data_6UXR # _model_server_result.job_id Ec7eeeopDgvSgx0exZIEVA _model_server_result.datetime_utc '2024-11-04 22:16:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6uxr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":201}' # _entry.id 6UXR # _exptl.entry_id 6UXR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 496.638 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[(2~{R})-2-oxidanyl-3-[oxidanyl-[2-(trimethyl-$l^{4}-azanyl)ethoxy]phosphoryl]oxy-propyl] hexadecanoate' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6UXR _cell.length_a 55.921 _cell.length_b 89.949 _cell.length_c 77.572 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6UXR _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 2 2 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C24 H51 N O7 P' _chem_comp.formula_weight 496.638 _chem_comp.id K6G _chem_comp.mon_nstd_flag . _chem_comp.name '[(2~{R})-2-oxidanyl-3-[oxidanyl-[2-(trimethyl-$l^{4}-azanyl)ethoxy]phosphoryl]oxy-propyl] hexadecanoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C8 C7 K6G sing 160 n n C8 C9 K6G sing 161 n n C6 C7 K6G sing 162 n n C6 C5 K6G sing 163 n n C10 C9 K6G sing 164 n n C10 C11 K6G sing 165 n n C12 C11 K6G sing 166 n n C12 C13 K6G sing 167 n n C14 C13 K6G sing 168 n n C14 C15 K6G sing 169 n n C5 C4 K6G sing 170 n n C15 O K6G doub 171 n n C15 O1 K6G sing 172 n n O1 C16 K6G sing 173 n n C4 C3 K6G sing 174 n n C17 C16 K6G sing 175 n n C17 O6 K6G sing 176 n n C3 C2 K6G sing 177 n n C10 H1 K6G sing 178 n n C10 H2 K6G sing 179 n n C11 H3 K6G sing 180 n n C11 H4 K6G sing 181 n n C12 H5 K6G sing 182 n n C12 H6 K6G sing 183 n n C13 H7 K6G sing 184 n n C13 H8 K6G sing 185 n n C14 H9 K6G sing 186 n n C14 H10 K6G sing 187 n n C16 H11 K6G sing 188 n n C16 H12 K6G sing 189 n n C17 H13 K6G sing 190 n n C2 H15 K6G sing 191 n n C2 H16 K6G sing 192 n n C3 H18 K6G sing 193 n n C3 H19 K6G sing 194 n n C4 H20 K6G sing 195 n n C4 H21 K6G sing 196 n n C5 H22 K6G sing 197 n n C5 H23 K6G sing 198 n n C6 H24 K6G sing 199 n n C6 H25 K6G sing 200 n n C7 H26 K6G sing 201 n n C7 H27 K6G sing 202 n n C8 H28 K6G sing 203 n n C8 H29 K6G sing 204 n n C9 H30 K6G sing 205 n n C9 H31 K6G sing 206 n n O6 H32 K6G sing 207 n n C2 C1 K6G sing 208 n n C1 C18 K6G sing 209 n n C17 C19 K6G sing 210 n n C19 O2 K6G sing 211 n n O2 P1 K6G sing 212 n n C1 H14 K6G sing 213 n n C1 H17 K6G sing 214 n n C18 H33 K6G sing 215 n n C18 H34 K6G sing 216 n n C18 H35 K6G sing 217 n n C19 H36 K6G sing 218 n n C19 H37 K6G sing 219 n n P1 O4 K6G sing 220 n n P1 O5 K6G doub 221 n n P1 O3 K6G sing 222 n n O3 C21 K6G sing 223 n n C21 C22 K6G sing 224 n n C22 N1 K6G sing 225 n n N1 C24 K6G sing 226 n n N1 C25 K6G sing 227 n n N1 C26 K6G sing 228 n n O4 H38 K6G sing 229 n n C21 H41 K6G sing 230 n n C21 H42 K6G sing 231 n n C22 H43 K6G sing 232 n n C22 H44 K6G sing 233 n n C24 H45 K6G sing 234 n n C24 H46 K6G sing 235 n n C24 H47 K6G sing 236 n n C25 H48 K6G sing 237 n n C25 H49 K6G sing 238 n n C25 H50 K6G sing 239 n n C26 H51 K6G sing 240 n n C26 H52 K6G sing 241 n n C26 H53 K6G sing 242 n n # _atom_sites.entry_id 6UXR _atom_sites.fract_transf_matrix[1][1] 0.017882 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011117 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012891 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 K6G B 1 201 200 K6G LYP . D 2 K6G B 1 202 200 K6G LYP . E 3 PG4 B 1 203 1 PG4 PG4 . F 4 PGE B 1 204 2 PGE PGE . G 4 PGE B 1 205 3 PGE PGE . H 4 PGE B 1 206 4 PGE PGE . I 4 PGE B 1 207 5 PGE PGE . J 5 HOH A 1 201 5 HOH HOH . J 5 HOH A 2 202 2 HOH HOH . J 5 HOH A 3 203 18 HOH HOH . J 5 HOH A 4 204 38 HOH HOH . J 5 HOH A 5 205 27 HOH HOH . J 5 HOH A 6 206 42 HOH HOH . J 5 HOH A 7 207 20 HOH HOH . J 5 HOH A 8 208 3 HOH HOH . J 5 HOH A 9 209 28 HOH HOH . J 5 HOH A 10 210 1 HOH HOH . J 5 HOH A 11 211 44 HOH HOH . J 5 HOH A 12 212 19 HOH HOH . J 5 HOH A 13 213 36 HOH HOH . J 5 HOH A 14 214 31 HOH HOH . K 5 HOH B 1 301 12 HOH HOH . K 5 HOH B 2 302 21 HOH HOH . K 5 HOH B 3 303 15 HOH HOH . K 5 HOH B 4 304 24 HOH HOH . K 5 HOH B 5 305 33 HOH HOH . K 5 HOH B 6 306 16 HOH HOH . K 5 HOH B 7 307 6 HOH HOH . K 5 HOH B 8 308 9 HOH HOH . K 5 HOH B 9 309 13 HOH HOH . K 5 HOH B 10 310 10 HOH HOH . K 5 HOH B 11 311 30 HOH HOH . K 5 HOH B 12 312 14 HOH HOH . K 5 HOH B 13 313 43 HOH HOH . K 5 HOH B 14 314 8 HOH HOH . K 5 HOH B 15 315 25 HOH HOH . K 5 HOH B 16 316 17 HOH HOH . K 5 HOH B 17 317 23 HOH HOH . K 5 HOH B 18 318 7 HOH HOH . K 5 HOH B 19 319 29 HOH HOH . K 5 HOH B 20 320 41 HOH HOH . K 5 HOH B 21 321 11 HOH HOH . K 5 HOH B 22 322 26 HOH HOH . K 5 HOH B 23 323 4 HOH HOH . K 5 HOH B 24 324 35 HOH HOH . K 5 HOH B 25 325 40 HOH HOH . K 5 HOH B 26 326 32 HOH HOH . K 5 HOH B 27 327 39 HOH HOH . K 5 HOH B 28 328 37 HOH HOH . K 5 HOH B 29 329 34 HOH HOH . K 5 HOH B 30 330 45 HOH HOH . K 5 HOH B 31 331 22 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O K6G . . . C 2 12.445 -13.397 9.221 1 72.43 ? O K6G 201 B 1 HETATM 2 C C10 K6G . . . C 2 6.194 -14.334 11.085 1 67.28 ? C10 K6G 201 B 1 HETATM 3 C C11 K6G . . . C 2 7.679 -14.006 10.982 1 63.59 ? C11 K6G 201 B 1 HETATM 4 C C12 K6G . . . C 2 7.959 -12.536 10.693 1 63.92 ? C12 K6G 201 B 1 HETATM 5 C C13 K6G . . . C 2 9.171 -12.254 9.813 1 72.03 ? C13 K6G 201 B 1 HETATM 6 C C14 K6G . . . C 2 10.499 -12.672 10.428 1 76.38 ? C14 K6G 201 B 1 HETATM 7 C C15 K6G . . . C 2 11.654 -12.53 9.477 1 80.88 ? C15 K6G 201 B 1 HETATM 8 C C2 K6G . . . C 2 0.446 -20.383 15.561 1 65.78 ? C2 K6G 201 B 1 HETATM 9 C C3 K6G . . . C 2 -0.257 -19.257 14.827 1 60.46 ? C3 K6G 201 B 1 HETATM 10 C C4 K6G . . . C 2 0.478 -18.739 13.602 1 52.5 ? C4 K6G 201 B 1 HETATM 11 C C5 K6G . . . C 2 1.834 -18.107 13.885 1 41.14 ? C5 K6G 201 B 1 HETATM 12 C C6 K6G . . . C 2 2.448 -17.399 12.687 1 37.44 ? C6 K6G 201 B 1 HETATM 13 C C7 K6G . . . C 2 3.872 -16.897 12.911 1 45.53 ? C7 K6G 201 B 1 HETATM 14 C C8 K6G . . . C 2 4.346 -15.9 11.867 1 46.94 ? C8 K6G 201 B 1 HETATM 15 C C9 K6G . . . C 2 5.838 -15.594 11.866 1 57.14 ? C9 K6G 201 B 1 HETATM 16 O O1 K6G . . . C 2 11.696 -11.308 8.941 1 88.89 ? O1 K6G 201 B 1 HETATM 17 C C1 K6G . . . C 2 -0.295 -20.863 16.799 1 66.63 ? C1 K6G 201 B 1 HETATM 18 C C18 K6G . . . C 2 0.438 -21.959 17.543 1 72.16 ? C18 K6G 201 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 18 #