data_6V53
#
_model_server_result.job_id            DQq5kxl-nAcjySfxkTQDFQ 
_model_server_result.datetime_utc      '2024-11-24 20:54:57' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6v53 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":203}' 
#
_entry.id    6V53 
#
_exptl.entry_id    6V53 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              54.938 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'MANGANESE (II) ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6V53 
_cell.length_a            89.731 
_cell.length_b            89.731 
_cell.length_c            132.135 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6V53 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        97 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'I 4 2 2' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    monomeric 
_pdbx_struct_assembly.oligomeric_count      1 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 D N N 
? 4 E N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 A NE2 HIS 61 A HIS 41 1_555 D MN MN . A MN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.172 ? 
metalc ? metalc2 A OE1 GLU 81 A GLU 61 1_555 E MN MN . A MN 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.435 ? 
metalc ? metalc3 A OD2 ASP 109 A ASP 89 1_555 D MN MN . A MN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.132 ? 
metalc ? metalc4 A OD1 ASP 109 A ASP 89 1_555 E MN MN . A MN 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.208 ? 
metalc ? metalc5 A OE2 GLU 120 A GLU 100 1_555 D MN MN . A MN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.221 ? 
metalc ? metalc6 A O ILE 121 A ILE 101 1_555 D MN MN . A MN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? 
metalc ? metalc7 B O1 QPY . A QPY 201 1_555 D MN MN . A MN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.976 ? 
metalc ? metalc8 B O2 QPY . A QPY 201 1_555 D MN MN . A MN 203 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.524 ? 
metalc ? metalc9 B O2 QPY . A QPY 201 1_555 E MN MN . A MN 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? 
metalc ? metalc10 B O3 QPY . A QPY 201 1_555 E MN MN . A MN 204 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.33 ? 
metalc ? metalc11 E MN MN . A MN 204 1_555 H O HOH . A HOH 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.68 ? 
metalc ? metalc12 E MN MN . A MN 204 1_555 H O HOH . A HOH 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.327 ? 
#
_chem_comp.formula           'Mn 2' 
_chem_comp.formula_weight    54.938 
_chem_comp.id                MN 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'MANGANESE (II) ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6V53 
_atom_sites.fract_transf_matrix[1][1]    0.011144 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.011144 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.007568 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 QPY A 1 201 181 QPY 494 . 
C 3 QQ4 A 1 202 201 QQ4 PVP . 
D 4 MN A 1 203 1 MN MN . 
E 4 MN A 1 204 2 MN MN . 
F 5 SO4 A 1 205 1 SO4 SO4 . 
G 5 SO4 A 1 206 2 SO4 SO4 . 
H 6 HOH A 1 301 9 HOH HOH . 
H 6 HOH A 2 302 2 HOH HOH . 
H 6 HOH A 3 303 14 HOH HOH . 
H 6 HOH A 4 304 39 HOH HOH . 
H 6 HOH A 5 305 15 HOH HOH . 
H 6 HOH A 6 306 11 HOH HOH . 
H 6 HOH A 7 307 7 HOH HOH . 
H 6 HOH A 8 308 3 HOH HOH . 
H 6 HOH A 9 309 57 HOH HOH . 
H 6 HOH A 10 310 25 HOH HOH . 
H 6 HOH A 11 311 16 HOH HOH . 
H 6 HOH A 12 312 8 HOH HOH . 
H 6 HOH A 13 313 35 HOH HOH . 
H 6 HOH A 14 314 4 HOH HOH . 
H 6 HOH A 15 315 5 HOH HOH . 
H 6 HOH A 16 316 13 HOH HOH . 
H 6 HOH A 17 317 42 HOH HOH . 
H 6 HOH A 18 318 47 HOH HOH . 
H 6 HOH A 19 319 51 HOH HOH . 
H 6 HOH A 20 320 1 HOH HOH . 
H 6 HOH A 21 321 10 HOH HOH . 
H 6 HOH A 22 322 22 HOH HOH . 
H 6 HOH A 23 323 6 HOH HOH . 
H 6 HOH A 24 324 38 HOH HOH . 
H 6 HOH A 25 325 48 HOH HOH . 
H 6 HOH A 26 326 55 HOH HOH . 
H 6 HOH A 27 327 58 HOH HOH . 
H 6 HOH A 28 328 34 HOH HOH . 
H 6 HOH A 29 329 27 HOH HOH . 
H 6 HOH A 30 330 17 HOH HOH . 
H 6 HOH A 31 331 18 HOH HOH . 
H 6 HOH A 32 332 24 HOH HOH . 
H 6 HOH A 33 333 12 HOH HOH . 
H 6 HOH A 34 334 36 HOH HOH . 
H 6 HOH A 35 335 31 HOH HOH . 
H 6 HOH A 36 336 32 HOH HOH . 
H 6 HOH A 37 337 29 HOH HOH . 
H 6 HOH A 38 338 43 HOH HOH . 
H 6 HOH A 39 339 23 HOH HOH . 
H 6 HOH A 40 340 19 HOH HOH . 
H 6 HOH A 41 341 56 HOH HOH . 
H 6 HOH A 42 342 49 HOH HOH . 
H 6 HOH A 43 343 30 HOH HOH . 
H 6 HOH A 44 344 37 HOH HOH . 
H 6 HOH A 45 345 26 HOH HOH . 
H 6 HOH A 46 346 40 HOH HOH . 
H 6 HOH A 47 347 28 HOH HOH . 
H 6 HOH A 48 348 45 HOH HOH . 
H 6 HOH A 49 349 46 HOH HOH . 
H 6 HOH A 50 350 44 HOH HOH . 
H 6 HOH A 51 351 41 HOH HOH . 
H 6 HOH A 52 352 21 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           MN 
_atom_site.label_atom_id         MN 
_atom_site.label_comp_id         MN 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       4 
_atom_site.Cartn_x               -4.306 
_atom_site.Cartn_y               -27.318 
_atom_site.Cartn_z               19.386 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        54.93 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          MN 
_atom_site.auth_comp_id          MN 
_atom_site.auth_seq_id           203 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              68 
_model_server_stats.parse_time_ms           18 
_model_server_stats.create_model_time_ms    7 
_model_server_stats.query_time_ms           295 
_model_server_stats.encode_time_ms          1 
_model_server_stats.element_count           1 
#