data_6V3U # _model_server_result.job_id tGG2jQ4bKXNN8e5cS-2EFw _model_server_result.datetime_utc '2024-11-15 09:41:46' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6v3u # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":302}' # _entry.id 6V3U # _exptl.entry_id 6V3U _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 60.095 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ISOPROPYL ALCOHOL' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6V3U _cell.length_a 80.043 _cell.length_b 80.043 _cell.length_c 72.502 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6V3U _symmetry.cell_setting ? _symmetry.Int_Tables_number 76 _symmetry.space_group_name_Hall 'P 4w' _symmetry.space_group_name_H-M 'P 41' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 E N N ? 4 I N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C TRP 32 A TRP 51 1_555 A N MSE 33 A MSE 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? covale ? covale2 A C MSE 33 A MSE 52 1_555 A N HIS 34 A HIS 53 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale3 A C LEU 40 A LEU 59 1_555 A N MSE 41 A MSE 60 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale4 A C MSE 41 A MSE 60 1_555 A N GLY 42 A GLY 61 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale5 A C SER 79 A SER 98 1_555 A N MSE 80 A MSE 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale6 A C MSE 80 A MSE 99 1_555 A N VAL 81 A VAL 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale7 A C LYS 98 A LYS 117 1_555 A N MSE 99 A MSE 118 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale8 A C MSE 99 A MSE 118 1_555 A N GLY 100 A GLY 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.338 ? covale ? covale9 A C GLY 101 A GLY 120 1_555 A N MSE 102 A MSE 121 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale10 A C MSE 102 A MSE 121 1_555 A N ALA 103 A ALA 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale11 A C GLY 180 A GLY 199 1_555 A N OCS 181 A OCS 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale12 A C OCS 181 A OCS 200 1_555 A N MSE 182 A MSE 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale13 A C MSE 182 A MSE 201 1_555 A N ILE 183 A ILE 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.34 ? covale ? covale14 A C ALA 220 A ALA 239 1_555 A N MSE 221 A MSE 240 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.325 ? covale ? covale15 A C ALA 220 A ALA 239 1_555 A N MSE 221 A MSE 240 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.328 ? covale ? covale16 A C MSE 221 A MSE 240 1_555 A N SER 222 A SER 241 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.335 ? covale ? covale17 A C MSE 221 A MSE 240 1_555 A N SER 222 A SER 241 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale18 B C TRP 32 B TRP 51 1_555 B N MSE 33 B MSE 52 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale19 B C MSE 33 B MSE 52 1_555 B N HIS 34 B HIS 53 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale20 B C LEU 40 B LEU 59 1_555 B N MSE 41 B MSE 60 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale21 B C MSE 41 B MSE 60 1_555 B N GLY 42 B GLY 61 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? covale ? covale22 B C SER 79 B SER 98 1_555 B N MSE 80 B MSE 99 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale23 B C MSE 80 B MSE 99 1_555 B N VAL 81 B VAL 100 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? covale ? covale24 B C LYS 98 B LYS 117 1_555 B N MSE 99 B MSE 118 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? covale ? covale25 B C MSE 99 B MSE 118 1_555 B N GLY 100 B GLY 119 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale26 B C GLY 101 B GLY 120 1_555 B N MSE 102 B MSE 121 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale27 B C MSE 102 B MSE 121 1_555 B N ALA 103 B ALA 122 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.337 ? covale ? covale28 B C GLY 180 B GLY 199 1_555 B N OCS 181 B OCS 200 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale29 B C OCS 181 B OCS 200 1_555 B N MSE 182 B MSE 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.324 ? covale ? covale30 B C MSE 182 B MSE 201 1_555 B N ILE 183 B ILE 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale31 B C ALA 220 B ALA 239 1_555 B N MSE 221 B MSE 240 1_555 ? ? ? ? A ? ? ? ? ? ? ? 1.327 ? covale ? covale32 B C ALA 220 B ALA 239 1_555 B N MSE 221 B MSE 240 1_555 ? ? ? ? B ? ? ? ? ? ? ? 1.333 ? covale ? covale33 B C MSE 221 B MSE 240 1_555 B N SER 222 B SER 241 1_555 ? A ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale34 B C MSE 221 B MSE 240 1_555 B N SER 222 B SER 241 1_555 ? B ? ? ? ? ? ? ? ? ? ? 1.336 ? metalc ? metalc1 A ND1 HIS 93 A HIS 112 1_555 C ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.993 ? metalc ? metalc2 A NE2 HIS 95 A HIS 114 1_555 C ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.976 ? metalc ? metalc3 A OD1 ASP 196 A ASP 215 1_555 G ZN ZN . B ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.044 ? metalc ? metalc4 A NE2 HIS 223 A HIS 242 1_555 C ZN ZN . A ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.81 ? metalc ? metalc5 C ZN ZN . A ZN 300 1_555 B OD1 ASP 196 B ASP 215 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.987 ? metalc ? metalc6 B ND1 HIS 93 B HIS 112 1_555 G ZN ZN . B ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.989 ? metalc ? metalc7 B NE2 HIS 95 B HIS 114 1_555 G ZN ZN . B ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.022 ? metalc ? metalc8 B NE2 HIS 223 B HIS 242 1_555 G ZN ZN . B ZN 300 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.781 ? # _chem_comp.formula 'C3 H8 O' _chem_comp.formula_weight 60.095 _chem_comp.id IPA _chem_comp.mon_nstd_flag . _chem_comp.name 'ISOPROPYL ALCOHOL' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms 2-PROPANOL # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 C2 IPA sing 169 n n C1 H11 IPA sing 170 n n C1 H12 IPA sing 171 n n C1 H13 IPA sing 172 n n C2 C3 IPA sing 173 n n C2 O2 IPA sing 174 n n C2 H2 IPA sing 175 n n C3 H31 IPA sing 176 n n C3 H32 IPA sing 177 n n C3 H33 IPA sing 178 n n O2 HO2 IPA sing 179 n n # _atom_sites.entry_id 6V3U _atom_sites.fract_transf_matrix[1][1] 0.012493 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012493 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013793 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN A 1 300 300 ZN ZN . D 3 SO4 A 1 301 301 SO4 SO4 . E 4 IPA A 1 302 302 IPA IPA . F 5 EDO A 1 303 303 EDO EDO . G 2 ZN B 1 300 300 ZN ZN . H 3 SO4 B 1 301 301 SO4 SO4 . I 4 IPA B 1 302 302 IPA IPA . J 5 EDO B 1 303 303 EDO EDO . K 5 EDO B 1 304 304 EDO EDO . L 5 EDO B 1 305 305 EDO EDO . M 6 HOH A 1 401 1 HOH HOH . M 6 HOH A 2 402 26 HOH HOH . M 6 HOH A 3 403 4 HOH HOH . M 6 HOH A 4 404 8 HOH HOH . M 6 HOH A 5 405 7 HOH HOH . M 6 HOH A 6 406 9 HOH HOH . M 6 HOH A 7 407 11 HOH HOH . M 6 HOH A 8 408 14 HOH HOH . M 6 HOH A 9 409 19 HOH HOH . M 6 HOH A 10 410 3 HOH HOH . M 6 HOH A 11 411 13 HOH HOH . M 6 HOH A 12 412 15 HOH HOH . M 6 HOH A 13 413 18 HOH HOH . M 6 HOH A 14 414 23 HOH HOH . M 6 HOH A 15 415 16 HOH HOH . M 6 HOH A 16 416 24 HOH HOH . M 6 HOH A 17 417 2 HOH HOH . M 6 HOH A 18 418 21 HOH HOH . M 6 HOH A 19 419 17 HOH HOH . M 6 HOH A 20 420 6 HOH HOH . M 6 HOH A 21 421 22 HOH HOH . M 6 HOH A 22 422 5 HOH HOH . M 6 HOH A 23 423 25 HOH HOH . M 6 HOH A 24 424 10 HOH HOH . M 6 HOH A 25 425 12 HOH HOH . N 6 HOH B 1 401 38 HOH HOH . N 6 HOH B 2 402 54 HOH HOH . N 6 HOH B 3 403 44 HOH HOH . N 6 HOH B 4 404 45 HOH HOH . N 6 HOH B 5 405 46 HOH HOH . N 6 HOH B 6 406 37 HOH HOH . N 6 HOH B 7 407 51 HOH HOH . N 6 HOH B 8 408 41 HOH HOH . N 6 HOH B 9 409 31 HOH HOH . N 6 HOH B 10 410 48 HOH HOH . N 6 HOH B 11 411 29 HOH HOH . N 6 HOH B 12 412 27 HOH HOH . N 6 HOH B 13 413 34 HOH HOH . N 6 HOH B 14 414 30 HOH HOH . N 6 HOH B 15 415 43 HOH HOH . N 6 HOH B 16 416 35 HOH HOH . N 6 HOH B 17 417 40 HOH HOH . N 6 HOH B 18 418 56 HOH HOH . N 6 HOH B 19 419 28 HOH HOH . N 6 HOH B 20 420 49 HOH HOH . N 6 HOH B 21 421 42 HOH HOH . N 6 HOH B 22 422 55 HOH HOH . N 6 HOH B 23 423 47 HOH HOH . N 6 HOH B 24 424 33 HOH HOH . N 6 HOH B 25 425 32 HOH HOH . N 6 HOH B 26 426 39 HOH HOH . N 6 HOH B 27 427 57 HOH HOH . N 6 HOH B 28 428 20 HOH HOH . N 6 HOH B 29 429 50 HOH HOH . N 6 HOH B 30 430 52 HOH HOH . N 6 HOH B 31 431 53 HOH HOH . N 6 HOH B 32 432 36 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 IPA . . . I 4 34.775 38.609 33.348 1 88.84 ? C1 IPA 302 B 1 HETATM 2 C C2 IPA . . . I 4 35.234 37.458 32.451 1 90.72 ? C2 IPA 302 B 1 HETATM 3 C C3 IPA . . . I 4 36.325 37.948 31.498 1 90.31 ? C3 IPA 302 B 1 HETATM 4 O O2 IPA . . . I 4 35.726 36.396 33.249 1 94.33 ? O2 IPA 302 B 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 15 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 279 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 4 #