data_6V17 # _model_server_result.job_id '_JmdHDBzcJk0PlzM3GX0cg' _model_server_result.datetime_utc '2024-11-04 22:47:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6v17 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":301}' # _entry.id 6V17 # _exptl.entry_id 6V17 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 497.554 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "N'-[1,1-bis(oxidanylidene)thian-4-yl]-5-ethyl-4-oxidanylidene-7-[3-(trifluoromethyl)phenyl]thieno[3,2-c]pyridine-2-carboximidamide" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6V17 _cell.length_a 41.102 _cell.length_b 64.749 _cell.length_c 96.107 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6V17 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,F 1 1 B,E,G 2 1 A,C,D,F 3 1 B,E,G 3 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x+1/2,-y,z+1/2 -1 0 0 0 -1 0 0 0 1 20.551 0 48.0535 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # _chem_comp.formula 'C22 H22 F3 N3 O3 S2' _chem_comp.formula_weight 497.554 _chem_comp.id H1B _chem_comp.mon_nstd_flag . _chem_comp.name "N'-[1,1-bis(oxidanylidene)thian-4-yl]-5-ethyl-4-oxidanylidene-7-[3-(trifluoromethyl)phenyl]thieno[3,2-c]pyridine-2-carboximidamide" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C01 C05 H1B sing 129 n n C05 N08 H1B sing 130 n n N08 C09 H1B sing 131 n n N08 C32 H1B sing 132 n n C09 C11 H1B doub 133 n n C11 C12 H1B sing 134 n n C11 C26 H1B sing 135 n n C12 C13 H1B sing 136 n y C12 C20 H1B doub 137 n y C13 C15 H1B doub 138 n y C15 C17 H1B sing 139 n y C17 C19 H1B doub 140 n y C19 C20 H1B sing 141 n y C19 C22 H1B sing 142 n n C22 F23 H1B sing 143 n n C22 F24 H1B sing 144 n n C22 F25 H1B sing 145 n n C26 S27 H1B sing 146 n y C26 C31 H1B doub 147 n y S27 C28 H1B sing 148 n y C28 C29 H1B doub 149 n y C28 C34 H1B sing 150 n n C29 C31 H1B sing 151 n y C31 C32 H1B sing 152 n n C32 O33 H1B doub 153 n n C34 N35 H1B sing 154 n n C34 N37 H1B doub 155 n n N37 C39 H1B sing 156 n n C39 C41 H1B sing 157 n n C39 C53 H1B sing 158 n n C41 C44 H1B sing 159 n n C44 S47 H1B sing 160 n n S47 O48 H1B doub 161 n n S47 O49 H1B doub 162 n n S47 C50 H1B sing 163 n n C50 C53 H1B sing 164 n n C01 H011 H1B sing 165 n n C01 H012 H1B sing 166 n n C01 H013 H1B sing 167 n n C05 H051 H1B sing 168 n n C05 H052 H1B sing 169 n n C09 H09 H1B sing 170 n n C13 H13 H1B sing 171 n n C20 H20 H1B sing 172 n n C15 H15 H1B sing 173 n n C17 H17 H1B sing 174 n n C29 H29 H1B sing 175 n n N35 H351 H1B sing 176 n n N35 H352 H1B sing 177 n n C39 H39 H1B sing 178 n n C41 H411 H1B sing 179 n n C41 H412 H1B sing 180 n n C53 H531 H1B sing 181 n n C53 H532 H1B sing 182 n n C44 H441 H1B sing 183 n n C44 H442 H1B sing 184 n n C50 H501 H1B sing 185 n n C50 H502 H1B sing 186 n n # _atom_sites.entry_id 6V17 _atom_sites.fract_transf_matrix[1][1] 0.02433 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015444 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010405 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CL A 1 301 1 CL CL . D 3 H1B A 1 302 1 H1B LIG . E 3 H1B B 1 301 3 H1B LIG . F 4 HOH A 1 401 5 HOH HOH . F 4 HOH A 2 402 25 HOH HOH . F 4 HOH A 3 403 2 HOH HOH . F 4 HOH A 4 404 32 HOH HOH . F 4 HOH A 5 405 28 HOH HOH . F 4 HOH A 6 406 20 HOH HOH . F 4 HOH A 7 407 15 HOH HOH . F 4 HOH A 8 408 4 HOH HOH . F 4 HOH A 9 409 26 HOH HOH . F 4 HOH A 10 410 18 HOH HOH . F 4 HOH A 11 411 6 HOH HOH . F 4 HOH A 12 412 17 HOH HOH . F 4 HOH A 13 413 1 HOH HOH . F 4 HOH A 14 414 14 HOH HOH . F 4 HOH A 15 415 29 HOH HOH . F 4 HOH A 16 416 8 HOH HOH . F 4 HOH A 17 417 10 HOH HOH . F 4 HOH A 18 418 30 HOH HOH . F 4 HOH A 19 419 31 HOH HOH . F 4 HOH A 20 420 21 HOH HOH . G 4 HOH B 1 401 3 HOH HOH . G 4 HOH B 2 402 24 HOH HOH . G 4 HOH B 3 403 19 HOH HOH . G 4 HOH B 4 404 27 HOH HOH . G 4 HOH B 5 405 22 HOH HOH . G 4 HOH B 6 406 16 HOH HOH . G 4 HOH B 7 407 23 HOH HOH . G 4 HOH B 8 408 7 HOH HOH . G 4 HOH B 9 409 9 HOH HOH . G 4 HOH B 10 410 13 HOH HOH . G 4 HOH B 11 411 12 HOH HOH . G 4 HOH B 12 412 33 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 H1B . . . E 3 11.636 -8.029 -23.378 1 22.45 ? C01 H1B 301 B 1 HETATM 2 C C05 H1B . . . E 3 11.677 -6.806 -24.283 1 29.47 ? C05 H1B 301 B 1 HETATM 3 N N08 H1B . . . E 3 11.878 -7.322 -25.619 1 39.8 ? N08 H1B 301 B 1 HETATM 4 C C09 H1B . . . E 3 13.238 -7.482 -26.112 1 40.92 ? C09 H1B 301 B 1 HETATM 5 C C11 H1B . . . E 3 13.493 -8.021 -27.5 1 42.49 ? C11 H1B 301 B 1 HETATM 6 C C12 H1B . . . E 3 14.937 -8.182 -27.953 1 45.71 ? C12 H1B 301 B 1 HETATM 7 C C13 H1B . . . E 3 15.887 -7.204 -27.693 1 43.91 ? C13 H1B 301 B 1 HETATM 8 C C15 H1B . . . E 3 17.199 -7.407 -28.105 1 41.43 ? C15 H1B 301 B 1 HETATM 9 C C17 H1B . . . E 3 17.554 -8.584 -28.757 1 43.36 ? C17 H1B 301 B 1 HETATM 10 C C19 H1B . . . E 3 16.599 -9.558 -29.01 1 51.14 ? C19 H1B 301 B 1 HETATM 11 C C20 H1B . . . E 3 15.295 -9.35 -28.598 1 47.18 ? C20 H1B 301 B 1 HETATM 12 C C22 H1B . . . E 3 16.934 -10.873 -29.725 1 58.69 ? C22 H1B 301 B 1 HETATM 13 F F23 H1B . . . E 3 15.931 -11.265 -30.562 1 59.9 ? F23 H1B 301 B 1 HETATM 14 F F24 H1B . . . E 3 17.133 -11.84 -28.787 1 62.36 ? F24 H1B 301 B 1 HETATM 15 F F25 H1B . . . E 3 18.052 -10.736 -30.477 1 62.32 ? F25 H1B 301 B 1 HETATM 16 C C26 H1B . . . E 3 12.322 -8.427 -28.37 1 42.08 ? C26 H1B 301 B 1 HETATM 17 S S27 H1B . . . E 3 12.265 -9.052 -29.872 1 39.73 ? S27 H1B 301 B 1 HETATM 18 C C28 H1B . . . E 3 10.653 -9.148 -30.073 1 41.7 ? C28 H1B 301 B 1 HETATM 19 C C29 H1B . . . E 3 9.974 -8.712 -28.895 1 38.79 ? C29 H1B 301 B 1 HETATM 20 C C31 H1B . . . E 3 11.002 -8.261 -27.865 1 41.52 ? C31 H1B 301 B 1 HETATM 21 C C32 H1B . . . E 3 10.736 -7.699 -26.454 1 42.1 ? C32 H1B 301 B 1 HETATM 22 O O33 H1B . . . E 3 9.614 -7.573 -26.065 1 46.14 ? O33 H1B 301 B 1 HETATM 23 C C34 H1B . . . E 3 9.886 -9.698 -31.252 1 42.25 ? C34 H1B 301 B 1 HETATM 24 N N35 H1B . . . E 3 10.282 -9.567 -32.429 1 43.8 ? N35 H1B 301 B 1 HETATM 25 N N37 H1B . . . E 3 8.677 -10.416 -30.874 1 43.28 ? N37 H1B 301 B 1 HETATM 26 C C39 H1B . . . E 3 7.774 -11.085 -31.788 1 36.49 ? C39 H1B 301 B 1 HETATM 27 C C41 H1B . . . E 3 6.197 -10.564 -31.432 1 33.3 ? C41 H1B 301 B 1 HETATM 28 C C44 H1B . . . E 3 5.132 -11.425 -32.117 1 32.1 ? C44 H1B 301 B 1 HETATM 29 S S47 H1B . . . E 3 5.392 -12.989 -31.778 1 36.45 ? S47 H1B 301 B 1 HETATM 30 O O48 H1B . . . E 3 5.031 -13.185 -30.379 1 35.37 ? O48 H1B 301 B 1 HETATM 31 O O49 H1B . . . E 3 4.501 -13.691 -32.69 1 38.95 ? O49 H1B 301 B 1 HETATM 32 C C50 H1B . . . E 3 6.849 -13.684 -31.876 1 35.04 ? C50 H1B 301 B 1 HETATM 33 C C53 H1B . . . E 3 7.972 -12.742 -31.428 1 32.68 ? C53 H1B 301 B 1 # _model_server_stats.io_time_ms 11 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 33 #