data_6UW2
#
_model_server_result.job_id            LjfNEoTUSz22sYQ-iuM_1Q 
_model_server_result.datetime_utc      '2024-10-14 03:20:02' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6uw2 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"Q","auth_seq_id":501}' 
#
_entry.id    6UW2 
#
_exptl.entry_id    6UW2 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              616.487 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'PROTOPORPHYRIN IX CONTAINING FE' 
_entity.pdbx_number_of_molecules    6 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6UW2 
_cell.length_a            117.98 
_cell.length_b            177.22 
_cell.length_c            181.52 
_cell.Z_PDB               24 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6UW2 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        19 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 21 21 21' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
? monomeric 1 author_defined_assembly 3 
? monomeric 1 author_defined_assembly 4 
? monomeric 1 author_defined_assembly 5 
? monomeric 1 author_defined_assembly 6 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,G,H,V 1 1 
B,I,J,K,W 2 1 
C,L,M,N,X 3 1 
D,O,P,Y 4 1 
E,Q,R,Z 5 1 
F,S,T,U,AA 6 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 G N N 
? 2 I N N 
? 2 L N N 
? 2 O N N 
? 2 Q N N 
? 2 S N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A SG CYS 402 A CYS 434 1_555 G FE HEM . A HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.304 ? 
metalc ? metalc2 G FE HEM . A HEM 501 1_555 H NAN CL6 . A CL6 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.203 ? 
metalc ? metalc3 B SG CYS 402 B CYS 434 1_555 I FE HEM . B HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.158 ? 
metalc ? metalc4 I FE HEM . B HEM 501 1_555 J NAN CL6 . B CL6 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.127 ? 
metalc ? metalc5 C SG CYS 402 C CYS 434 1_555 L FE HEM . C HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.251 ? 
metalc ? metalc6 L FE HEM . C HEM 501 1_555 M NAN CL6 . C CL6 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.132 ? 
metalc ? metalc7 D SG CYS 402 D CYS 434 1_555 O FE HEM . D HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.137 ? 
metalc ? metalc8 O FE HEM . D HEM 501 1_555 P NAN CL6 . D CL6 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.105 ? 
metalc ? metalc9 E SG CYS 402 E CYS 434 1_555 Q FE HEM . E HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.371 ? 
metalc ? metalc10 Q FE HEM . E HEM 501 1_555 R NAN CL6 . E CL6 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.145 ? 
metalc ? metalc11 F SG CYS 402 F CYS 434 1_555 S FE HEM . F HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.528 ? 
metalc ? metalc12 S FE HEM . F HEM 501 1_555 T NAN CL6 . F CL6 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.165 ? 
#
_chem_comp.formula           'C34 H32 Fe N4 O4' 
_chem_comp.formula_weight    616.487 
_chem_comp.id                HEM 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'PROTOPORPHYRIN IX CONTAINING FE' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     HEME 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CHA C1A HEM sing 182 n n 
CHA C4D HEM doub 183 n n 
CHA HHA HEM sing 184 n n 
CHB C4A HEM sing 185 n n 
CHB C1B HEM doub 186 n n 
CHB HHB HEM sing 187 n n 
CHC C4B HEM sing 188 n n 
CHC C1C HEM doub 189 n n 
CHC HHC HEM sing 190 n n 
CHD C4C HEM doub 191 n n 
CHD C1D HEM sing 192 n n 
CHD HHD HEM sing 193 n n 
C1A C2A HEM doub 194 n y 
C1A NA HEM sing 195 n y 
C2A C3A HEM sing 196 n y 
C2A CAA HEM sing 197 n n 
C3A C4A HEM doub 198 n y 
C3A CMA HEM sing 199 n n 
C4A NA HEM sing 200 n y 
CMA HMA HEM sing 201 n n 
CMA HMAA HEM sing 202 n n 
CMA HMAB HEM sing 203 n n 
CAA CBA HEM sing 204 n n 
CAA HAA HEM sing 205 n n 
CAA HAAA HEM sing 206 n n 
CBA CGA HEM sing 207 n n 
CBA HBA HEM sing 208 n n 
CBA HBAA HEM sing 209 n n 
CGA O1A HEM doub 210 n n 
CGA O2A HEM sing 211 n n 
C1B C2B HEM sing 212 n n 
C1B NB HEM sing 213 n n 
C2B C3B HEM doub 214 n n 
C2B CMB HEM sing 215 n n 
C3B C4B HEM sing 216 n n 
C3B CAB HEM sing 217 n n 
C4B NB HEM doub 218 n n 
CMB HMB HEM sing 219 n n 
CMB HMBA HEM sing 220 n n 
CMB HMBB HEM sing 221 n n 
CAB CBB HEM doub 222 n n 
CAB HAB HEM sing 223 n n 
CBB HBB HEM sing 224 n n 
CBB HBBA HEM sing 225 n n 
C1C C2C HEM sing 226 n y 
C1C NC HEM sing 227 n y 
C2C C3C HEM doub 228 n y 
C2C CMC HEM sing 229 n n 
C3C C4C HEM sing 230 n y 
C3C CAC HEM sing 231 n n 
C4C NC HEM sing 232 n y 
CMC HMC HEM sing 233 n n 
CMC HMCA HEM sing 234 n n 
CMC HMCB HEM sing 235 n n 
CAC CBC HEM doub 236 n n 
CAC HAC HEM sing 237 n n 
CBC HBC HEM sing 238 n n 
CBC HBCA HEM sing 239 n n 
C1D C2D HEM sing 240 n n 
C1D ND HEM doub 241 n n 
C2D C3D HEM doub 242 n n 
C2D CMD HEM sing 243 n n 
C3D C4D HEM sing 244 n n 
C3D CAD HEM sing 245 n n 
C4D ND HEM sing 246 n n 
CMD HMD HEM sing 247 n n 
CMD HMDA HEM sing 248 n n 
CMD HMDB HEM sing 249 n n 
CAD CBD HEM sing 250 n n 
CAD HAD HEM sing 251 n n 
CAD HADA HEM sing 252 n n 
CBD CGD HEM sing 253 n n 
CBD HBD HEM sing 254 n n 
CBD HBDA HEM sing 255 n n 
CGD O1D HEM doub 256 n n 
CGD O2D HEM sing 257 n n 
O2A H2A HEM sing 258 n n 
O2D H2D HEM sing 259 n n 
FE NA HEM sing 260 n n 
FE NB HEM sing 261 n n 
FE NC HEM sing 262 n n 
FE ND HEM sing 263 n n 
#
_atom_sites.entry_id                     6UW2 
_atom_sites.fract_transf_matrix[1][1]    0.008476 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.005643 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.005509 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 2 HEM A 1 501 500 HEM HEM . 
H 3 CL6 A 1 502 510 CL6 CL6 . 
I 2 HEM B 1 501 500 HEM HEM . 
J 3 CL6 B 1 502 510 CL6 CL6 . 
K 4 GAI B 1 503 3 GAI GAI . 
L 2 HEM C 1 501 500 HEM HEM . 
M 3 CL6 C 1 502 510 CL6 CL6 . 
N 4 GAI C 1 503 2 GAI GAI . 
O 2 HEM D 1 501 500 HEM HEM . 
P 3 CL6 D 1 502 510 CL6 CL6 . 
Q 2 HEM E 1 501 500 HEM HEM . 
R 3 CL6 E 1 502 510 CL6 CL6 . 
S 2 HEM F 1 501 500 HEM HEM . 
T 3 CL6 F 1 502 510 CL6 CL6 . 
U 4 GAI F 1 503 6 GAI GAI . 
V 5 HOH A 1 601 13 HOH HOH . 
V 5 HOH A 2 602 11 HOH HOH . 
V 5 HOH A 3 603 25 HOH HOH . 
V 5 HOH A 4 604 26 HOH HOH . 
W 5 HOH B 1 601 1 HOH HOH . 
W 5 HOH B 2 602 30 HOH HOH . 
W 5 HOH B 3 603 29 HOH HOH . 
W 5 HOH B 4 604 27 HOH HOH . 
W 5 HOH B 5 605 31 HOH HOH . 
W 5 HOH B 6 606 28 HOH HOH . 
W 5 HOH B 7 607 35 HOH HOH . 
W 5 HOH B 8 608 32 HOH HOH . 
W 5 HOH B 9 609 33 HOH HOH . 
W 5 HOH B 10 610 23 HOH HOH . 
X 5 HOH C 1 601 18 HOH HOH . 
X 5 HOH C 2 602 37 HOH HOH . 
X 5 HOH C 3 603 36 HOH HOH . 
X 5 HOH C 4 604 42 HOH HOH . 
X 5 HOH C 5 605 41 HOH HOH . 
X 5 HOH C 6 606 38 HOH HOH . 
X 5 HOH C 7 607 43 HOH HOH . 
X 5 HOH C 8 608 7 HOH HOH . 
X 5 HOH C 9 609 51 HOH HOH . 
X 5 HOH C 10 610 44 HOH HOH . 
X 5 HOH C 11 611 39 HOH HOH . 
X 5 HOH C 12 612 40 HOH HOH . 
Y 5 HOH D 1 601 17 HOH HOH . 
Y 5 HOH D 2 602 54 HOH HOH . 
Y 5 HOH D 3 603 52 HOH HOH . 
Y 5 HOH D 4 604 50 HOH HOH . 
Y 5 HOH D 5 605 6 HOH HOH . 
Y 5 HOH D 6 606 45 HOH HOH . 
Y 5 HOH D 7 607 53 HOH HOH . 
Y 5 HOH D 8 608 48 HOH HOH . 
Y 5 HOH D 9 609 47 HOH HOH . 
Z 5 HOH E 1 601 56 HOH HOH . 
Z 5 HOH E 2 602 55 HOH HOH . 
Z 5 HOH E 3 603 46 HOH HOH . 
Z 5 HOH E 4 604 34 HOH HOH . 
AA 5 HOH F 1 601 61 HOH HOH . 
AA 5 HOH F 2 602 62 HOH HOH . 
AA 5 HOH F 3 603 59 HOH HOH . 
AA 5 HOH F 4 604 60 HOH HOH . 
AA 5 HOH F 5 605 58 HOH HOH . 
AA 5 HOH F 6 606 63 HOH HOH . 
AA 5 HOH F 7 607 64 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CHA HEM . . . Q 2 26.043 -31.633 -76.46 1 59.19 ? CHA HEM 501 E 1 
HETATM 2 C CHB HEM . . . Q 2 23.567 -35.726 -76.152 1 58.39 ? CHB HEM 501 E 1 
HETATM 3 C CHC HEM . . . Q 2 27.087 -38.047 -78.491 1 61.75 ? CHC HEM 501 E 1 
HETATM 4 C CHD HEM . . . Q 2 29.708 -33.999 -78.538 1 61.03 ? CHD HEM 501 E 1 
HETATM 5 C C1A HEM . . . Q 2 25.062 -32.552 -76.211 1 58.5 ? C1A HEM 501 E 1 
HETATM 6 C C2A HEM . . . Q 2 23.834 -32.244 -75.586 1 59.88 ? C2A HEM 501 E 1 
HETATM 7 C C3A HEM . . . Q 2 23.128 -33.397 -75.504 1 59.18 ? C3A HEM 501 E 1 
HETATM 8 C C4A HEM . . . Q 2 23.939 -34.417 -76.053 1 57.29 ? C4A HEM 501 E 1 
HETATM 9 C CMA HEM . . . Q 2 21.741 -33.584 -74.922 1 57.38 ? CMA HEM 501 E 1 
HETATM 10 C CAA HEM . . . Q 2 23.347 -30.879 -75.164 1 63.32 ? CAA HEM 501 E 1 
HETATM 11 C CBA HEM . . . Q 2 23.774 -30.428 -73.772 1 67.77 ? CBA HEM 501 E 1 
HETATM 12 C CGA HEM . . . Q 2 23.207 -29.049 -73.539 1 70.01 ? CGA HEM 501 E 1 
HETATM 13 O O1A HEM . . . Q 2 23.91 -28.197 -72.95 1 71.76 ? O1A HEM 501 E 1 
HETATM 14 O O2A HEM . . . Q 2 22.051 -28.73 -73.939 1 64.3 ? O2A HEM 501 E 1 
HETATM 15 C C1B HEM . . . Q 2 24.303 -36.728 -76.783 1 58.32 ? C1B HEM 501 E 1 
HETATM 16 C C2B HEM . . . Q 2 23.843 -38.077 -76.933 1 60.37 ? C2B HEM 501 E 1 
HETATM 17 C C3B HEM . . . Q 2 24.821 -38.773 -77.603 1 60.85 ? C3B HEM 501 E 1 
HETATM 18 C C4B HEM . . . Q 2 25.891 -37.76 -77.836 1 59.83 ? C4B HEM 501 E 1 
HETATM 19 C CMB HEM . . . Q 2 22.528 -38.637 -76.434 1 60.99 ? CMB HEM 501 E 1 
HETATM 20 C CAB HEM . . . Q 2 24.89 -40.213 -78.027 1 65.14 ? CAB HEM 501 E 1 
HETATM 21 C CBB HEM . . . Q 2 23.964 -41.166 -77.83 1 68.09 ? CBB HEM 501 E 1 
HETATM 22 C C1C HEM . . . Q 2 28.131 -37.158 -78.72 1 60.56 ? C1C HEM 501 E 1 
HETATM 23 C C2C HEM . . . Q 2 29.371 -37.488 -79.295 1 64.16 ? C2C HEM 501 E 1 
HETATM 24 C C3C HEM . . . Q 2 30.14 -36.325 -79.321 1 65.51 ? C3C HEM 501 E 1 
HETATM 25 C C4C HEM . . . Q 2 29.326 -35.302 -78.736 1 61.29 ? C4C HEM 501 E 1 
HETATM 26 C CMC HEM . . . Q 2 29.75 -38.859 -79.812 1 67.46 ? CMC HEM 501 E 1 
HETATM 27 C CAC HEM . . . Q 2 31.534 -36.118 -79.808 1 70.37 ? CAC HEM 501 E 1 
HETATM 28 C CBC HEM . . . Q 2 32.385 -37.057 -80.233 1 73.66 ? CBC HEM 501 E 1 
HETATM 29 C C1D HEM . . . Q 2 28.876 -33.032 -77.96 1 62.46 ? C1D HEM 501 E 1 
HETATM 30 C C2D HEM . . . Q 2 29.31 -31.624 -77.832 1 61.47 ? C2D HEM 501 E 1 
HETATM 31 C C3D HEM . . . Q 2 28.296 -30.947 -77.284 1 59.38 ? C3D HEM 501 E 1 
HETATM 32 C C4D HEM . . . Q 2 27.248 -31.963 -77.053 1 59.33 ? C4D HEM 501 E 1 
HETATM 33 C CMD HEM . . . Q 2 30.624 -31.002 -78.258 1 64.01 ? CMD HEM 501 E 1 
HETATM 34 C CAD HEM . . . Q 2 28.356 -29.472 -76.93 1 63.93 ? CAD HEM 501 E 1 
HETATM 35 C CBD HEM . . . Q 2 27.201 -28.558 -77.332 1 72.89 ? CBD HEM 501 E 1 
HETATM 36 C CGD HEM . . . Q 2 27.578 -27.132 -76.983 1 83.64 ? CGD HEM 501 E 1 
HETATM 37 O O1D HEM . . . Q 2 27.958 -26.791 -75.82 1 79.43 ? O1D HEM 501 E 1 
HETATM 38 O O2D HEM . . . Q 2 27.506 -26.285 -77.907 1 94.54 ? O2D HEM 501 E 1 
HETATM 39 N NA HEM . . . Q 2 25.115 -33.898 -76.467 1 57.87 ? NA HEM 501 E 1 
HETATM 40 N NB HEM . . . Q 2 25.499 -36.6 -77.325 1 57.13 ? NB HEM 501 E 1 
HETATM 41 N NC HEM . . . Q 2 28.134 -35.856 -78.36 1 58.27 ? NC HEM 501 E 1 
HETATM 42 N ND HEM . . . Q 2 27.623 -33.2 -77.481 1 62.68 ? ND HEM 501 E 1 
HETATM 43 FE FE HEM . . . Q 2 26.61 -34.838 -77.371 1 59.77 ? FE HEM 501 E 1 
#
_model_server_stats.io_time_ms              16 
_model_server_stats.parse_time_ms           24 
_model_server_stats.create_model_time_ms    26 
_model_server_stats.query_time_ms           303 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           43 
#