data_6V7Z # _model_server_result.job_id 5RrRgHfvzCJZtOnjB9AxoA _model_server_result.datetime_utc '2024-10-11 02:20:28' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6v7z # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"P","auth_seq_id":101}' # _entry.id 6V7Z # _exptl.entry_id 6V7Z _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 11 _entity.src_method man _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6V7Z _cell.length_a 67.717 _cell.length_b 121.933 _cell.length_c 172.136 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6V7Z _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? trimeric 3 author_defined_assembly 1 ? trimeric 3 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,B,F,G,H,K,L,M,N,O,P,Q,U,V,Z 1 1 C,D,E,I,J,R,S,T,W,X,Y 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 11 _struct_asym.id P _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 4 oligosaccharide 5 oligosaccharide 6 oligosaccharide # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.details _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.atom_stereo_config_1 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.atom_stereo_config_2 _pdbx_entity_branch_link.value_order 1 ? 4 2 1 NAG NAG C1 O1 . O4 HO4 . sing 2 ? 5 2 1 BMA NAG C1 O1 . O4 HO4 . sing 3 ? 6 2 1 NAG NAG C1 O1 . O4 HO4 . sing 4 ? 6 3 2 BMA NAG C1 O1 . O4 HO4 . sing # loop_ _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.hetero _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.auth_mon_id 4 n G NAG 1 G 1 NAG A 284 NAG 4 n G NAG 2 G 2 NAG A 289 NAG 5 n H NAG 1 H 1 NAG A 286 NAG 5 n H BMA 2 H 2 BMA A 287 BMA 6 n I NAG 1 I 1 NAG C 278 NAG 6 n I NAG 2 I 2 NAG C 282 NAG 6 n I BMA 3 I 3 BMA C 283 BMA 4 n J NAG 1 J 1 NAG C 280 NAG 4 n J NAG 2 J 2 NAG C 284 NAG # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 99 A CYS 102 1_555 A SG CYS 163 A CYS 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.092 ? disulf ? disulf2 A SG CYS 203 A CYS 206 1_555 A SG CYS 258 A CYS 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.024 ? disulf ? disulf3 B SG CYS 26 B CYS 25 1_555 B SG CYS 81 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf4 C SG CYS 99 C CYS 102 1_555 C SG CYS 163 C CYS 166 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.096 ? disulf ? disulf5 C SG CYS 203 C CYS 206 1_555 C SG CYS 258 C CYS 261 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.038 ? disulf ? disulf6 D SG CYS 26 D CYS 25 1_555 D SG CYS 81 D CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.045 ? disulf ? disulf7 E SG CYS 22 E CYS 22 1_555 E SG CYS 95 E CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.025 ? disulf ? disulf8 F SG CYS 22 F CYS 22 1_555 F SG CYS 95 F CYS 95 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.049 ? covale ? covale1 A ND2 ASN 17 A ASN 20 1_555 G C1 NAG . G NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.462 ? covale ? covale2 A ND2 ASN 39 A ASN 42 1_555 H C1 NAG . H NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.455 ? covale ? covale3 A ND2 ASN 160 A ASN 163 1_555 K C1 NAG . A NAG 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.436 ? covale ? covale4 C ND2 ASN 17 C ASN 20 1_555 I C1 NAG . I NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.456 ? covale ? covale5 C ND2 ASN 39 C ASN 42 1_555 J C1 NAG . J NAG 1 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.444 ? covale ? covale6 G O4 NAG . G NAG 1 1_555 G C1 NAG . G NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.441 ? covale ? covale7 H O4 NAG . H NAG 1 1_555 H C1 BMA . H BMA 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.44 ? covale ? covale8 I O4 NAG . I NAG 1 1_555 I C1 NAG . I NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.445 ? covale ? covale9 I O4 NAG . I NAG 2 1_555 I C1 BMA . I BMA 3 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.456 ? covale ? covale10 J O4 NAG . J NAG 1 1_555 J C1 NAG . J NAG 2 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.455 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 543 n n S O2 SO4 doub 544 n n S O3 SO4 sing 545 n n S O4 SO4 sing 546 n n # _atom_sites.entry_id 6V7Z _atom_sites.fract_transf_matrix[1][1] 0.014767 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008201 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005809 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code K 7 NAG A 1 401 288 NAG NAG . L 8 AGH A 1 402 300 AGH AGH . M 9 PEG A 1 403 1 PEG PEG . N 9 PEG A 1 404 2 PEG PEG . O 10 CL A 1 405 1 CL CL . P 11 SO4 B 1 101 101 SO4 SO4 . Q 12 BGC B 1 102 1 BGC BGC . R 8 AGH C 1 401 301 AGH AGH . S 13 NA D 1 101 1 NA NA . T 9 PEG E 1 201 3 PEG PEG . U 14 HOH A 1 501 9 HOH HOH . U 14 HOH A 2 502 1 HOH HOH . U 14 HOH A 3 503 11 HOH HOH . U 14 HOH A 4 504 5 HOH HOH . U 14 HOH A 5 505 65 HOH HOH . U 14 HOH A 6 506 23 HOH HOH . U 14 HOH A 7 507 12 HOH HOH . U 14 HOH A 8 508 58 HOH HOH . U 14 HOH A 9 509 32 HOH HOH . U 14 HOH A 10 510 39 HOH HOH . U 14 HOH A 11 511 38 HOH HOH . U 14 HOH A 12 512 61 HOH HOH . U 14 HOH A 13 513 40 HOH HOH . V 14 HOH B 1 201 6 HOH HOH . V 14 HOH B 2 202 2 HOH HOH . V 14 HOH B 3 203 7 HOH HOH . V 14 HOH B 4 204 43 HOH HOH . V 14 HOH B 5 205 15 HOH HOH . V 14 HOH B 6 206 60 HOH HOH . V 14 HOH B 7 207 56 HOH HOH . V 14 HOH B 8 208 57 HOH HOH . V 14 HOH B 9 209 20 HOH HOH . V 14 HOH B 10 210 55 HOH HOH . V 14 HOH B 11 211 27 HOH HOH . V 14 HOH B 12 212 13 HOH HOH . V 14 HOH B 13 213 54 HOH HOH . V 14 HOH B 14 214 41 HOH HOH . V 14 HOH B 15 215 25 HOH HOH . V 14 HOH B 16 216 30 HOH HOH . V 14 HOH B 17 217 26 HOH HOH . W 14 HOH C 1 501 16 HOH HOH . W 14 HOH C 2 502 10 HOH HOH . W 14 HOH C 3 503 64 HOH HOH . W 14 HOH C 4 504 35 HOH HOH . W 14 HOH C 5 505 14 HOH HOH . W 14 HOH C 6 506 52 HOH HOH . W 14 HOH C 7 507 29 HOH HOH . W 14 HOH C 8 508 36 HOH HOH . W 14 HOH C 9 509 44 HOH HOH . W 14 HOH C 10 510 33 HOH HOH . W 14 HOH C 11 511 50 HOH HOH . W 14 HOH C 12 512 53 HOH HOH . W 14 HOH C 13 513 34 HOH HOH . W 14 HOH C 14 514 19 HOH HOH . W 14 HOH C 15 515 51 HOH HOH . W 14 HOH C 16 516 28 HOH HOH . W 14 HOH C 17 517 18 HOH HOH . W 14 HOH C 18 518 66 HOH HOH . W 14 HOH C 19 519 63 HOH HOH . X 14 HOH D 1 201 31 HOH HOH . X 14 HOH D 2 202 67 HOH HOH . X 14 HOH D 3 203 42 HOH HOH . X 14 HOH D 4 204 45 HOH HOH . X 14 HOH D 5 205 4 HOH HOH . Y 14 HOH E 1 301 24 HOH HOH . Y 14 HOH E 2 302 17 HOH HOH . Y 14 HOH E 3 303 47 HOH HOH . Y 14 HOH E 4 304 46 HOH HOH . Z 14 HOH F 1 201 8 HOH HOH . Z 14 HOH F 2 202 62 HOH HOH . Z 14 HOH F 3 203 3 HOH HOH . Z 14 HOH F 4 204 48 HOH HOH . Z 14 HOH F 5 205 22 HOH HOH . Z 14 HOH F 6 206 21 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . P 11 21.583 -7.21 -16.673 1 119.99 ? S SO4 101 B 1 HETATM 2 O O1 SO4 . . . P 11 22.194 -5.887 -16.803 1 114.95 ? O1 SO4 101 B 1 HETATM 3 O O2 SO4 . . . P 11 21.898 -7.962 -17.886 1 123.86 ? O2 SO4 101 B 1 HETATM 4 O O3 SO4 . . . P 11 20.127 -7.086 -16.534 1 123.05 ? O3 SO4 101 B 1 HETATM 5 O O4 SO4 . . . P 11 22.13 -7.912 -15.509 1 121.47 ? O4 SO4 101 B 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 9 _model_server_stats.query_time_ms 330 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 5 #