data_6UZ8
#
_model_server_result.job_id            EH97mPSIykl-eQI02BbPTQ 
_model_server_result.datetime_utc      '2024-12-27 02:42:16' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6uz8 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"Q","auth_seq_id":1001}' 
#
_entry.id    6UZ8 
#
_exptl.entry_id    6UZ8 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              382.84 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            "(5-chloro-1'H-spiro[indole-3,4'-piperidin]-1'-yl)[(2R)-2,3-dihydro-1,4-benzodioxin-2-yl]methanone" 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6UZ8 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6UZ8 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 G N N 
? 4 K N N 
? 4 M N N 
? 4 Q N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
disulf ? disulf1 A SG CYS 169 A CYS 253 1_555 A SG CYS 174 A CYS 258 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf2 B SG CYS 169 D CYS 253 1_555 B SG CYS 174 D CYS 258 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf3 C SG CYS 169 B CYS 253 1_555 C SG CYS 174 B CYS 258 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? 
disulf ? disulf4 D SG CYS 169 C CYS 253 1_555 D SG CYS 174 C CYS 258 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.037 ? 
#
_chem_comp.formula           'C21 H19 Cl N2 O3' 
_chem_comp.formula_weight    382.84 
_chem_comp.id                R0D 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              "(5-chloro-1'H-spiro[indole-3,4'-piperidin]-1'-yl)[(2R)-2,3-dihydro-1,4-benzodioxin-2-yl]methanone" 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N06 C07 R0D doub 275 n n 
N06 C05 R0D sing 276 n n 
C07 C08 R0D sing 277 n n 
C04 C05 R0D doub 278 n y 
C04 C03 R0D sing 279 n y 
C05 C26 R0D sing 280 n y 
C25 C24 R0D sing 281 n n 
C25 C08 R0D sing 282 n n 
C24 N11 R0D sing 283 n n 
C03 C02 R0D doub 284 n y 
C08 C26 R0D sing 285 n n 
C08 C09 R0D sing 286 n n 
C26 C27 R0D doub 287 n y 
C02 C27 R0D sing 288 n y 
C02 CL01 R0D sing 289 n n 
N11 C10 R0D sing 290 n n 
N11 C12 R0D sing 291 n n 
C09 C10 R0D sing 292 n n 
O23 C12 R0D doub 293 n n 
C12 C13 R0D sing 294 n n 
C13 C14 R0D sing 295 n n 
C13 O22 R0D sing 296 n n 
C14 O15 R0D sing 297 n n 
O22 C21 R0D sing 298 n n 
O15 C16 R0D sing 299 n n 
C21 C16 R0D doub 300 n y 
C21 C20 R0D sing 301 n y 
C16 C17 R0D sing 302 n y 
C20 C19 R0D doub 303 n y 
C17 C18 R0D doub 304 n y 
C19 C18 R0D sing 305 n y 
C10 H1 R0D sing 306 n n 
C10 H2 R0D sing 307 n n 
C13 H3 R0D sing 308 n n 
C17 H4 R0D sing 309 n n 
C20 H5 R0D sing 310 n n 
C24 H6 R0D sing 311 n n 
C24 H7 R0D sing 312 n n 
C03 H8 R0D sing 313 n n 
C04 H9 R0D sing 314 n n 
C07 H10 R0D sing 315 n n 
C09 H11 R0D sing 316 n n 
C09 H12 R0D sing 317 n n 
C14 H13 R0D sing 318 n n 
C14 H14 R0D sing 319 n n 
C18 H15 R0D sing 320 n n 
C19 H16 R0D sing 321 n n 
C25 H17 R0D sing 322 n n 
C25 H18 R0D sing 323 n n 
C27 H19 R0D sing 324 n n 
#
_atom_sites.entry_id                     6UZ8 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 SBM A 1 1001 2 SBM 6O8 . 
F 3 Y01 A 1 1002 3 Y01 Y01 . 
G 4 R0D A 1 1003 1 R0D LIG . 
H 3 Y01 A 1 1004 4 Y01 Y01 . 
I 2 SBM D 1 1001 2 SBM 6O8 . 
J 3 Y01 D 1 1002 3 Y01 Y01 . 
K 4 R0D D 1 1003 1 R0D LIG . 
L 3 Y01 D 1 1004 4 Y01 Y01 . 
M 4 R0D B 1 1001 1 R0D LIG . 
N 3 Y01 B 1 1002 4 Y01 Y01 . 
O 2 SBM B 1 1003 2 SBM 6O8 . 
P 3 Y01 B 1 1004 3 Y01 Y01 . 
Q 4 R0D C 1 1001 1 R0D LIG . 
R 3 Y01 C 1 1002 4 Y01 Y01 . 
S 2 SBM C 1 1003 2 SBM 6O8 . 
T 3 Y01 C 1 1004 3 Y01 Y01 . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 R0D . . . Q 4 156.778 183.931 130.938 1 41.83 ? C10 R0D 1001 C 1 
HETATM 2 C C13 R0D . . . Q 4 157.084 181.59 132.897 1 41.83 ? C13 R0D 1001 C 1 
HETATM 3 C C17 R0D . . . Q 4 155.999 181.068 136.829 1 41.83 ? C17 R0D 1001 C 1 
HETATM 4 C C20 R0D . . . Q 4 157.15 183.488 135.991 1 41.83 ? C20 R0D 1001 C 1 
HETATM 5 C C21 R0D . . . Q 4 157.114 182.403 135.11 1 41.83 ? C21 R0D 1001 C 1 
HETATM 6 C C24 R0D . . . Q 4 158.331 182.896 129.365 1 41.83 ? C24 R0D 1001 C 1 
HETATM 7 C C26 R0D . . . Q 4 159.277 186.673 129.663 1 41.83 ? C26 R0D 1001 C 1 
HETATM 8 C C02 R0D . . . Q 4 161.011 188.11 130.424 1 41.83 ? C02 R0D 1001 C 1 
HETATM 9 C C03 R0D . . . Q 4 160.8 189.022 129.414 1 41.83 ? C03 R0D 1001 C 1 
HETATM 10 C C04 R0D . . . Q 4 159.798 188.772 128.484 1 41.83 ? C04 R0D 1001 C 1 
HETATM 11 C C05 R0D . . . Q 4 159.05 187.602 128.618 1 41.83 ? C05 R0D 1001 C 1 
HETATM 12 C C07 R0D . . . Q 4 157.382 185.971 128.401 1 41.83 ? C07 R0D 1001 C 1 
HETATM 13 C C08 R0D . . . Q 4 158.323 185.499 129.554 1 41.83 ? C08 R0D 1001 C 1 
HETATM 14 C C09 R0D . . . Q 4 157.529 185.279 130.844 1 41.83 ? C09 R0D 1001 C 1 
HETATM 15 C C12 R0D . . . Q 4 157.823 181.675 131.539 1 41.83 ? C12 R0D 1001 C 1 
HETATM 16 C C14 R0D . . . Q 4 157.252 180.197 133.537 1 41.83 ? C14 R0D 1001 C 1 
HETATM 17 C C16 R0D . . . Q 4 156.536 181.213 135.556 1 41.83 ? C16 R0D 1001 C 1 
HETATM 18 C C18 R0D . . . Q 4 156.039 182.152 137.691 1 41.83 ? C18 R0D 1001 C 1 
HETATM 19 C C19 R0D . . . Q 4 156.613 183.352 137.27 1 41.83 ? C19 R0D 1001 C 1 
HETATM 20 C C25 R0D . . . Q 4 159.092 184.226 129.223 1 41.83 ? C25 R0D 1001 C 1 
HETATM 21 C C27 R0D . . . Q 4 160.274 186.936 130.573 1 41.83 ? C27 R0D 1001 C 1 
HETATM 22 N N06 R0D . . . Q 4 158.022 187.159 127.822 1 41.83 ? N06 R0D 1001 C 1 
HETATM 23 N N11 R0D . . . Q 4 157.655 182.761 130.661 1 41.83 ? N11 R0D 1001 C 1 
HETATM 24 O O15 R0D . . . Q 4 156.472 180.118 134.728 1 41.83 ? O15 R0D 1001 C 1 
HETATM 25 O O22 R0D . . . Q 4 157.642 182.526 133.835 1 41.83 ? O22 R0D 1001 C 1 
HETATM 26 O O23 R0D . . . Q 4 158.569 180.768 131.215 1 41.83 ? O23 R0D 1001 C 1 
HETATM 27 CL CL01 R0D . . . Q 4 162.26 188.451 131.561 1 41.83 ? CL01 R0D 1001 C 1 
#
_model_server_stats.io_time_ms              20 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    57 
_model_server_stats.query_time_ms           278 
_model_server_stats.encode_time_ms          10 
_model_server_stats.element_count           27 
#