data_6V76 # _model_server_result.job_id 4N6CeooLBcuo3Ux_CUcrzw _model_server_result.datetime_utc '2024-11-04 22:19:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6v76 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"T","auth_seq_id":601}' # _entry.id 6V76 # _exptl.entry_id 6V76 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 24.305 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'MAGNESIUM ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 102.36 _cell.angle_gamma 90 _cell.entry_id 6V76 _cell.length_a 81.04 _cell.length_b 154.98 _cell.length_c 91.96 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6V76 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E,F,G,H,I,J,K,L,M,N,O,T,U,V,W,X,Y,DA,FA 1 1 D,Z,AA,BA,CA,GA 1 2 B,P,Q,R,S,EA 1 3 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 1_454 x-1,y,z-1 1 0 0 0 1 0 0 0 1 -61.355647 0 -89.828547 3 'crystal symmetry operation' 2_445 -x-1,y-1/2,-z -1 0 0 0 1 0 0 0 -1 -81.04 -77.49 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 G N N ? 4 T N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OD1 ASN 94 C ASN 75 1_555 F K K . C K 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.688 ? metalc ? metalc2 A OG SER 96 C SER 77 1_555 F K K . C K 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.12 ? metalc ? metalc3 A OD1 ASP 132 C ASP 113 1_555 F K K . C K 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.797 ? metalc ? metalc4 A O THR 133 C THR 114 1_555 F K K . C K 602 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.749 ? metalc ? metalc5 A OE1 GLU 291 C GLU 272 1_555 G MG MG . C MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.202 ? metalc ? metalc6 A OD2 ASP 315 C ASP 296 1_555 G MG MG . C MG 603 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? metalc ? metalc7 G MG MG . C MG 603 1_555 N O1 OXL . C OXL 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.595 ? metalc ? metalc8 G MG MG . C MG 603 1_555 N O2 OXL . C OXL 610 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.328 ? metalc ? metalc9 C OE2 GLU 291 B GLU 272 1_555 T MG MG . B MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.317 ? metalc ? metalc10 C OD2 ASP 315 B ASP 296 1_555 T MG MG . B MG 601 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.249 ? metalc ? metalc11 T MG MG . B MG 601 1_555 X O3 OXL . B OXL 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.525 ? metalc ? metalc12 T MG MG . B MG 601 1_555 X O4 OXL . B OXL 605 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.454 ? # _chem_comp.formula 'Mg 2' _chem_comp.formula_weight 24.305 _chem_comp.id MG _chem_comp.mon_nstd_flag . _chem_comp.name 'MAGNESIUM ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6V76 _atom_sites.fract_transf_matrix[1][1] 0.01234 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002703 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006452 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011132 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 CL C 1 601 2 CL CL . F 3 K C 1 602 3 K K . G 4 MG C 1 603 3 MG MG . H 5 FBP C 1 604 4 FBP FBP . I 6 GOL C 1 605 5 GOL GOL . J 6 GOL C 1 606 6 GOL GOL . K 6 GOL C 1 607 7 GOL GOL . L 6 GOL C 1 608 8 GOL GOL . M 6 GOL C 1 609 9 GOL GOL . N 7 OXL C 1 610 1 OXL OXL . O 8 VAL C 1 611 601 VAL VAL . P 2 CL A 1 601 1 CL CL . Q 5 FBP A 1 602 1 FBP FBP . R 6 GOL A 1 603 10 GOL GOL . S 6 GOL A 1 604 11 GOL GOL . T 4 MG B 1 601 2 MG MG . U 5 FBP B 1 602 2 FBP FBP . V 6 GOL B 1 603 1 GOL GOL . W 6 GOL B 1 604 12 GOL GOL . X 7 OXL B 1 605 3 OXL OXL . Y 8 VAL B 1 606 601 VAL VAL . Z 5 FBP D 1 601 3 FBP FBP . AA 6 GOL D 1 602 2 GOL GOL . BA 6 GOL D 1 603 3 GOL GOL . CA 6 GOL D 1 604 4 GOL GOL . DA 9 HOH C 1 701 43 HOH HOH . DA 9 HOH C 2 702 42 HOH HOH . DA 9 HOH C 3 703 50 HOH HOH . DA 9 HOH C 4 704 44 HOH HOH . DA 9 HOH C 5 705 47 HOH HOH . DA 9 HOH C 6 706 53 HOH HOH . DA 9 HOH C 7 707 49 HOH HOH . DA 9 HOH C 8 708 34 HOH HOH . DA 9 HOH C 9 709 45 HOH HOH . DA 9 HOH C 10 710 48 HOH HOH . DA 9 HOH C 11 711 46 HOH HOH . DA 9 HOH C 12 712 33 HOH HOH . DA 9 HOH C 13 713 51 HOH HOH . DA 9 HOH C 14 714 35 HOH HOH . EA 9 HOH A 1 701 66 HOH HOH . EA 9 HOH A 2 702 16 HOH HOH . EA 9 HOH A 3 703 65 HOH HOH . EA 9 HOH A 4 704 14 HOH HOH . EA 9 HOH A 5 705 6 HOH HOH . EA 9 HOH A 6 706 58 HOH HOH . EA 9 HOH A 7 707 64 HOH HOH . EA 9 HOH A 8 708 18 HOH HOH . EA 9 HOH A 9 709 67 HOH HOH . EA 9 HOH A 10 710 59 HOH HOH . EA 9 HOH A 11 711 57 HOH HOH . EA 9 HOH A 12 712 5 HOH HOH . EA 9 HOH A 13 713 17 HOH HOH . EA 9 HOH A 14 714 15 HOH HOH . EA 9 HOH A 15 715 20 HOH HOH . EA 9 HOH A 16 716 19 HOH HOH . EA 9 HOH A 17 717 4 HOH HOH . EA 9 HOH A 18 718 55 HOH HOH . EA 9 HOH A 19 719 21 HOH HOH . EA 9 HOH A 20 720 56 HOH HOH . EA 9 HOH A 21 721 2 HOH HOH . EA 9 HOH A 22 722 3 HOH HOH . FA 9 HOH B 1 701 7 HOH HOH . FA 9 HOH B 2 702 61 HOH HOH . FA 9 HOH B 3 703 11 HOH HOH . FA 9 HOH B 4 704 28 HOH HOH . FA 9 HOH B 5 705 12 HOH HOH . FA 9 HOH B 6 706 23 HOH HOH . FA 9 HOH B 7 707 52 HOH HOH . FA 9 HOH B 8 708 29 HOH HOH . FA 9 HOH B 9 709 9 HOH HOH . FA 9 HOH B 10 710 41 HOH HOH . FA 9 HOH B 11 711 24 HOH HOH . FA 9 HOH B 12 712 30 HOH HOH . FA 9 HOH B 13 713 27 HOH HOH . FA 9 HOH B 14 714 22 HOH HOH . FA 9 HOH B 15 715 10 HOH HOH . FA 9 HOH B 16 716 8 HOH HOH . FA 9 HOH B 17 717 31 HOH HOH . FA 9 HOH B 18 718 26 HOH HOH . FA 9 HOH B 19 719 25 HOH HOH . GA 9 HOH D 1 701 63 HOH HOH . GA 9 HOH D 2 702 13 HOH HOH . GA 9 HOH D 3 703 39 HOH HOH . GA 9 HOH D 4 704 37 HOH HOH . GA 9 HOH D 5 705 62 HOH HOH . GA 9 HOH D 6 706 32 HOH HOH . GA 9 HOH D 7 707 54 HOH HOH . GA 9 HOH D 8 708 36 HOH HOH . GA 9 HOH D 9 709 40 HOH HOH . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol MG _atom_site.label_atom_id MG _atom_site.label_comp_id MG _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id T _atom_site.label_entity_id 4 _atom_site.Cartn_x -58.31 _atom_site.Cartn_y 28.547 _atom_site.Cartn_z 13.2 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 60.71 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id MG _atom_site.auth_comp_id MG _atom_site.auth_seq_id 601 _atom_site.auth_asym_id B _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 13 _model_server_stats.parse_time_ms 24 _model_server_stats.create_model_time_ms 32 _model_server_stats.query_time_ms 307 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 1 #