data_6V33 # _model_server_result.job_id sOQWReaZRmMy4MMiffzjQA _model_server_result.datetime_utc '2025-08-31 21:40:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6v33 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":303}' # _entry.id 6V33 # _exptl.entry_id 6V33 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 62.068 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1,2-ETHANEDIOL _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6V33 _cell.length_a 90.364 _cell.length_b 90.364 _cell.length_c 124.647 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6V33 _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 32 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 H N N # _chem_comp.formula 'C2 H6 O2' _chem_comp.formula_weight 62.068 _chem_comp.id EDO _chem_comp.mon_nstd_flag . _chem_comp.name 1,2-ETHANEDIOL _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 'ETHYLENE GLYCOL' # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 EDO sing 147 n n C1 C2 EDO sing 148 n n C1 H11 EDO sing 149 n n C1 H12 EDO sing 150 n n O1 HO1 EDO sing 151 n n C2 O2 EDO sing 152 n n C2 H21 EDO sing 153 n n C2 H22 EDO sing 154 n n O2 HO2 EDO sing 155 n n # _atom_sites.entry_id 6V33 _atom_sites.fract_transf_matrix[1][1] 0.011066 _atom_sites.fract_transf_matrix[1][2] 0.006389 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012778 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.008023 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 0FX A 1 301 300 0FX 0FX . D 3 FOL A 1 302 301 FOL 1YJ . E 4 EDO A 1 303 2 EDO EDO . F 2 0FX B 1 301 300 0FX 0FX . G 3 FOL B 1 302 301 FOL 1YJ . H 4 EDO B 1 303 1 EDO EDO . I 5 HOH A 1 401 367 HOH HOH . I 5 HOH A 2 402 299 HOH HOH . I 5 HOH A 3 403 260 HOH HOH . I 5 HOH A 4 404 236 HOH HOH . I 5 HOH A 5 405 298 HOH HOH . I 5 HOH A 6 406 55 HOH HOH . I 5 HOH A 7 407 239 HOH HOH . I 5 HOH A 8 408 101 HOH HOH . I 5 HOH A 9 409 243 HOH HOH . I 5 HOH A 10 410 24 HOH HOH . I 5 HOH A 11 411 254 HOH HOH . I 5 HOH A 12 412 266 HOH HOH . I 5 HOH A 13 413 283 HOH HOH . I 5 HOH A 14 414 96 HOH HOH . I 5 HOH A 15 415 113 HOH HOH . I 5 HOH A 16 416 48 HOH HOH . I 5 HOH A 17 417 77 HOH HOH . I 5 HOH A 18 418 133 HOH HOH . I 5 HOH A 19 419 18 HOH HOH . I 5 HOH A 20 420 362 HOH HOH . I 5 HOH A 21 421 265 HOH HOH . I 5 HOH A 22 422 282 HOH HOH . I 5 HOH A 23 423 332 HOH HOH . I 5 HOH A 24 424 19 HOH HOH . I 5 HOH A 25 425 51 HOH HOH . I 5 HOH A 26 426 95 HOH HOH . I 5 HOH A 27 427 53 HOH HOH . I 5 HOH A 28 428 57 HOH HOH . I 5 HOH A 29 429 6 HOH HOH . I 5 HOH A 30 430 270 HOH HOH . I 5 HOH A 31 431 83 HOH HOH . I 5 HOH A 32 432 52 HOH HOH . I 5 HOH A 33 433 29 HOH HOH . I 5 HOH A 34 434 288 HOH HOH . I 5 HOH A 35 435 99 HOH HOH . I 5 HOH A 36 436 281 HOH HOH . I 5 HOH A 37 437 149 HOH HOH . I 5 HOH A 38 438 4 HOH HOH . I 5 HOH A 39 439 263 HOH HOH . I 5 HOH A 40 440 277 HOH HOH . I 5 HOH A 41 441 69 HOH HOH . I 5 HOH A 42 442 301 HOH HOH . I 5 HOH A 43 443 75 HOH HOH . I 5 HOH A 44 444 240 HOH HOH . I 5 HOH A 45 445 88 HOH HOH . I 5 HOH A 46 446 8 HOH HOH . I 5 HOH A 47 447 352 HOH HOH . I 5 HOH A 48 448 264 HOH HOH . I 5 HOH A 49 449 125 HOH HOH . I 5 HOH A 50 450 337 HOH HOH . I 5 HOH A 51 451 378 HOH HOH . I 5 HOH A 52 452 111 HOH HOH . I 5 HOH A 53 453 34 HOH HOH . I 5 HOH A 54 454 289 HOH HOH . I 5 HOH A 55 455 358 HOH HOH . I 5 HOH A 56 456 226 HOH HOH . I 5 HOH A 57 457 256 HOH HOH . I 5 HOH A 58 458 98 HOH HOH . I 5 HOH A 59 459 304 HOH HOH . I 5 HOH A 60 460 87 HOH HOH . I 5 HOH A 61 461 302 HOH HOH . I 5 HOH A 62 462 144 HOH HOH . I 5 HOH A 63 463 37 HOH HOH . I 5 HOH A 64 464 290 HOH HOH . I 5 HOH A 65 465 380 HOH HOH . I 5 HOH A 66 466 259 HOH HOH . I 5 HOH A 67 467 284 HOH HOH . I 5 HOH A 68 468 273 HOH HOH . I 5 HOH A 69 469 275 HOH HOH . I 5 HOH A 70 470 365 HOH HOH . I 5 HOH A 71 471 349 HOH HOH . I 5 HOH A 72 472 106 HOH HOH . I 5 HOH A 73 473 32 HOH HOH . I 5 HOH A 74 474 258 HOH HOH . I 5 HOH A 75 475 137 HOH HOH . I 5 HOH A 76 476 369 HOH HOH . I 5 HOH A 77 477 251 HOH HOH . I 5 HOH A 78 478 26 HOH HOH . I 5 HOH A 79 479 371 HOH HOH . I 5 HOH A 80 480 268 HOH HOH . I 5 HOH A 81 481 31 HOH HOH . I 5 HOH A 82 482 292 HOH HOH . I 5 HOH A 83 483 103 HOH HOH . I 5 HOH A 84 484 360 HOH HOH . I 5 HOH A 85 485 293 HOH HOH . I 5 HOH A 86 486 272 HOH HOH . I 5 HOH A 87 487 262 HOH HOH . I 5 HOH A 88 488 374 HOH HOH . I 5 HOH A 89 489 303 HOH HOH . I 5 HOH A 90 490 250 HOH HOH . I 5 HOH A 91 491 35 HOH HOH . I 5 HOH A 92 492 261 HOH HOH . I 5 HOH A 93 493 17 HOH HOH . I 5 HOH A 94 494 50 HOH HOH . I 5 HOH A 95 495 107 HOH HOH . I 5 HOH A 96 496 1 HOH HOH . I 5 HOH A 97 497 373 HOH HOH . I 5 HOH A 98 498 147 HOH HOH . I 5 HOH A 99 499 214 HOH HOH . I 5 HOH A 100 500 364 HOH HOH . I 5 HOH A 101 501 59 HOH HOH . I 5 HOH A 102 502 248 HOH HOH . I 5 HOH A 103 503 15 HOH HOH . I 5 HOH A 104 504 269 HOH HOH . I 5 HOH A 105 505 379 HOH HOH . I 5 HOH A 106 506 249 HOH HOH . I 5 HOH A 107 507 140 HOH HOH . I 5 HOH A 108 508 361 HOH HOH . I 5 HOH A 109 509 28 HOH HOH . I 5 HOH A 110 510 235 HOH HOH . I 5 HOH A 111 511 42 HOH HOH . I 5 HOH A 112 512 14 HOH HOH . I 5 HOH A 113 513 295 HOH HOH . I 5 HOH A 114 514 300 HOH HOH . I 5 HOH A 115 515 338 HOH HOH . I 5 HOH A 116 516 297 HOH HOH . I 5 HOH A 117 517 355 HOH HOH . I 5 HOH A 118 518 294 HOH HOH . I 5 HOH A 119 519 279 HOH HOH . I 5 HOH A 120 520 339 HOH HOH . I 5 HOH A 121 521 274 HOH HOH . I 5 HOH A 122 522 366 HOH HOH . I 5 HOH A 123 523 56 HOH HOH . I 5 HOH A 124 524 368 HOH HOH . I 5 HOH A 125 525 363 HOH HOH . I 5 HOH A 126 526 286 HOH HOH . I 5 HOH A 127 527 247 HOH HOH . I 5 HOH A 128 528 237 HOH HOH . I 5 HOH A 129 529 278 HOH HOH . I 5 HOH A 130 530 255 HOH HOH . I 5 HOH A 131 531 357 HOH HOH . I 5 HOH A 132 532 356 HOH HOH . I 5 HOH A 133 533 171 HOH HOH . I 5 HOH A 134 534 257 HOH HOH . I 5 HOH A 135 535 375 HOH HOH . I 5 HOH A 136 536 218 HOH HOH . I 5 HOH A 137 537 359 HOH HOH . I 5 HOH A 138 538 372 HOH HOH . I 5 HOH A 139 539 392 HOH HOH . I 5 HOH A 140 540 267 HOH HOH . I 5 HOH A 141 541 74 HOH HOH . I 5 HOH A 142 542 353 HOH HOH . I 5 HOH A 143 543 296 HOH HOH . I 5 HOH A 144 544 215 HOH HOH . I 5 HOH A 145 545 285 HOH HOH . J 5 HOH B 1 401 23 HOH HOH . J 5 HOH B 2 402 241 HOH HOH . J 5 HOH B 3 403 317 HOH HOH . J 5 HOH B 4 404 25 HOH HOH . J 5 HOH B 5 405 351 HOH HOH . J 5 HOH B 6 406 141 HOH HOH . J 5 HOH B 7 407 94 HOH HOH . J 5 HOH B 8 408 36 HOH HOH . J 5 HOH B 9 409 348 HOH HOH . J 5 HOH B 10 410 315 HOH HOH . J 5 HOH B 11 411 76 HOH HOH . J 5 HOH B 12 412 306 HOH HOH . J 5 HOH B 13 413 331 HOH HOH . J 5 HOH B 14 414 68 HOH HOH . J 5 HOH B 15 415 253 HOH HOH . J 5 HOH B 16 416 46 HOH HOH . J 5 HOH B 17 417 307 HOH HOH . J 5 HOH B 18 418 330 HOH HOH . J 5 HOH B 19 419 40 HOH HOH . J 5 HOH B 20 420 66 HOH HOH . J 5 HOH B 21 421 10 HOH HOH . J 5 HOH B 22 422 38 HOH HOH . J 5 HOH B 23 423 245 HOH HOH . J 5 HOH B 24 424 341 HOH HOH . J 5 HOH B 25 425 80 HOH HOH . J 5 HOH B 26 426 311 HOH HOH . J 5 HOH B 27 427 334 HOH HOH . J 5 HOH B 28 428 27 HOH HOH . J 5 HOH B 29 429 126 HOH HOH . J 5 HOH B 30 430 238 HOH HOH . J 5 HOH B 31 431 71 HOH HOH . J 5 HOH B 32 432 216 HOH HOH . J 5 HOH B 33 433 327 HOH HOH . J 5 HOH B 34 434 58 HOH HOH . J 5 HOH B 35 435 54 HOH HOH . J 5 HOH B 36 436 41 HOH HOH . J 5 HOH B 37 437 229 HOH HOH . J 5 HOH B 38 438 108 HOH HOH . J 5 HOH B 39 439 20 HOH HOH . J 5 HOH B 40 440 97 HOH HOH . J 5 HOH B 41 441 308 HOH HOH . J 5 HOH B 42 442 104 HOH HOH . J 5 HOH B 43 443 350 HOH HOH . J 5 HOH B 44 444 227 HOH HOH . J 5 HOH B 45 445 11 HOH HOH . J 5 HOH B 46 446 333 HOH HOH . J 5 HOH B 47 447 329 HOH HOH . J 5 HOH B 48 448 91 HOH HOH . J 5 HOH B 49 449 21 HOH HOH . J 5 HOH B 50 450 343 HOH HOH . J 5 HOH B 51 451 393 HOH HOH . J 5 HOH B 52 452 244 HOH HOH . J 5 HOH B 53 453 391 HOH HOH . J 5 HOH B 54 454 346 HOH HOH . J 5 HOH B 55 455 233 HOH HOH . J 5 HOH B 56 456 328 HOH HOH . J 5 HOH B 57 457 122 HOH HOH . J 5 HOH B 58 458 90 HOH HOH . J 5 HOH B 59 459 316 HOH HOH . J 5 HOH B 60 460 376 HOH HOH . J 5 HOH B 61 461 93 HOH HOH . J 5 HOH B 62 462 388 HOH HOH . J 5 HOH B 63 463 2 HOH HOH . J 5 HOH B 64 464 129 HOH HOH . J 5 HOH B 65 465 128 HOH HOH . J 5 HOH B 66 466 39 HOH HOH . J 5 HOH B 67 467 313 HOH HOH . J 5 HOH B 68 468 102 HOH HOH . J 5 HOH B 69 469 377 HOH HOH . J 5 HOH B 70 470 323 HOH HOH . J 5 HOH B 71 471 64 HOH HOH . J 5 HOH B 72 472 22 HOH HOH . J 5 HOH B 73 473 305 HOH HOH . J 5 HOH B 74 474 385 HOH HOH . J 5 HOH B 75 475 16 HOH HOH . J 5 HOH B 76 476 320 HOH HOH . J 5 HOH B 77 477 344 HOH HOH . J 5 HOH B 78 478 345 HOH HOH . J 5 HOH B 79 479 44 HOH HOH . J 5 HOH B 80 480 242 HOH HOH . J 5 HOH B 81 481 60 HOH HOH . J 5 HOH B 82 482 43 HOH HOH . J 5 HOH B 83 483 127 HOH HOH . J 5 HOH B 84 484 390 HOH HOH . J 5 HOH B 85 485 336 HOH HOH . J 5 HOH B 86 486 217 HOH HOH . J 5 HOH B 87 487 389 HOH HOH . J 5 HOH B 88 488 230 HOH HOH . J 5 HOH B 89 489 340 HOH HOH . J 5 HOH B 90 490 213 HOH HOH . J 5 HOH B 91 491 225 HOH HOH . J 5 HOH B 92 492 124 HOH HOH . J 5 HOH B 93 493 73 HOH HOH . J 5 HOH B 94 494 309 HOH HOH . J 5 HOH B 95 495 246 HOH HOH . J 5 HOH B 96 496 386 HOH HOH . J 5 HOH B 97 497 387 HOH HOH . J 5 HOH B 98 498 312 HOH HOH . J 5 HOH B 99 499 383 HOH HOH . J 5 HOH B 100 500 310 HOH HOH . J 5 HOH B 101 501 228 HOH HOH . J 5 HOH B 102 502 384 HOH HOH . J 5 HOH B 103 503 319 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 EDO . . . E 4 27.02 -30.6 25.427 1 37.53 ? C1 EDO 303 A 1 HETATM 2 O O1 EDO . . . E 4 27.017 -29.586 26.381 1 36.31 ? O1 EDO 303 A 1 HETATM 3 C C2 EDO . . . E 4 28.067 -31.591 25.735 1 35.2 ? C2 EDO 303 A 1 HETATM 4 O O2 EDO . . . E 4 27.766 -32.83 25.172 1 39.93 ? O2 EDO 303 A 1 # _model_server_stats.io_time_ms 30 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 266 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 4 #