data_6V6F # _model_server_result.job_id Bde0RKCvqW5cp_QMd68DqA _model_server_result.datetime_utc '2025-08-01 21:59:03' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6v6f # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":502}' # _entry.id 6V6F # _exptl.entry_id 6V6F _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 7 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 100.67 _cell.angle_gamma 90 _cell.entry_id 6V6F _cell.length_a 72.011 _cell.length_b 70.24 _cell.length_c 79.7 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6V6F _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression B,C,F,G,H,I,J,L,M 1 1 A,D,E,K 1 2 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 2_645 -x+1,y-1/2,-z -1 0 0 0 1 0 0 0 -1 72.011 -35.12 0 # _struct_asym.details ? _struct_asym.entity_id 7 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A ND1 HIS 37 A HIS 49 1_555 D ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.121 ? metalc ? metalc2 A SG CYS 43 A CYS 55 1_555 D ZN ZN . A ZN 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.388 ? metalc ? metalc3 D ZN ZN . A ZN 201 2_645 B NE2 HIS 230 B HIS 1431 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.375 ? metalc ? metalc4 D ZN ZN . A ZN 201 2_645 B OD1 ASP 251 B ASP 1452 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.062 ? metalc ? metalc5 C OG SER 18 C SER 17 1_555 I MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.086 ? metalc ? metalc6 C OG1 THR 36 C THR 35 1_555 I MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? metalc ? metalc7 H O3G GNP . C GNP 501 1_555 I MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? metalc ? metalc8 H O2B GNP . C GNP 501 1_555 I MG MG . C MG 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.238 ? metalc ? metalc9 I MG MG . C MG 502 1_555 M O HOH . C HOH 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.921 ? metalc ? metalc10 I MG MG . C MG 502 1_555 M O HOH . C HOH 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.882 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6V6F _atom_sites.fract_transf_matrix[1][1] 0.013887 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002617 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.014237 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.012768 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 ZN A 1 201 1 ZN ZN . E 5 FMT A 1 202 4 FMT FMT . F 5 FMT B 1 1601 3 FMT FMT . G 5 FMT B 1 1602 5 FMT FMT . H 6 GNP C 1 501 501 GNP GNP . I 7 MG C 1 502 1 MG MG . J 5 FMT C 1 503 2 FMT FMT . K 8 HOH A 1 301 8 HOH HOH . K 8 HOH A 2 302 17 HOH HOH . L 8 HOH B 1 1701 4 HOH HOH . L 8 HOH B 2 1702 11 HOH HOH . L 8 HOH B 3 1703 24 HOH HOH . L 8 HOH B 4 1704 7 HOH HOH . L 8 HOH B 5 1705 22 HOH HOH . L 8 HOH B 6 1706 23 HOH HOH . L 8 HOH B 7 1707 21 HOH HOH . L 8 HOH B 8 1708 25 HOH HOH . M 8 HOH C 1 601 6 HOH HOH . M 8 HOH C 2 602 5 HOH HOH . M 8 HOH C 3 603 26 HOH HOH . M 8 HOH C 4 604 1 HOH HOH . M 8 HOH C 5 605 9 HOH HOH . M 8 HOH C 6 606 2 HOH HOH . M 8 HOH C 7 607 10 HOH HOH . M 8 HOH C 8 608 16 HOH HOH . M 8 HOH C 9 609 3 HOH HOH . M 8 HOH C 10 610 13 HOH HOH . M 8 HOH C 11 611 15 HOH HOH . M 8 HOH C 12 612 20 HOH HOH . M 8 HOH C 13 613 14 HOH HOH . M 8 HOH C 14 614 19 HOH HOH . M 8 HOH C 15 615 18 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id I _atom_site.label_entity_id 7 _atom_site.Cartn_x 3.05 _atom_site.Cartn_y 7.423 _atom_site.Cartn_z 28.36 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 64.56 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 502 _atom_site.auth_asym_id C _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 75 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 13 _model_server_stats.query_time_ms 342 _model_server_stats.encode_time_ms 16 _model_server_stats.element_count 1 #