data_6V17 # _model_server_result.job_id L4nqYqcg3lr8N2OCuIyGlA _model_server_result.datetime_utc '2024-11-04 22:48:43' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6v17 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":302}' # _entry.id 6V17 # _exptl.entry_id 6V17 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 497.554 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "N'-[1,1-bis(oxidanylidene)thian-4-yl]-5-ethyl-4-oxidanylidene-7-[3-(trifluoromethyl)phenyl]thieno[3,2-c]pyridine-2-carboximidamide" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6V17 _cell.length_a 41.102 _cell.length_b 64.749 _cell.length_c 96.107 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6V17 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 PISA dimeric 2 software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,F 1 1 B,E,G 2 1 A,C,D,F 3 1 B,E,G 3 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_555 -x+1/2,-y,z+1/2 -1 0 0 0 -1 0 0 0 1 20.551 0 48.0535 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 D N N ? 3 E N N # _chem_comp.formula 'C22 H22 F3 N3 O3 S2' _chem_comp.formula_weight 497.554 _chem_comp.id H1B _chem_comp.mon_nstd_flag . _chem_comp.name "N'-[1,1-bis(oxidanylidene)thian-4-yl]-5-ethyl-4-oxidanylidene-7-[3-(trifluoromethyl)phenyl]thieno[3,2-c]pyridine-2-carboximidamide" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C01 C05 H1B sing 129 n n C05 N08 H1B sing 130 n n N08 C09 H1B sing 131 n n N08 C32 H1B sing 132 n n C09 C11 H1B doub 133 n n C11 C12 H1B sing 134 n n C11 C26 H1B sing 135 n n C12 C13 H1B sing 136 n y C12 C20 H1B doub 137 n y C13 C15 H1B doub 138 n y C15 C17 H1B sing 139 n y C17 C19 H1B doub 140 n y C19 C20 H1B sing 141 n y C19 C22 H1B sing 142 n n C22 F23 H1B sing 143 n n C22 F24 H1B sing 144 n n C22 F25 H1B sing 145 n n C26 S27 H1B sing 146 n y C26 C31 H1B doub 147 n y S27 C28 H1B sing 148 n y C28 C29 H1B doub 149 n y C28 C34 H1B sing 150 n n C29 C31 H1B sing 151 n y C31 C32 H1B sing 152 n n C32 O33 H1B doub 153 n n C34 N35 H1B sing 154 n n C34 N37 H1B doub 155 n n N37 C39 H1B sing 156 n n C39 C41 H1B sing 157 n n C39 C53 H1B sing 158 n n C41 C44 H1B sing 159 n n C44 S47 H1B sing 160 n n S47 O48 H1B doub 161 n n S47 O49 H1B doub 162 n n S47 C50 H1B sing 163 n n C50 C53 H1B sing 164 n n C01 H011 H1B sing 165 n n C01 H012 H1B sing 166 n n C01 H013 H1B sing 167 n n C05 H051 H1B sing 168 n n C05 H052 H1B sing 169 n n C09 H09 H1B sing 170 n n C13 H13 H1B sing 171 n n C20 H20 H1B sing 172 n n C15 H15 H1B sing 173 n n C17 H17 H1B sing 174 n n C29 H29 H1B sing 175 n n N35 H351 H1B sing 176 n n N35 H352 H1B sing 177 n n C39 H39 H1B sing 178 n n C41 H411 H1B sing 179 n n C41 H412 H1B sing 180 n n C53 H531 H1B sing 181 n n C53 H532 H1B sing 182 n n C44 H441 H1B sing 183 n n C44 H442 H1B sing 184 n n C50 H501 H1B sing 185 n n C50 H502 H1B sing 186 n n # _atom_sites.entry_id 6V17 _atom_sites.fract_transf_matrix[1][1] 0.02433 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015444 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.010405 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CL A 1 301 1 CL CL . D 3 H1B A 1 302 1 H1B LIG . E 3 H1B B 1 301 3 H1B LIG . F 4 HOH A 1 401 5 HOH HOH . F 4 HOH A 2 402 25 HOH HOH . F 4 HOH A 3 403 2 HOH HOH . F 4 HOH A 4 404 32 HOH HOH . F 4 HOH A 5 405 28 HOH HOH . F 4 HOH A 6 406 20 HOH HOH . F 4 HOH A 7 407 15 HOH HOH . F 4 HOH A 8 408 4 HOH HOH . F 4 HOH A 9 409 26 HOH HOH . F 4 HOH A 10 410 18 HOH HOH . F 4 HOH A 11 411 6 HOH HOH . F 4 HOH A 12 412 17 HOH HOH . F 4 HOH A 13 413 1 HOH HOH . F 4 HOH A 14 414 14 HOH HOH . F 4 HOH A 15 415 29 HOH HOH . F 4 HOH A 16 416 8 HOH HOH . F 4 HOH A 17 417 10 HOH HOH . F 4 HOH A 18 418 30 HOH HOH . F 4 HOH A 19 419 31 HOH HOH . F 4 HOH A 20 420 21 HOH HOH . G 4 HOH B 1 401 3 HOH HOH . G 4 HOH B 2 402 24 HOH HOH . G 4 HOH B 3 403 19 HOH HOH . G 4 HOH B 4 404 27 HOH HOH . G 4 HOH B 5 405 22 HOH HOH . G 4 HOH B 6 406 16 HOH HOH . G 4 HOH B 7 407 23 HOH HOH . G 4 HOH B 8 408 7 HOH HOH . G 4 HOH B 9 409 9 HOH HOH . G 4 HOH B 10 410 13 HOH HOH . G 4 HOH B 11 411 12 HOH HOH . G 4 HOH B 12 412 33 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C01 H1B . . . D 3 32.266 6.878 18.071 1 26.15 ? C01 H1B 302 A 1 HETATM 2 C C05 H1B . . . D 3 32.236 5.607 18.928 1 31.38 ? C05 H1B 302 A 1 HETATM 3 N N08 H1B . . . D 3 32.497 6.129 20.246 1 32.92 ? N08 H1B 302 A 1 HETATM 4 C C09 H1B . . . D 3 33.865 6.195 20.708 1 33.53 ? C09 H1B 302 A 1 HETATM 5 C C11 H1B . . . D 3 34.175 6.76 22.065 1 35.49 ? C11 H1B 302 A 1 HETATM 6 C C12 H1B . . . D 3 35.642 6.806 22.487 1 39.72 ? C12 H1B 302 A 1 HETATM 7 C C13 H1B . . . D 3 36.55 5.801 22.189 1 41.02 ? C13 H1B 302 A 1 HETATM 8 C C15 H1B . . . D 3 37.883 5.91 22.586 1 41.46 ? C15 H1B 302 A 1 HETATM 9 C C17 H1B . . . D 3 38.302 7.045 23.256 1 45.94 ? C17 H1B 302 A 1 HETATM 10 C C19 H1B . . . D 3 37.392 8.056 23.528 1 54.17 ? C19 H1B 302 A 1 HETATM 11 C C20 H1B . . . D 3 36.073 7.935 23.138 1 46.59 ? C20 H1B 302 A 1 HETATM 12 C C22 H1B . . . D 3 37.798 9.332 24.262 1 66.84 ? C22 H1B 302 A 1 HETATM 13 F F23 H1B . . . D 3 37.713 9.117 25.603 1 66.93 ? F23 H1B 302 A 1 HETATM 14 F F24 H1B . . . D 3 36.971 10.373 23.938 1 72.85 ? F24 H1B 302 A 1 HETATM 15 F F25 H1B . . . D 3 39.059 9.668 23.89 1 72.78 ? F25 H1B 302 A 1 HETATM 16 C C26 H1B . . . D 3 33.042 7.3 22.929 1 37.39 ? C26 H1B 302 A 1 HETATM 17 S S27 H1B . . . D 3 33.016 7.986 24.413 1 35.91 ? S27 H1B 302 A 1 HETATM 18 C C28 H1B . . . D 3 31.434 8.274 24.611 1 37.11 ? C28 H1B 302 A 1 HETATM 19 C C29 H1B . . . D 3 30.729 7.833 23.45 1 36.74 ? C29 H1B 302 A 1 HETATM 20 C C31 H1B . . . D 3 31.712 7.247 22.439 1 37.11 ? C31 H1B 302 A 1 HETATM 21 C C32 H1B . . . D 3 31.391 6.656 21.06 1 34.32 ? C32 H1B 302 A 1 HETATM 22 O O33 H1B . . . D 3 30.255 6.639 20.699 1 30.33 ? O33 H1B 302 A 1 HETATM 23 C C34 H1B . . . D 3 30.724 8.932 25.778 1 41.14 ? C34 H1B 302 A 1 HETATM 24 N N35 H1B . . . D 3 31.18 8.95 26.939 1 43.37 ? N35 H1B 302 A 1 HETATM 25 N N37 H1B . . . D 3 29.498 9.606 25.432 1 42.24 ? N37 H1B 302 A 1 HETATM 26 C C39 H1B . . . D 3 28.671 10.312 26.376 1 39.55 ? C39 H1B 302 A 1 HETATM 27 C C41 H1B . . . D 3 28.815 11.947 25.944 1 41.44 ? C41 H1B 302 A 1 HETATM 28 C C44 H1B . . . D 3 27.754 12.851 26.561 1 41.69 ? C44 H1B 302 A 1 HETATM 29 S S47 H1B . . . D 3 26.302 12.256 26.206 1 44.21 ? S47 H1B 302 A 1 HETATM 30 O O48 H1B . . . D 3 25.315 12.928 27.065 1 40.06 ? O48 H1B 302 A 1 HETATM 31 O O49 H1B . . . D 3 26.172 12.58 24.768 1 39.86 ? O49 H1B 302 A 1 HETATM 32 C C50 H1B . . . D 3 25.915 10.689 26.428 1 40.4 ? C50 H1B 302 A 1 HETATM 33 C C53 H1B . . . D 3 27.083 9.719 26.178 1 39.83 ? C53 H1B 302 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 23 _model_server_stats.create_model_time_ms 2 _model_server_stats.query_time_ms 272 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 33 #