data_6UVD # _model_server_result.job_id yeQuSEBlf7NhBnI8jK8bOA _model_server_result.datetime_utc '2024-11-26 07:16:31' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6uvd # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":306}' # _entry.id 6UVD # _exptl.entry_id 6UVD _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 11 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6UVD _cell.length_a 97.149 _cell.length_b 97.149 _cell.length_c 74.235 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6UVD _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N ? 4 K N N ? 4 L N N ? 4 N N N ? 4 O N N ? 4 P N N ? 4 Q N N ? 4 R N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 83 n n C1 C2 EDO sing 84 n n C1 H11 EDO sing 85 n n C1 H12 EDO sing 86 n n O1 HO1 EDO sing 87 n n C2 O2 EDO sing 88 n n C2 H21 EDO sing 89 n n C2 H22 EDO sing 90 n n O2 HO2 EDO sing 91 n n # _atom_sites.entry_id 6UVD _atom_sites.fract_transf_matrix[1][1] 0.010293 _atom_sites.fract_transf_matrix[1][2] 0.005943 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011886 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013471 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 XOU A 1 301 1 XOU LIG . D 3 SO4 A 1 302 1 SO4 SO4 . E 3 SO4 A 1 303 2 SO4 SO4 . F 3 SO4 A 1 304 3 SO4 SO4 . G 4 EDO A 1 305 1 EDO EDO . H 4 EDO A 1 306 4 EDO EDO . I 4 EDO A 1 307 8 EDO EDO . J 4 EDO A 1 308 9 EDO EDO . K 4 EDO A 1 309 10 EDO EDO . L 4 EDO A 1 310 11 EDO EDO . M 2 XOU B 1 301 2 XOU LIG . N 4 EDO B 1 302 2 EDO EDO . O 4 EDO B 1 303 3 EDO EDO . P 4 EDO B 1 304 5 EDO EDO . Q 4 EDO B 1 305 6 EDO EDO . R 4 EDO B 1 306 7 EDO EDO . S 5 HOH A 1 401 47 HOH HOH . S 5 HOH A 2 402 46 HOH HOH . S 5 HOH A 3 403 95 HOH HOH . S 5 HOH A 4 404 51 HOH HOH . S 5 HOH A 5 405 21 HOH HOH . S 5 HOH A 6 406 66 HOH HOH . S 5 HOH A 7 407 39 HOH HOH . S 5 HOH A 8 408 71 HOH HOH . S 5 HOH A 9 409 56 HOH HOH . S 5 HOH A 10 410 97 HOH HOH . S 5 HOH A 11 411 53 HOH HOH . S 5 HOH A 12 412 57 HOH HOH . S 5 HOH A 13 413 102 HOH HOH . S 5 HOH A 14 414 37 HOH HOH . S 5 HOH A 15 415 93 HOH HOH . S 5 HOH A 16 416 20 HOH HOH . S 5 HOH A 17 417 67 HOH HOH . S 5 HOH A 18 418 4 HOH HOH . S 5 HOH A 19 419 80 HOH HOH . S 5 HOH A 20 420 62 HOH HOH . S 5 HOH A 21 421 2 HOH HOH . S 5 HOH A 22 422 41 HOH HOH . S 5 HOH A 23 423 31 HOH HOH . S 5 HOH A 24 424 24 HOH HOH . S 5 HOH A 25 425 100 HOH HOH . S 5 HOH A 26 426 74 HOH HOH . S 5 HOH A 27 427 89 HOH HOH . S 5 HOH A 28 428 5 HOH HOH . S 5 HOH A 29 429 96 HOH HOH . S 5 HOH A 30 430 35 HOH HOH . S 5 HOH A 31 431 82 HOH HOH . S 5 HOH A 32 432 26 HOH HOH . S 5 HOH A 33 433 84 HOH HOH . S 5 HOH A 34 434 29 HOH HOH . S 5 HOH A 35 435 16 HOH HOH . S 5 HOH A 36 436 68 HOH HOH . S 5 HOH A 37 437 44 HOH HOH . S 5 HOH A 38 438 99 HOH HOH . S 5 HOH A 39 439 40 HOH HOH . S 5 HOH A 40 440 17 HOH HOH . S 5 HOH A 41 441 28 HOH HOH . S 5 HOH A 42 442 50 HOH HOH . S 5 HOH A 43 443 103 HOH HOH . S 5 HOH A 44 444 27 HOH HOH . S 5 HOH A 45 445 75 HOH HOH . S 5 HOH A 46 446 60 HOH HOH . S 5 HOH A 47 447 9 HOH HOH . S 5 HOH A 48 448 107 HOH HOH . S 5 HOH A 49 449 1 HOH HOH . S 5 HOH A 50 450 25 HOH HOH . S 5 HOH A 51 451 34 HOH HOH . S 5 HOH A 52 452 64 HOH HOH . S 5 HOH A 53 453 111 HOH HOH . S 5 HOH A 54 454 63 HOH HOH . S 5 HOH A 55 455 19 HOH HOH . S 5 HOH A 56 456 38 HOH HOH . S 5 HOH A 57 457 32 HOH HOH . S 5 HOH A 58 458 33 HOH HOH . S 5 HOH A 59 459 70 HOH HOH . S 5 HOH A 60 460 61 HOH HOH . S 5 HOH A 61 461 101 HOH HOH . S 5 HOH A 62 462 45 HOH HOH . S 5 HOH A 63 463 42 HOH HOH . S 5 HOH A 64 464 105 HOH HOH . S 5 HOH A 65 465 108 HOH HOH . S 5 HOH A 66 466 92 HOH HOH . S 5 HOH A 67 467 49 HOH HOH . S 5 HOH A 68 468 48 HOH HOH . S 5 HOH A 69 469 91 HOH HOH . T 5 HOH B 1 401 7 HOH HOH . T 5 HOH B 2 402 54 HOH HOH . T 5 HOH B 3 403 30 HOH HOH . T 5 HOH B 4 404 18 HOH HOH . T 5 HOH B 5 405 10 HOH HOH . T 5 HOH B 6 406 94 HOH HOH . T 5 HOH B 7 407 15 HOH HOH . T 5 HOH B 8 408 85 HOH HOH . T 5 HOH B 9 409 87 HOH HOH . T 5 HOH B 10 410 14 HOH HOH . T 5 HOH B 11 411 104 HOH HOH . T 5 HOH B 12 412 11 HOH HOH . T 5 HOH B 13 413 76 HOH HOH . T 5 HOH B 14 414 36 HOH HOH . T 5 HOH B 15 415 90 HOH HOH . T 5 HOH B 16 416 72 HOH HOH . T 5 HOH B 17 417 6 HOH HOH . T 5 HOH B 18 418 8 HOH HOH . T 5 HOH B 19 419 12 HOH HOH . T 5 HOH B 20 420 86 HOH HOH . T 5 HOH B 21 421 83 HOH HOH . T 5 HOH B 22 422 13 HOH HOH . T 5 HOH B 23 423 52 HOH HOH . T 5 HOH B 24 424 79 HOH HOH . T 5 HOH B 25 425 3 HOH HOH . T 5 HOH B 26 426 77 HOH HOH . T 5 HOH B 27 427 69 HOH HOH . T 5 HOH B 28 428 22 HOH HOH . T 5 HOH B 29 429 109 HOH HOH . T 5 HOH B 30 430 23 HOH HOH . T 5 HOH B 31 431 58 HOH HOH . T 5 HOH B 32 432 88 HOH HOH . T 5 HOH B 33 433 81 HOH HOH . T 5 HOH B 34 434 59 HOH HOH . T 5 HOH B 35 435 55 HOH HOH . T 5 HOH B 36 436 78 HOH HOH . T 5 HOH B 37 437 98 HOH HOH . T 5 HOH B 38 438 73 HOH HOH . T 5 HOH B 39 439 65 HOH HOH . T 5 HOH B 40 440 110 HOH HOH . T 5 HOH B 41 441 43 HOH HOH . T 5 HOH B 42 442 106 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . H 4 36.386 -53.747 -47.418 1 70.38 ? C1 EDO 306 A 1 HETATM 2 O O1 EDO . . . H 4 36.759 -55.117 -47.404 1 72.04 ? O1 EDO 306 A 1 HETATM 3 C C2 EDO . . . H 4 36.032 -53.257 -48.846 1 68.89 ? C2 EDO 306 A 1 HETATM 4 O O2 EDO . . . H 4 35.557 -51.914 -48.78 1 67.83 ? O2 EDO 306 A 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 337 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #