data_6UXZ # _model_server_result.job_id KADw9Smkti_-AhQAF-SGaw _model_server_result.datetime_utc '2024-11-25 09:11:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6uxz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":504}' # _entry.id 6UXZ # _exptl.entry_id 6UXZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 438.368 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(4S)-4-[(E)-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)amino]-5-phenoxypentanoic acid' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6UXZ _cell.length_a 152.65 _cell.length_b 152.65 _cell.length_c 69.16 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6UXZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 F N N ? 3 J N N # _chem_comp.formula 'C19 H23 N2 O8 P' _chem_comp.formula_weight 438.368 _chem_comp.id QL4 _chem_comp.mon_nstd_flag . _chem_comp.name '(4S)-4-[(E)-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)amino]-5-phenoxypentanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O19 C18 QL4 doub 275 n n O21 C18 QL4 sing 276 n n C18 C17 QL4 sing 277 n n C16 C17 QL4 sing 278 n n C16 C1 QL4 sing 279 n n C6 C5 QL4 doub 280 n y C6 C7 QL4 sing 281 n y C5 C4 QL4 sing 282 n y C2 C1 QL4 sing 283 n n C2 O1 QL4 sing 284 n n C1 N1 QL4 sing 285 n n C7 C8 QL4 doub 286 n y C4 O1 QL4 sing 287 n n C4 C9 QL4 doub 288 n y O3 C3 QL4 sing 289 n n N1 C4A QL4 doub 290 n n C8 C9 QL4 sing 291 n y C2A C21 QL4 sing 292 n n C3 C21 QL4 doub 293 n y C3 C41 QL4 sing 294 n y C4A C41 QL4 sing 295 n n C21 N11 QL4 sing 296 n y C41 C51 QL4 doub 297 n y N11 C61 QL4 doub 298 n y C51 C61 QL4 sing 299 n y C51 C5A QL4 sing 300 n n O4P C5A QL4 sing 301 n n O4P P QL4 sing 302 n n O2P P QL4 doub 303 n n P O3P QL4 sing 304 n n P O1P QL4 sing 305 n n C2 H1 QL4 sing 306 n n C2 H2 QL4 sing 307 n n C5 H3 QL4 sing 308 n n C6 H4 QL4 sing 309 n n C1 H5 QL4 sing 310 n n C7 H6 QL4 sing 311 n n C8 H7 QL4 sing 312 n n C9 H8 QL4 sing 313 n n C16 H9 QL4 sing 314 n n C16 H10 QL4 sing 315 n n C17 H11 QL4 sing 316 n n C17 H12 QL4 sing 317 n n O21 H13 QL4 sing 318 n n O3P H14 QL4 sing 319 n n O1P H15 QL4 sing 320 n n C5A H16 QL4 sing 321 n n C5A H17 QL4 sing 322 n n C61 H18 QL4 sing 323 n n C4A H19 QL4 sing 324 n n O3 H20 QL4 sing 325 n n C2A H21 QL4 sing 326 n n C2A H22 QL4 sing 327 n n C2A H23 QL4 sing 328 n n # _atom_sites.entry_id 6UXZ _atom_sites.fract_transf_matrix[1][1] 0.006551 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006551 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014459 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 SO4 B 1 501 2 SO4 SO4 . D 2 SO4 B 1 502 3 SO4 SO4 . E 2 SO4 B 1 503 6 SO4 SO4 . F 3 QL4 B 1 504 2 QL4 PIP . G 2 SO4 C 1 501 1 SO4 SO4 . H 2 SO4 C 1 502 4 SO4 SO4 . I 2 SO4 C 1 503 5 SO4 SO4 . J 3 QL4 C 1 504 1 QL4 PIP . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 QL4 . . . J 3 14.842 47.095 -29.073 1 67.28 ? N1 QL4 504 C 1 HETATM 2 C C2 QL4 . . . J 3 15.786 45.163 -30.184 1 78.84 ? C2 QL4 504 C 1 HETATM 3 C C3 QL4 . . . J 3 15.477 49.624 -27.912 1 49.69 ? C3 QL4 504 C 1 HETATM 4 C C4 QL4 . . . J 3 17.52 43.739 -29.329 1 86.06 ? C4 QL4 504 C 1 HETATM 5 C C5 QL4 . . . J 3 18.142 43.656 -30.594 1 78.73 ? C5 QL4 504 C 1 HETATM 6 C C6 QL4 . . . J 3 19.251 42.851 -30.789 1 78.65 ? C6 QL4 504 C 1 HETATM 7 C C1 QL4 . . . J 3 14.518 45.915 -29.872 1 73.47 ? C1 QL4 504 C 1 HETATM 8 O O1 QL4 . . . J 3 16.401 44.514 -29.083 1 87.51 ? O1 QL4 504 C 1 HETATM 9 C C7 QL4 . . . J 3 19.754 42.124 -29.72 1 82.31 ? C7 QL4 504 C 1 HETATM 10 C C8 QL4 . . . J 3 19.149 42.194 -28.462 1 80.47 ? C8 QL4 504 C 1 HETATM 11 C C9 QL4 . . . J 3 18.036 43.001 -28.266 1 84.31 ? C9 QL4 504 C 1 HETATM 12 C C16 QL4 . . . J 3 14.056 46.377 -31.252 1 72.67 ? C16 QL4 504 C 1 HETATM 13 C C17 QL4 . . . J 3 13.05 47.49 -31.161 1 73.51 ? C17 QL4 504 C 1 HETATM 14 C C18 QL4 . . . J 3 12.381 47.704 -32.479 1 70.93 ? C18 QL4 504 C 1 HETATM 15 O O19 QL4 . . . J 3 12.998 48.301 -33.388 1 65.91 ? O19 QL4 504 C 1 HETATM 16 O O21 QL4 . . . J 3 11.218 47.271 -32.614 1 70.81 ? O21 QL4 504 C 1 HETATM 17 O O3P QL4 . . . J 3 13.346 44.946 -23.509 1 42.31 ? O3P QL4 504 C 1 HETATM 18 P P QL4 . . . J 3 14.846 45.266 -23.62 1 45.94 ? P QL4 504 C 1 HETATM 19 O O1P QL4 . . . J 3 15.349 45.825 -22.314 1 44.88 ? O1P QL4 504 C 1 HETATM 20 O O2P QL4 . . . J 3 15.689 44.07 -23.904 1 54.82 ? O2P QL4 504 C 1 HETATM 21 O O4P QL4 . . . J 3 15.229 46.199 -24.884 1 46.75 ? O4P QL4 504 C 1 HETATM 22 C C5A QL4 . . . J 3 15.288 47.561 -24.561 1 51.6 ? C5A QL4 504 C 1 HETATM 23 C C51 QL4 . . . J 3 15.418 48.588 -25.646 1 52.39 ? C51 QL4 504 C 1 HETATM 24 C C61 QL4 . . . J 3 15.636 49.857 -25.1 1 47.26 ? C61 QL4 504 C 1 HETATM 25 N N11 QL4 . . . J 3 15.786 50.928 -25.853 1 47.41 ? N11 QL4 504 C 1 HETATM 26 C C41 QL4 . . . J 3 15.311 48.386 -27.125 1 53.44 ? C41 QL4 504 C 1 HETATM 27 C C4A QL4 . . . J 3 15.023 47.101 -27.817 1 59.62 ? C4A QL4 504 C 1 HETATM 28 O O3 QL4 . . . J 3 15.408 49.621 -29.261 1 51.6 ? O3 QL4 504 C 1 HETATM 29 C C21 QL4 . . . J 3 15.729 50.898 -27.197 1 52.7 ? C21 QL4 504 C 1 HETATM 30 C C2A QL4 . . . J 3 15.911 52.196 -27.955 1 54.23 ? C2A QL4 504 C 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 30 #