data_6UXZ # _model_server_result.job_id o4FR2AateuEvvqu194y-Ww _model_server_result.datetime_utc '2024-11-22 07:19:15' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6uxz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":504}' # _entry.id 6UXZ # _exptl.entry_id 6UXZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 438.368 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(4S)-4-[(E)-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)amino]-5-phenoxypentanoic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6UXZ _cell.length_a 152.65 _cell.length_b 152.65 _cell.length_c 69.16 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6UXZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 J N N # _chem_comp.formula 'C19 H23 N2 O8 P' _chem_comp.formula_weight 438.368 _chem_comp.id QL4 _chem_comp.mon_nstd_flag . _chem_comp.name '(4S)-4-[(E)-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)amino]-5-phenoxypentanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O19 C18 QL4 doub 275 n n O21 C18 QL4 sing 276 n n C18 C17 QL4 sing 277 n n C16 C17 QL4 sing 278 n n C16 C1 QL4 sing 279 n n C6 C5 QL4 doub 280 n y C6 C7 QL4 sing 281 n y C5 C4 QL4 sing 282 n y C2 C1 QL4 sing 283 n n C2 O1 QL4 sing 284 n n C1 N1 QL4 sing 285 n n C7 C8 QL4 doub 286 n y C4 O1 QL4 sing 287 n n C4 C9 QL4 doub 288 n y O3 C3 QL4 sing 289 n n N1 C4A QL4 doub 290 n n C8 C9 QL4 sing 291 n y C2A C21 QL4 sing 292 n n C3 C21 QL4 doub 293 n y C3 C41 QL4 sing 294 n y C4A C41 QL4 sing 295 n n C21 N11 QL4 sing 296 n y C41 C51 QL4 doub 297 n y N11 C61 QL4 doub 298 n y C51 C61 QL4 sing 299 n y C51 C5A QL4 sing 300 n n O4P C5A QL4 sing 301 n n O4P P QL4 sing 302 n n O2P P QL4 doub 303 n n P O3P QL4 sing 304 n n P O1P QL4 sing 305 n n C2 H1 QL4 sing 306 n n C2 H2 QL4 sing 307 n n C5 H3 QL4 sing 308 n n C6 H4 QL4 sing 309 n n C1 H5 QL4 sing 310 n n C7 H6 QL4 sing 311 n n C8 H7 QL4 sing 312 n n C9 H8 QL4 sing 313 n n C16 H9 QL4 sing 314 n n C16 H10 QL4 sing 315 n n C17 H11 QL4 sing 316 n n C17 H12 QL4 sing 317 n n O21 H13 QL4 sing 318 n n O3P H14 QL4 sing 319 n n O1P H15 QL4 sing 320 n n C5A H16 QL4 sing 321 n n C5A H17 QL4 sing 322 n n C61 H18 QL4 sing 323 n n C4A H19 QL4 sing 324 n n O3 H20 QL4 sing 325 n n C2A H21 QL4 sing 326 n n C2A H22 QL4 sing 327 n n C2A H23 QL4 sing 328 n n # _atom_sites.entry_id 6UXZ _atom_sites.fract_transf_matrix[1][1] 0.006551 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006551 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014459 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 B 1 501 2 SO4 SO4 . D 2 SO4 B 1 502 3 SO4 SO4 . E 2 SO4 B 1 503 6 SO4 SO4 . F 3 QL4 B 1 504 2 QL4 PIP . G 2 SO4 C 1 501 1 SO4 SO4 . H 2 SO4 C 1 502 4 SO4 SO4 . I 2 SO4 C 1 503 5 SO4 SO4 . J 3 QL4 C 1 504 1 QL4 PIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 QL4 . . . F 3 1.007 33.593 -5.204 1 76.67 ? N1 QL4 504 B 1 HETATM 2 C C2 QL4 . . . F 3 2.705 32.527 -3.85 1 91.91 ? C2 QL4 504 B 1 HETATM 3 C C3 QL4 . . . F 3 -1.652 33.171 -6.348 1 65.16 ? C3 QL4 504 B 1 HETATM 4 C C4 QL4 . . . F 3 4.211 30.855 -4.895 1 104.35 ? C4 QL4 504 B 1 HETATM 5 C C5 QL4 . . . F 3 4.708 30.39 -6.106 1 103.42 ? C5 QL4 504 B 1 HETATM 6 C C6 QL4 . . . F 3 5.551 29.285 -6.117 1 107.26 ? C6 QL4 504 B 1 HETATM 7 C C1 QL4 . . . F 3 2.223 33.836 -4.435 1 88.54 ? C1 QL4 504 B 1 HETATM 8 O O1 QL4 . . . F 3 3.39 31.94 -4.948 1 101.12 ? O1 QL4 504 B 1 HETATM 9 C C7 QL4 . . . F 3 5.899 28.647 -4.925 1 109.04 ? C7 QL4 504 B 1 HETATM 10 C C8 QL4 . . . F 3 5.403 29.116 -3.713 1 104.9 ? C8 QL4 504 B 1 HETATM 11 C C9 QL4 . . . F 3 4.557 30.219 -3.7 1 104.16 ? C9 QL4 504 B 1 HETATM 12 C C16 QL4 . . . F 3 1.923 34.897 -3.359 1 90.81 ? C16 QL4 504 B 1 HETATM 13 C C17 QL4 . . . F 3 0.838 34.542 -2.343 1 86.53 ? C17 QL4 504 B 1 HETATM 14 C C18 QL4 . . . F 3 0.627 35.708 -1.393 1 87.77 ? C18 QL4 504 B 1 HETATM 15 O O19 QL4 . . . F 3 0.37 36.845 -1.853 1 85.56 ? O19 QL4 504 B 1 HETATM 16 O O21 QL4 . . . F 3 0.707 35.507 -0.16 1 84.22 ? O21 QL4 504 B 1 HETATM 17 O O3P QL4 . . . F 3 3.854 34.836 -10.497 1 52.09 ? O3P QL4 504 B 1 HETATM 18 P P QL4 . . . F 3 2.965 33.611 -10.442 1 62.71 ? P QL4 504 B 1 HETATM 19 O O1P QL4 . . . F 3 2.432 33.261 -11.812 1 53.2 ? O1P QL4 504 B 1 HETATM 20 O O2P QL4 . . . F 3 3.65 32.43 -9.807 1 53.85 ? O2P QL4 504 B 1 HETATM 21 O O4P QL4 . . . F 3 1.702 33.891 -9.491 1 69.61 ? O4P QL4 504 B 1 HETATM 22 C C5A QL4 . . . F 3 0.795 32.809 -9.413 1 68.19 ? C5A QL4 504 B 1 HETATM 23 C C51 QL4 . . . F 3 -0.432 32.985 -8.555 1 69.5 ? C51 QL4 504 B 1 HETATM 24 C C61 QL4 . . . F 3 -1.68 32.981 -9.186 1 65.71 ? C61 QL4 504 B 1 HETATM 25 N N11 QL4 . . . F 3 -2.821 33.081 -8.496 1 64.13 ? N11 QL4 504 B 1 HETATM 26 C C41 QL4 . . . F 3 -0.345 33.04 -7.07 1 68.15 ? C41 QL4 504 B 1 HETATM 27 C C4A QL4 . . . F 3 0.976 33.125 -6.385 1 68.34 ? C4A QL4 504 B 1 HETATM 28 O O3 QL4 . . . F 3 -1.749 33.262 -4.99 1 67.45 ? O3 QL4 504 B 1 HETATM 29 C C21 QL4 . . . F 3 -2.893 33.177 -7.153 1 62.9 ? C21 QL4 504 B 1 HETATM 30 C C2A QL4 . . . F 3 -4.245 33.277 -6.5 1 59.89 ? C2A QL4 504 B 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 30 #