data_6USV # _model_server_result.job_id V_CeqeKxSQSEsZsRmGXilw _model_server_result.datetime_utc '2024-11-16 21:21:36' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6usv # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":301}' # _entry.id 6USV # _exptl.entry_id 6USV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 420.181 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "(2S)-2-amino-3-[2',4'-dichloro-4-hydroxy-5-(phosphonomethyl)biphenyl-3-yl]propanoic acid" _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6USV _cell.length_a 59.281 _cell.length_b 85.131 _cell.length_c 121.675 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6USV _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 4 _struct_asym.id D _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 28 A CYS 28 1_555 A SG CYS 62 A CYS 62 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.034 ? disulf ? disulf2 A SG CYS 44 A CYS 44 1_555 A SG CYS 63 A CYS 63 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.064 ? disulf ? disulf3 B SG CYS 29 B CYS 32 1_555 B SG CYS 55 B CYS 58 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? disulf ? disulf4 B SG CYS 36 B CYS 39 1_555 B SG CYS 56 B CYS 59 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf5 B SG CYS 226 B CYS 229 1_555 B SG CYS 281 B CYS 284 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.047 ? # _chem_comp.formula 'C16 H16 Cl2 N O6 P' _chem_comp.formula_weight 420.181 _chem_comp.id QGP _chem_comp.mon_nstd_flag . _chem_comp.name "(2S)-2-amino-3-[2',4'-dichloro-4-hydroxy-5-(phosphonomethyl)biphenyl-3-yl]propanoic acid" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O4 P QGP doub 290 n n O3 P QGP sing 291 n n O C QGP doub 292 n n O5 P QGP sing 293 n n P C1 QGP sing 294 n n C16 C9 QGP sing 295 n n C16 CA QGP sing 296 n n O6 C4 QGP sing 297 n n C CA QGP sing 298 n n C O2 QGP sing 299 n n C9 C4 QGP doub 300 n y C9 C8 QGP sing 301 n y C4 C5 QGP sing 302 n y C8 C7 QGP doub 303 n y C13 C14 QGP doub 304 n y C13 C12 QGP sing 305 n y C5 C1 QGP sing 306 n n C5 C6 QGP doub 307 n y CA N QGP sing 308 n n C14 C11 QGP sing 309 n y C7 C6 QGP sing 310 n y C7 C12 QGP sing 311 n n C12 C10 QGP doub 312 n y C11 CL6 QGP sing 313 n n C11 C15 QGP doub 314 n y C10 C15 QGP sing 315 n y C10 CL0 QGP sing 316 n n C6 H1 QGP sing 317 n n C8 H2 QGP sing 318 n n C13 H4 QGP sing 319 n n O2 H5 QGP sing 320 n n C14 H6 QGP sing 321 n n C15 H7 QGP sing 322 n n C16 H8 QGP sing 323 n n C16 H9 QGP sing 324 n n CA H10 QGP sing 325 n n N H11 QGP sing 326 n n N H12 QGP sing 327 n n O3 H14 QGP sing 328 n n O5 H15 QGP sing 329 n n C1 H16 QGP sing 330 n n C1 H17 QGP sing 331 n n O6 H3 QGP sing 332 n n # _atom_sites.entry_id 6USV _atom_sites.fract_transf_matrix[1][1] 0.016869 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011747 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008219 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GLY A 1 901 901 GLY GLY . D 4 QGP B 1 301 1 QGP SDZ . E 5 GOL B 1 302 1 GOL GOL . F 6 HOH A 1 1001 20 HOH HOH . F 6 HOH A 2 1002 13 HOH HOH . F 6 HOH A 3 1003 14 HOH HOH . F 6 HOH A 4 1004 66 HOH HOH . F 6 HOH A 5 1005 24 HOH HOH . F 6 HOH A 6 1006 65 HOH HOH . F 6 HOH A 7 1007 8 HOH HOH . F 6 HOH A 8 1008 32 HOH HOH . F 6 HOH A 9 1009 63 HOH HOH . F 6 HOH A 10 1010 28 HOH HOH . F 6 HOH A 11 1011 29 HOH HOH . F 6 HOH A 12 1012 11 HOH HOH . F 6 HOH A 13 1013 75 HOH HOH . F 6 HOH A 14 1014 22 HOH HOH . F 6 HOH A 15 1015 64 HOH HOH . F 6 HOH A 16 1016 37 HOH HOH . F 6 HOH A 17 1017 9 HOH HOH . F 6 HOH A 18 1018 76 HOH HOH . F 6 HOH A 19 1019 49 HOH HOH . F 6 HOH A 20 1020 12 HOH HOH . F 6 HOH A 21 1021 69 HOH HOH . F 6 HOH A 22 1022 23 HOH HOH . F 6 HOH A 23 1023 17 HOH HOH . F 6 HOH A 24 1024 67 HOH HOH . F 6 HOH A 25 1025 62 HOH HOH . F 6 HOH A 26 1026 58 HOH HOH . F 6 HOH A 27 1027 74 HOH HOH . F 6 HOH A 28 1028 77 HOH HOH . G 6 HOH B 1 401 47 HOH HOH . G 6 HOH B 2 402 6 HOH HOH . G 6 HOH B 3 403 4 HOH HOH . G 6 HOH B 4 404 48 HOH HOH . G 6 HOH B 5 405 1 HOH HOH . G 6 HOH B 6 406 16 HOH HOH . G 6 HOH B 7 407 34 HOH HOH . G 6 HOH B 8 408 50 HOH HOH . G 6 HOH B 9 409 7 HOH HOH . G 6 HOH B 10 410 5 HOH HOH . G 6 HOH B 11 411 87 HOH HOH . G 6 HOH B 12 412 85 HOH HOH . G 6 HOH B 13 413 38 HOH HOH . G 6 HOH B 14 414 82 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 QGP . . . D 4 -8.29 18.571 -51.678 1 42.2 ? C4 QGP 301 B 1 HETATM 2 C C5 QGP . . . D 4 -7.651 19.766 -51.334 1 39.39 ? C5 QGP 301 B 1 HETATM 3 C C6 QGP . . . D 4 -6.323 19.75 -51.025 1 38.48 ? C6 QGP 301 B 1 HETATM 4 C C7 QGP . . . D 4 -5.579 18.596 -51.045 1 41.39 ? C7 QGP 301 B 1 HETATM 5 C C8 QGP . . . D 4 -6.183 17.384 -51.399 1 38.54 ? C8 QGP 301 B 1 HETATM 6 C C9 QGP . . . D 4 -7.565 17.331 -51.717 1 39.86 ? C9 QGP 301 B 1 HETATM 7 C C10 QGP . . . D 4 -3.339 18.015 -49.837 1 51.95 ? C10 QGP 301 B 1 HETATM 8 C C11 QGP . . . D 4 -1.394 19.388 -50.224 1 61.49 ? C11 QGP 301 B 1 HETATM 9 C C12 QGP . . . D 4 -4.097 18.799 -50.709 1 47.03 ? C12 QGP 301 B 1 HETATM 10 C C13 QGP . . . D 4 -3.489 19.883 -51.335 1 42.2 ? C13 QGP 301 B 1 HETATM 11 O O2 QGP . . . D 4 -10.373 13.523 -51.026 1 46.24 ? O2 QGP 301 B 1 HETATM 12 C C14 QGP . . . D 4 -2.147 20.175 -51.094 1 61.45 ? C14 QGP 301 B 1 HETATM 13 C C15 QGP . . . D 4 -2 18.303 -49.602 1 51.43 ? C15 QGP 301 B 1 HETATM 14 C C16 QGP . . . D 4 -8.225 16.017 -52.098 1 35.56 ? C16 QGP 301 B 1 HETATM 15 C CA QGP . . . D 4 -9.424 15.658 -51.236 1 35.14 ? CA QGP 301 B 1 HETATM 16 N N QGP . . . D 4 -9.002 15.358 -49.916 1 39.72 ? N QGP 301 B 1 HETATM 17 C C QGP . . . D 4 -10.278 14.534 -51.798 1 39 ? C QGP 301 B 1 HETATM 18 O O QGP . . . D 4 -10.722 14.809 -52.942 1 38.21 ? O QGP 301 B 1 HETATM 19 O O3 QGP . . . D 4 -9.751 20.879 -53.69 1 40.52 ? O3 QGP 301 B 1 HETATM 20 P P QGP . . . D 4 -8.919 21.769 -52.848 1 43.33 ? P QGP 301 B 1 HETATM 21 O O4 QGP . . . D 4 -7.901 21.906 -54.041 1 42.44 ? O4 QGP 301 B 1 HETATM 22 O O5 QGP . . . D 4 -10.053 22.893 -52.907 1 37.4 ? O5 QGP 301 B 1 HETATM 23 C C1 QGP . . . D 4 -8.38 21.1 -51.25 1 39.05 ? C1 QGP 301 B 1 HETATM 24 O O6 QGP . . . D 4 -9.477 18.617 -51.939 1 33.4 ? O6 QGP 301 B 1 HETATM 25 CL CL0 QGP . . . D 4 -4.008 16.653 -48.997 1 69.79 ? CL0 QGP 301 B 1 HETATM 26 CL CL6 QGP . . . D 4 0.299 19.749 -49.914 1 86.96 ? CL6 QGP 301 B 1 # _model_server_stats.io_time_ms 53 _model_server_stats.parse_time_ms 29 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 310 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 26 #