data_6US9 # _model_server_result.job_id TdbUb4-HG9z9MY4UiyBxOg _model_server_result.datetime_utc '2025-02-05 04:04:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6us9 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"W","auth_seq_id":101}' # _entry.id 6US9 # _exptl.entry_id 6US9 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 179.302 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description RIMANTADINE _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90.01 _cell.angle_gamma 90 _cell.entry_id 6US9 _cell.length_a 48.181 _cell.length_b 48.701 _cell.length_c 71.671 _cell.Z_PDB 32 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6US9 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall 'P 2yb' _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA tetrameric 4 author_and_software_defined_assembly 1 PISA tetrameric 4 author_and_software_defined_assembly 2 PISA tetrameric 4 author_and_software_defined_assembly 3 PISA tetrameric 4 author_and_software_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,C,D,Q,R,Y,Z,AA,BA 1 1 E,F,G,H,S,T,CA,DA,EA,FA 2 1 I,J,K,L,U,V,GA,HA,IA,JA 3 1 M,N,O,P,W,X,KA,LA,MA,NA 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 Q N N ? 2 T N N ? 2 U N N ? 2 W N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C LEU 26 A LEU 46 1_555 A N NH2 27 A NH2 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale2 B C LEU 26 B LEU 46 1_555 B N NH2 27 B NH2 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale3 C C LEU 26 C LEU 46 1_555 C N NH2 27 C NH2 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale4 D C LEU 26 D LEU 46 1_555 D N NH2 27 D NH2 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale5 E C LEU 26 E LEU 46 1_555 E N NH2 27 E NH2 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale6 F C LEU 26 F LEU 46 1_555 F N NH2 27 F NH2 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale7 G C LEU 26 G LEU 46 1_555 G N NH2 27 G NH2 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale8 H C LEU 26 H LEU 46 1_555 H N NH2 27 H NH2 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale9 I C LEU 26 I LEU 46 1_555 I N NH2 27 I NH2 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale10 J C LEU 26 J LEU 46 1_555 J N NH2 27 J NH2 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale11 K C LEU 26 K LEU 46 1_555 K N NH2 27 K NH2 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale12 L C LEU 26 L LEU 46 1_555 L N NH2 27 L NH2 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale13 M C LEU 26 M LEU 46 1_555 M N NH2 27 M NH2 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale14 N C LEU 26 N LEU 46 1_555 N N NH2 27 N NH2 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale15 O C LEU 26 O LEU 46 1_555 O N NH2 27 O NH2 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale16 P C LEU 26 P LEU 46 1_555 P N NH2 27 P NH2 47 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? # _chem_comp.formula 'C12 H21 N' _chem_comp.formula_weight 179.302 _chem_comp.id RIM _chem_comp.mon_nstd_flag . _chem_comp.name RIMANTADINE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 1-(1-ADAMANTYL)ETHANAMINE # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CA CB RIM sing 153 n n CA HA1 RIM sing 154 n n CA HA2 RIM sing 155 n n CA HA3 RIM sing 156 n n CB CD RIM sing 157 n n CB NC RIM sing 158 n n CB HB RIM sing 159 n n NC HNC1 RIM sing 160 n n NC HNC2 RIM sing 161 n n CD CE2 RIM sing 162 n n CD CE1 RIM sing 163 n n CD CE3 RIM sing 164 n n CE1 CF1 RIM sing 165 n n CE1 HE11 RIM sing 166 n n CE1 HE12 RIM sing 167 n n CE2 CF2 RIM sing 168 n n CE2 HE21 RIM sing 169 n n CE2 HE22 RIM sing 170 n n CE3 CF3 RIM sing 171 n n CE3 HE31 RIM sing 172 n n CE3 HE32 RIM sing 173 n n CF1 CG1 RIM sing 174 n n CF1 CG3 RIM sing 175 n n CF1 HF1 RIM sing 176 n n CF2 CG1 RIM sing 177 n n CF2 CG2 RIM sing 178 n n CF2 HF2 RIM sing 179 n n CF3 CG2 RIM sing 180 n n CF3 CG3 RIM sing 181 n n CF3 HF3 RIM sing 182 n n CG1 HG11 RIM sing 183 n n CG1 HG12 RIM sing 184 n n CG2 HG21 RIM sing 185 n n CG2 HG22 RIM sing 186 n n CG3 HG31 RIM sing 187 n n CG3 HG32 RIM sing 188 n n # _atom_sites.entry_id 6US9 _atom_sites.fract_transf_matrix[1][1] 0.020755 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000004 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.020533 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013953 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code Q 2 RIM A 1 101 101 RIM RIM . R 3 CL C 1 101 101 CL CL . S 3 CL F 1 101 101 CL CL . T 2 RIM F 1 102 102 RIM RIM . U 2 RIM I 1 101 101 RIM RIM . V 3 CL J 1 101 101 CL CL . W 2 RIM N 1 101 101 RIM RIM . X 3 CL P 1 101 101 CL CL . Y 4 HOH A 1 201 201 HOH HOH . Y 4 HOH A 2 202 202 HOH HOH . Y 4 HOH A 3 203 203 HOH HOH . Y 4 HOH A 4 204 204 HOH HOH . Y 4 HOH A 5 205 205 HOH HOH . Y 4 HOH A 6 206 206 HOH HOH . Y 4 HOH A 7 207 207 HOH HOH . Y 4 HOH A 8 208 208 HOH HOH . Z 4 HOH B 1 101 101 HOH HOH . AA 4 HOH C 1 201 201 HOH HOH . AA 4 HOH C 2 202 202 HOH HOH . BA 4 HOH D 1 101 101 HOH HOH . CA 4 HOH E 1 101 101 HOH HOH . DA 4 HOH F 1 201 201 HOH HOH . DA 4 HOH F 2 202 202 HOH HOH . DA 4 HOH F 3 203 203 HOH HOH . DA 4 HOH F 4 204 204 HOH HOH . DA 4 HOH F 5 205 205 HOH HOH . DA 4 HOH F 6 206 206 HOH HOH . EA 4 HOH G 1 101 101 HOH HOH . EA 4 HOH G 2 102 102 HOH HOH . EA 4 HOH G 3 103 103 HOH HOH . FA 4 HOH H 1 101 101 HOH HOH . FA 4 HOH H 2 102 102 HOH HOH . FA 4 HOH H 3 103 103 HOH HOH . GA 4 HOH I 1 201 201 HOH HOH . GA 4 HOH I 2 202 202 HOH HOH . GA 4 HOH I 3 203 203 HOH HOH . GA 4 HOH I 4 204 204 HOH HOH . GA 4 HOH I 5 205 205 HOH HOH . HA 4 HOH J 1 201 201 HOH HOH . IA 4 HOH K 1 101 101 HOH HOH . IA 4 HOH K 2 102 102 HOH HOH . JA 4 HOH L 1 101 101 HOH HOH . JA 4 HOH L 2 102 102 HOH HOH . JA 4 HOH L 3 103 103 HOH HOH . JA 4 HOH L 4 104 104 HOH HOH . KA 4 HOH M 1 101 101 HOH HOH . KA 4 HOH M 2 102 102 HOH HOH . KA 4 HOH M 3 103 103 HOH HOH . LA 4 HOH N 1 201 201 HOH HOH . LA 4 HOH N 2 202 202 HOH HOH . LA 4 HOH N 3 203 203 HOH HOH . LA 4 HOH N 4 204 204 HOH HOH . LA 4 HOH N 5 205 205 HOH HOH . LA 4 HOH N 6 206 206 HOH HOH . LA 4 HOH N 7 207 207 HOH HOH . LA 4 HOH N 8 208 208 HOH HOH . MA 4 HOH O 1 101 101 HOH HOH . NA 4 HOH P 1 201 201 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C CA RIM . A . W 2 74.578 -4.046 -3.468 0.3 20.06 ? CA RIM 101 N 1 HETATM 2 C CA RIM . C . W 2 71.838 -3.146 -3.446 0.38 19.54 ? CA RIM 101 N 1 HETATM 3 C CA RIM . D . W 2 72.019 -4.409 -3.307 0.32 19.47 ? CA RIM 101 N 1 HETATM 4 C CB RIM . A . W 2 73.183 -3.662 -3.962 0.3 18.83 ? CB RIM 101 N 1 HETATM 5 C CB RIM . C . W 2 73.183 -3.662 -3.962 0.38 18.58 ? CB RIM 101 N 1 HETATM 6 C CB RIM . D . W 2 73.183 -3.662 -3.962 0.32 18.78 ? CB RIM 101 N 1 HETATM 7 N NC RIM . A . W 2 72.91 -2.26 -3.617 0.3 20.76 ? NC RIM 101 N 1 HETATM 8 N NC RIM . C . W 2 73.486 -4.953 -3.33 0.38 19.13 ? NC RIM 101 N 1 HETATM 9 N NC RIM . D . W 2 74.454 -4.202 -3.462 0.32 20.07 ? NC RIM 101 N 1 HETATM 10 C CD RIM . A . W 2 73.113 -3.838 -5.479 0.3 19.97 ? CD RIM 101 N 1 HETATM 11 C CD RIM . C . W 2 73.113 -3.838 -5.479 0.38 20.08 ? CD RIM 101 N 1 HETATM 12 C CD RIM . D . W 2 73.113 -3.838 -5.479 0.32 19.98 ? CD RIM 101 N 1 HETATM 13 C CE1 RIM . A . W 2 74.391 -3.29 -6.115 0.3 20.01 ? CE1 RIM 101 N 1 HETATM 14 C CE1 RIM . C . W 2 74.391 -3.29 -6.115 0.38 20.34 ? CE1 RIM 101 N 1 HETATM 15 C CE1 RIM . D . W 2 74.391 -3.29 -6.115 0.32 20.09 ? CE1 RIM 101 N 1 HETATM 16 C CE2 RIM . A . W 2 72.975 -5.326 -5.813 0.3 20.05 ? CE2 RIM 101 N 1 HETATM 17 C CE2 RIM . C . W 2 72.975 -5.326 -5.813 0.38 20.44 ? CE2 RIM 101 N 1 HETATM 18 C CE2 RIM . D . W 2 72.975 -5.326 -5.813 0.32 20.15 ? CE2 RIM 101 N 1 HETATM 19 C CE3 RIM . A . W 2 71.905 -3.077 -6.026 0.3 20.17 ? CE3 RIM 101 N 1 HETATM 20 C CE3 RIM . C . W 2 71.905 -3.077 -6.026 0.38 20.51 ? CE3 RIM 101 N 1 HETATM 21 C CE3 RIM . D . W 2 71.905 -3.077 -6.026 0.32 20.26 ? CE3 RIM 101 N 1 HETATM 22 C CF1 RIM . A . W 2 74.322 -3.468 -7.633 0.3 18.56 ? CF1 RIM 101 N 1 HETATM 23 C CF1 RIM . C . W 2 74.322 -3.468 -7.633 0.38 18.48 ? CF1 RIM 101 N 1 HETATM 24 C CF1 RIM . D . W 2 74.322 -3.468 -7.633 0.32 18.54 ? CF1 RIM 101 N 1 HETATM 25 C CF2 RIM . A . W 2 72.905 -5.502 -7.332 0.3 18.86 ? CF2 RIM 101 N 1 HETATM 26 C CF2 RIM . C . W 2 72.905 -5.502 -7.332 0.38 18.92 ? CF2 RIM 101 N 1 HETATM 27 C CF2 RIM . D . W 2 72.905 -5.502 -7.332 0.32 18.88 ? CF2 RIM 101 N 1 HETATM 28 C CF3 RIM . A . W 2 71.836 -3.254 -7.545 0.3 19.1 ? CF3 RIM 101 N 1 HETATM 29 C CF3 RIM . C . W 2 71.836 -3.254 -7.545 0.38 19.17 ? CF3 RIM 101 N 1 HETATM 30 C CF3 RIM . D . W 2 71.836 -3.254 -7.545 0.32 19.12 ? CF3 RIM 101 N 1 HETATM 31 C CG1 RIM . A . W 2 74.184 -4.953 -7.969 0.3 18.93 ? CG1 RIM 101 N 1 HETATM 32 C CG1 RIM . C . W 2 74.184 -4.953 -7.969 0.38 19.1 ? CG1 RIM 101 N 1 HETATM 33 C CG1 RIM . D . W 2 74.184 -4.953 -7.969 0.32 18.97 ? CG1 RIM 101 N 1 HETATM 34 C CG2 RIM . A . W 2 71.695 -4.741 -7.878 0.3 18.81 ? CG2 RIM 101 N 1 HETATM 35 C CG2 RIM . C . W 2 71.695 -4.741 -7.878 0.38 18.87 ? CG2 RIM 101 N 1 HETATM 36 C CG2 RIM . D . W 2 71.695 -4.741 -7.878 0.32 18.82 ? CG2 RIM 101 N 1 HETATM 37 C CG3 RIM . A . W 2 73.114 -2.706 -8.181 0.3 18.49 ? CG3 RIM 101 N 1 HETATM 38 C CG3 RIM . C . W 2 73.114 -2.706 -8.181 0.38 18.42 ? CG3 RIM 101 N 1 HETATM 39 C CG3 RIM . D . W 2 73.114 -2.706 -8.181 0.32 18.48 ? CG3 RIM 101 N 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 367 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 39 #