data_6V74 # _model_server_result.job_id R5AYo5fjegGCbg6A-mlMmQ _model_server_result.datetime_utc '2024-10-19 09:45:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6v74 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":607}' # _entry.id 6V74 # _exptl.entry_id 6V74 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 6 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.54 _cell.angle_gamma 90 _cell.entry_id 6V74 _cell.length_a 80.99 _cell.length_b 154.58 _cell.length_c 92.15 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6V74 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,G,H,I,J,K,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,PA,RA 1 1 D,JA,KA,LA,MA,NA,OA,SA 1 2 B,L,M,N,O,P,Q,R,S,T,QA 1 3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 1_454 x-1,y,z-1 1 0 0 0 1 0 0 0 1 -60.982287 0 -89.951731 3 'crystal symmetry operation' 2_445 -x-1,y-1/2,-z -1 0 0 0 1 0 0 0 -1 -80.99 -77.29 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 6 K N N ? 6 T N N ? 6 MA N N ? 6 NA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A O THR 60 A THR 41 1_555 E K K . A K 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.182 ? metalc ? metalc2 A OD1 ASN 94 A ASN 75 1_555 F K K . A K 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.688 ? metalc ? metalc3 A OG SER 96 A SER 77 1_555 F K K . A K 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.852 ? metalc ? metalc4 A OD1 ASP 132 A ASP 113 1_555 F K K . A K 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.726 ? metalc ? metalc5 A O THR 133 A THR 114 1_555 F K K . A K 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.751 ? metalc ? metalc6 A OE1 GLU 291 A GLU 272 1_555 K MG MG . A MG 607 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.393 ? metalc ? metalc7 A OD2 ASP 315 A ASP 296 1_555 K MG MG . A MG 607 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.29 ? metalc ? metalc8 I O1 OXL . A OXL 605 1_555 K MG MG . A MG 607 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.725 ? metalc ? metalc9 I O2 OXL . A OXL 605 1_555 K MG MG . A MG 607 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.102 ? metalc ? metalc10 B OE1 GLU 291 B GLU 272 1_555 T MG MG . B MG 609 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.058 ? metalc ? metalc11 B OD2 ASP 315 B ASP 296 1_555 T MG MG . B MG 609 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.104 ? metalc ? metalc12 R O1 OXL . B OXL 607 1_555 T MG MG . B MG 609 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.231 ? metalc ? metalc13 R O2 OXL . B OXL 607 1_555 T MG MG . B MG 609 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.235 ? metalc ? metalc14 C OD1 ASN 94 C ASN 75 1_555 U K K . C K 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.778 ? metalc ? metalc15 C OG SER 96 C SER 77 1_555 U K K . C K 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.956 ? metalc ? metalc16 C OD1 ASP 132 C ASP 113 1_555 U K K . C K 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.802 ? metalc ? metalc17 C O THR 133 C THR 114 1_555 U K K . C K 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.913 ? metalc ? metalc18 C OG SER 262 C SER 243 1_555 U K K . C K 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.415 ? metalc ? metalc19 C OE1 GLU 291 C GLU 272 1_555 V K K . C K 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.682 ? metalc ? metalc20 C OD2 ASP 315 C ASP 296 1_555 V K K . C K 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.639 ? metalc ? metalc21 V K K . C K 602 1_555 HA O4 OXL . C OXL 614 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.689 ? metalc ? metalc22 V K K . C K 602 1_555 HA O3 OXL . C OXL 614 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.679 ? metalc ? metalc23 D OD2 ASP 315 D ASP 296 1_555 MA MG MG . D MG 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.273 ? metalc ? metalc24 KA O1 OXL . D OXL 602 1_555 MA MG MG . D MG 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.741 ? metalc ? metalc25 KA O2 OXL . D OXL 602 1_555 MA MG MG . D MG 604 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6V74 _atom_sites.fract_transf_matrix[1][1] 0.012347 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002746 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006469 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011117 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 K A 1 601 1 K K . F 2 K A 1 602 6 K K . G 3 GOL A 1 603 1 GOL GOL . H 3 GOL A 1 604 2 GOL GOL . I 4 OXL A 1 605 1 OXL OXL . J 5 FBP A 1 606 1 FBP FBP . K 6 MG A 1 607 2 MG MG . L 7 CL B 1 601 1 CL CL . M 3 GOL B 1 602 3 GOL GOL . N 3 GOL B 1 603 4 GOL GOL . O 3 GOL B 1 604 5 GOL GOL . P 3 GOL B 1 605 14 GOL GOL . Q 3 GOL B 1 606 15 GOL GOL . R 4 OXL B 1 607 2 OXL OXL . S 5 FBP B 1 608 2 FBP FBP . T 6 MG B 1 609 3 MG MG . U 2 K C 1 601 3 K K . V 2 K C 1 602 8 K K . W 7 CL C 1 603 2 CL CL . X 8 ASN C 1 604 1 ASN ASN . Y 3 GOL C 1 605 6 GOL GOL . Z 3 GOL C 1 606 7 GOL GOL . AA 3 GOL C 1 607 8 GOL GOL . BA 3 GOL C 1 608 9 GOL GOL . CA 3 GOL C 1 609 12 GOL GOL . DA 3 GOL C 1 610 13 GOL GOL . EA 3 GOL C 1 611 16 GOL GOL . FA 3 GOL C 1 612 17 GOL GOL . GA 3 GOL C 1 613 18 GOL GOL . HA 4 OXL C 1 614 3 OXL OXL . IA 5 FBP C 1 615 5 FBP FBP . JA 3 GOL D 1 601 11 GOL GOL . KA 4 OXL D 1 602 4 OXL OXL . LA 5 FBP D 1 603 4 FBP FBP . MA 6 MG D 1 604 1 MG MG . NA 6 MG D 1 605 4 MG MG . OA 9 144 D 1 606 1 144 144 . PA 10 HOH A 1 701 105 HOH HOH . PA 10 HOH A 2 702 14 HOH HOH . PA 10 HOH A 3 703 31 HOH HOH . PA 10 HOH A 4 704 109 HOH HOH . PA 10 HOH A 5 705 163 HOH HOH . PA 10 HOH A 6 706 15 HOH HOH . PA 10 HOH A 7 707 4 HOH HOH . PA 10 HOH A 8 708 37 HOH HOH . PA 10 HOH A 9 709 13 HOH HOH . PA 10 HOH A 10 710 23 HOH HOH . PA 10 HOH A 11 711 26 HOH HOH . PA 10 HOH A 12 712 115 HOH HOH . PA 10 HOH A 13 713 161 HOH HOH . PA 10 HOH A 14 714 8 HOH HOH . PA 10 HOH A 15 715 32 HOH HOH . PA 10 HOH A 16 716 1 HOH HOH . PA 10 HOH A 17 717 38 HOH HOH . PA 10 HOH A 18 718 9 HOH HOH . PA 10 HOH A 19 719 157 HOH HOH . PA 10 HOH A 20 720 5 HOH HOH . PA 10 HOH A 21 721 27 HOH HOH . PA 10 HOH A 22 722 24 HOH HOH . PA 10 HOH A 23 723 29 HOH HOH . PA 10 HOH A 24 724 118 HOH HOH . PA 10 HOH A 25 725 10 HOH HOH . PA 10 HOH A 26 726 112 HOH HOH . PA 10 HOH A 27 727 119 HOH HOH . PA 10 HOH A 28 728 106 HOH HOH . PA 10 HOH A 29 729 108 HOH HOH . PA 10 HOH A 30 730 12 HOH HOH . PA 10 HOH A 31 731 20 HOH HOH . PA 10 HOH A 32 732 16 HOH HOH . PA 10 HOH A 33 733 120 HOH HOH . PA 10 HOH A 34 734 146 HOH HOH . PA 10 HOH A 35 735 39 HOH HOH . PA 10 HOH A 36 736 33 HOH HOH . PA 10 HOH A 37 737 122 HOH HOH . PA 10 HOH A 38 738 110 HOH HOH . PA 10 HOH A 39 739 114 HOH HOH . PA 10 HOH A 40 740 121 HOH HOH . PA 10 HOH A 41 741 11 HOH HOH . PA 10 HOH A 42 742 6 HOH HOH . PA 10 HOH A 43 743 158 HOH HOH . PA 10 HOH A 44 744 138 HOH HOH . PA 10 HOH A 45 745 22 HOH HOH . PA 10 HOH A 46 746 113 HOH HOH . PA 10 HOH A 47 747 21 HOH HOH . PA 10 HOH A 48 748 34 HOH HOH . PA 10 HOH A 49 749 62 HOH HOH . PA 10 HOH A 50 750 162 HOH HOH . PA 10 HOH A 51 751 103 HOH HOH . PA 10 HOH A 52 752 164 HOH HOH . PA 10 HOH A 53 753 159 HOH HOH . PA 10 HOH A 54 754 36 HOH HOH . PA 10 HOH A 55 755 18 HOH HOH . PA 10 HOH A 56 756 104 HOH HOH . PA 10 HOH A 57 757 28 HOH HOH . PA 10 HOH A 58 758 111 HOH HOH . PA 10 HOH A 59 759 160 HOH HOH . PA 10 HOH A 60 760 40 HOH HOH . PA 10 HOH A 61 761 63 HOH HOH . QA 10 HOH B 1 701 165 HOH HOH . QA 10 HOH B 2 702 61 HOH HOH . QA 10 HOH B 3 703 58 HOH HOH . QA 10 HOH B 4 704 42 HOH HOH . QA 10 HOH B 5 705 149 HOH HOH . QA 10 HOH B 6 706 47 HOH HOH . QA 10 HOH B 7 707 166 HOH HOH . QA 10 HOH B 8 708 133 HOH HOH . QA 10 HOH B 9 709 139 HOH HOH . QA 10 HOH B 10 710 128 HOH HOH . QA 10 HOH B 11 711 50 HOH HOH . QA 10 HOH B 12 712 54 HOH HOH . QA 10 HOH B 13 713 131 HOH HOH . QA 10 HOH B 14 714 49 HOH HOH . QA 10 HOH B 15 715 52 HOH HOH . QA 10 HOH B 16 716 51 HOH HOH . QA 10 HOH B 17 717 151 HOH HOH . QA 10 HOH B 18 718 129 HOH HOH . QA 10 HOH B 19 719 147 HOH HOH . QA 10 HOH B 20 720 56 HOH HOH . QA 10 HOH B 21 721 123 HOH HOH . QA 10 HOH B 22 722 126 HOH HOH . QA 10 HOH B 23 723 53 HOH HOH . QA 10 HOH B 24 724 150 HOH HOH . QA 10 HOH B 25 725 132 HOH HOH . QA 10 HOH B 26 726 148 HOH HOH . QA 10 HOH B 27 727 57 HOH HOH . QA 10 HOH B 28 728 59 HOH HOH . QA 10 HOH B 29 729 127 HOH HOH . QA 10 HOH B 30 730 60 HOH HOH . QA 10 HOH B 31 731 130 HOH HOH . RA 10 HOH C 1 701 70 HOH HOH . RA 10 HOH C 2 702 89 HOH HOH . RA 10 HOH C 3 703 137 HOH HOH . RA 10 HOH C 4 704 66 HOH HOH . RA 10 HOH C 5 705 152 HOH HOH . RA 10 HOH C 6 706 134 HOH HOH . RA 10 HOH C 7 707 75 HOH HOH . RA 10 HOH C 8 708 140 HOH HOH . RA 10 HOH C 9 709 68 HOH HOH . RA 10 HOH C 10 710 71 HOH HOH . RA 10 HOH C 11 711 87 HOH HOH . RA 10 HOH C 12 712 155 HOH HOH . RA 10 HOH C 13 713 25 HOH HOH . RA 10 HOH C 14 714 69 HOH HOH . RA 10 HOH C 15 715 136 HOH HOH . RA 10 HOH C 16 716 72 HOH HOH . RA 10 HOH C 17 717 153 HOH HOH . RA 10 HOH C 18 718 77 HOH HOH . RA 10 HOH C 19 719 81 HOH HOH . RA 10 HOH C 20 720 74 HOH HOH . RA 10 HOH C 21 721 85 HOH HOH . RA 10 HOH C 22 722 167 HOH HOH . RA 10 HOH C 23 723 78 HOH HOH . RA 10 HOH C 24 724 76 HOH HOH . RA 10 HOH C 25 725 88 HOH HOH . RA 10 HOH C 26 726 67 HOH HOH . RA 10 HOH C 27 727 82 HOH HOH . RA 10 HOH C 28 728 168 HOH HOH . RA 10 HOH C 29 729 86 HOH HOH . RA 10 HOH C 30 730 2 HOH HOH . RA 10 HOH C 31 731 19 HOH HOH . RA 10 HOH C 32 732 116 HOH HOH . RA 10 HOH C 33 733 65 HOH HOH . RA 10 HOH C 34 734 30 HOH HOH . RA 10 HOH C 35 735 84 HOH HOH . RA 10 HOH C 36 736 90 HOH HOH . RA 10 HOH C 37 737 154 HOH HOH . RA 10 HOH C 38 738 101 HOH HOH . RA 10 HOH C 39 739 80 HOH HOH . RA 10 HOH C 40 740 64 HOH HOH . RA 10 HOH C 41 741 135 HOH HOH . SA 10 HOH D 1 701 55 HOH HOH . SA 10 HOH D 2 702 169 HOH HOH . SA 10 HOH D 3 703 102 HOH HOH . SA 10 HOH D 4 704 95 HOH HOH . SA 10 HOH D 5 705 94 HOH HOH . SA 10 HOH D 6 706 100 HOH HOH . SA 10 HOH D 7 707 171 HOH HOH . SA 10 HOH D 8 708 98 HOH HOH . SA 10 HOH D 9 709 142 HOH HOH . SA 10 HOH D 10 710 145 HOH HOH . SA 10 HOH D 11 711 141 HOH HOH . SA 10 HOH D 12 712 97 HOH HOH . SA 10 HOH D 13 713 99 HOH HOH . SA 10 HOH D 14 714 143 HOH HOH . SA 10 HOH D 15 715 174 HOH HOH . SA 10 HOH D 16 716 92 HOH HOH . SA 10 HOH D 17 717 91 HOH HOH . SA 10 HOH D 18 718 173 HOH HOH . SA 10 HOH D 19 719 172 HOH HOH . SA 10 HOH D 20 720 156 HOH HOH . SA 10 HOH D 21 721 170 HOH HOH . SA 10 HOH D 22 722 144 HOH HOH . SA 10 HOH D 23 723 175 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id K _atom_site.label_entity_id 6 _atom_site.Cartn_x -26.535 _atom_site.Cartn_y 33.151 _atom_site.Cartn_z -5.875 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 42.59 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 607 _atom_site.auth_asym_id A _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 14 _model_server_stats.parse_time_ms 12 _model_server_stats.create_model_time_ms 33 _model_server_stats.query_time_ms 326 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 1 #