B 6 206 63 HOH HOH . HA 4 HOH B 7 207 15 HOH HOH . HA 4 HOH B 8 208 76 HOH HOH . HA 4 HOH B 9 209 61 HOH HOH . HA 4 HOH B 10 210 93 HOH HOH . HA 4 HOH B 11 211 77 HOH HOH . IA 4 HOH C 1 101 14 HOH HOH . IA 4 HOH C 2 102 92 HOH HOH . IA 4 HOH C 3 103 58 HOH HOH . JA 4 HOH D 1 101 57 HOH HOH . JA 4 HOH D 2 102 19 HOH HOH . JA 4 HOH D 3 103 59 HOH HOH . JA 4 HOH D 4 104 32 HOH HOH . KA 4 HOH E 1 201 23 HOH HOH . KA 4 HOH E 2 202 21 HOH HOH . KA 4 HOH E 3 203 52 HOH HOH . KA 4 HOH E 4 204 25 HOH HOH . KA 4 HOH E 5 205 27 HOH HOH . KA 4 HOH E 6 206 74 HOH HOH . KA 4 HOH E 7 207 28 HOH HOH . KA 4 HOH E 8 208 71 HOH HOH . KA 4 HOH E 9 209 48 HOH HOH . KA 4 HOH E 10 210 30 HOH HOH . LA 4 HOH F 1 101 54 HOH HOH . LA 4 HOH F 2 102 26 HOH HOH . LA 4 HOH F 3 103 49 HOH HOH . LA 4 HOH F 4 104 75 HOH HOH . MA 4 HOH G 1 101 87 HOH HOH . MA 4 HOH G 2 102 24 HOH HOH . MA 4 HOH G 3 103 50 HOH HOH . MA 4 HOH G 4 104 51 HOH HOH . MA 4 HOH G 5 105 73 HOH HOH . NA 4 HOH H 1 201 53 HOH HOH . NA 4 HOH H 2 202 22 HOH HOH . NA 4 HOH H 3 203 72 HOH HOH . NA 4 HOH H 4 204 47 HOH HOH . OA 4 HOH I 1 101 82 HOH HOH . OA 4 HOH I 2 102 83 HOH HOH . OA 4 HOH I 3 103 8 HOH HOH . OA 4 HOH I 4 104 79 HOH HOH . OA 4 HOH I 5 105 65 HOH HOH . OA 4 HOH I 6 106 90 HOH HOH . OA 4 HOH I 7 107 80 HOH HOH . PA 4 HOH J 1 201 68 HOH HOH . PA 4 HOH J 2 202 5 HOH HOH . PA 4 HOH J 3 203 67 HOH HOH . QA 4 HOH K 1 201 84 HOH HOH . QA 4 HOH K 2 202 66 HOH HOH . QA 4 HOH K 3 203 6 HOH HOH . QA 4 HOH K 4 204 10 HOH HOH . QA 4 HOH K 5 205 78 HOH HOH . QA 4 HOH K 6 206 12 HOH HOH . RA 4 HOH L 1 201 2 HOH HOH . RA 4 HOH L 2 202 4 HOH HOH . RA 4 HOH L 3 203 3 HOH HOH . RA 4 HOH L 4 204 7 HOH HOH . RA 4 HOH L 5 205 1 HOH HOH . RA 4 HOH L 6 206 81 HOH HOH . RA 4 HOH L 7 207 64 HOH HOH . RA 4 HOH L 8 208 9 HOH HOH . SA 4 HOH M 1 201 34 HOH HOH . SA 4 HOH M 2 202 39 HOH HOH . SA 4 HOH M 3 203 38 HOH HOH . SA 4 HOH M 4 204 33 HOH HOH . SA 4 HOH M 5 205 36 HOH HOH . SA 4 HOH M 6 206 86 HOH HOH . SA 4 HOH M 7 207 55 HOH HOH . SA 4 HOH M 8 208 45 HOH HOH . SA 4 HOH M 9 209 70 HOH HOH . TA 4 HOH N 1 201 56 HOH HOH . TA 4 HOH N 2 202 37 HOH HOH . TA 4 HOH N 3 203 89 HOH HOH . TA 4 HOH N 4 204 43 HOH HOH . TA 4 HOH N 5 205 85 HOH HOH . TA 4 HOH N 6 206 46 HOH HOH . TA 4 HOH N 7 207 69 HOH HOH . UA 4 HOH O 1 201 40 HOH HOH . UA 4 HOH O 2 202 41 HOH HOH . VA 4 HOH P 1 101 88 HOH HOH . VA 4 HOH P 2 102 35 HOH HOH . VA 4 HOH P 3 103 44 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CD EU7 . . . V 3 35.041 -30.63 -36.238 1 33.61 ? CD EU7 101 H 1 HETATM 2 C CE1 EU7 . . . V 3 36.467 -30.123 -36.031 1 41.92 ? CE1 EU7 101 H 1 HETATM 3 C CE2 EU7 . . . V 3 34.34 -29.767 -37.287 1 42.12 ? CE2 EU7 101 H 1 HETATM 4 C CE3 EU7 . . . V 3 34.274 -30.551 -34.918 1 45.75 ? CE3 EU7 101 H 1 HETATM 5 C CF1 EU7 . . . V 3 36.427 -28.671 -35.551 1 27.66 ? CF1 EU7 101 H 1 HETATM 6 C CF2 EU7 . . . V 3 34.3 -28.315 -36.81 1 31.43 ? CF2 EU7 101 H 1 HETATM 7 C CF3 EU7 . . . V 3 34.234 -29.099 -34.438 1 28.38 ? CF3 EU7 101 H 1 HETATM 8 C CG1 EU7 . . . V 3 35.726 -27.806 -36.6 1 35.36 ? CG1 EU7 101 H 1 HETATM 9 C CG2 EU7 . . . V 3 33.532 -28.237 -35.483 1 43.78 ? CG2 EU7 101 H 1 HETATM 10 C CG3 EU7 . . . V 3 35.663 -28.593 -34.231 1 27.68 ? CG3 EU7 101 H 1 HETATM 11 H HE12 EU7 . . . V 3 36.912 -30.671 -35.366 1 50.31 ? HE12 EU7 101 H 1 HETATM 12 H HE11 EU7 . . . V 3 36.953 -30.173 -36.869 1 50.31 ? HE11 EU7 101 H 1 HETATM 13 H HE22 EU7 . . . V 3 33.434 -30.089 -37.418 1 50.55 ? HE22 EU7 101 H 1 HETATM 14 H HE21 EU7 . . . V 3 34.826 -29.819 -38.125 1 50.55 ? HE21 EU7 101 H 1 HETATM 15 H HE32 EU7 . . . V 3 33.368 -30.87 -35.053 1 54.9 ? HE32 EU7 101 H 1 HETATM 16 H HE31 EU7 . . . V 3 34.721 -31.097 -34.253 1 54.9 ? HE31 EU7 101 H 1 HETATM 17 H HF1 EU7 . . . V 3 37.33 -28.347 -35.409 1 33.2 ? HF1 EU7 101 H 1 HETATM 18 H HF2 EU7 . . . V 3 33.847 -27.764 -37.467 1 37.72 ? HF2 EU7 101 H 1 HETATM 19 H HF3 EU7 . . . V 3 33.749 -29.049 -33.599 1 34.06 ? HF3 EU7 101 H 1 HETATM 20 H HG12 EU7 . . . V 3 35.699 -26.886 -36.295 1 42.44 ? HG12 EU7 101 H 1 HETATM 21 H HG11 EU7 . . . V 3 36.213 -27.855 -37.437 1 42.44 ? HG11 EU7 101 H 1 HETATM 22 H HG22 EU7 . . . V 3 33.509 -27.316 -35.178 1 52.54 ? HG22 EU7 101 H 1 HETATM 23 H HG21 EU7 . . . V 3 32.628 -28.564 -35.615 1 52.54 ? HG21 EU7 101 H 1 HETATM 24 H HG32 EU7 . . . V 3 35.637 -27.672 -33.928 1 33.22 ? HG32 EU7 101 H 1 HETATM 25 H HG31 EU7 . . . V 3 36.107 -29.146 -33.569 1 33.22 ? HG31 EU7 101 H 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 12 _model_server_stats.query_time_ms 315 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 25 #