data_6V89
#
_model_server_result.job_id            rdoL06W--ZI3l97UpQ_PnQ 
_model_server_result.datetime_utc      '2024-12-21 16:55:40' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6v89 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":503}' 
#
_entry.id    6V89 
#
_exptl.entry_id    6V89 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              35.453 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'CHLORIDE ION' 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         120 
_cell.entry_id            6V89 
_cell.length_a            88.944 
_cell.length_b            88.944 
_cell.length_c            163.72 
_cell.Z_PDB               12 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6V89 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        181 
_symmetry.space_group_name_Hall    'P 64 2 (x,y,z+1/6)' 
_symmetry.space_group_name_H-M     'P 64 2 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1,2 
#
loop_
_pdbx_struct_oper_list.id
_pdbx_struct_oper_list.type
_pdbx_struct_oper_list.name
_pdbx_struct_oper_list.symmetry_operation
_pdbx_struct_oper_list.matrix[1][1]
_pdbx_struct_oper_list.matrix[1][2]
_pdbx_struct_oper_list.matrix[1][3]
_pdbx_struct_oper_list.matrix[2][1]
_pdbx_struct_oper_list.matrix[2][2]
_pdbx_struct_oper_list.matrix[2][3]
_pdbx_struct_oper_list.matrix[3][1]
_pdbx_struct_oper_list.matrix[3][2]
_pdbx_struct_oper_list.matrix[3][3]
_pdbx_struct_oper_list.vector[1]
_pdbx_struct_oper_list.vector[2]
_pdbx_struct_oper_list.vector[3]
1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 
2 'crystal symmetry operation' 12_564 x,x-y+1,-z-1/3 0.5 0.866025 0 0.866025 -0.5 0 0 0 -1 -44.472 77.027764 -54.573333 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 3 C N N 
? 3 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
metalc ? metalc1 E CA CA . A CA 504 1_555 F O HOH . A HOH 607 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.647 ? 
metalc ? metalc2 E CA CA . A CA 504 1_555 F O HOH . A HOH 620 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.543 ? 
metalc ? metalc3 E CA CA . A CA 504 1_555 F O HOH . A HOH 651 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.691 ? 
metalc ? metalc4 E CA CA . A CA 504 1_555 F O HOH . A HOH 657 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.737 ? 
metalc ? metalc5 E CA CA . A CA 504 1_555 F O HOH . A HOH 672 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.711 ? 
metalc ? metalc6 E CA CA . A CA 504 1_555 F O HOH . A HOH 713 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.375 ? 
#
_chem_comp.formula           'Cl -1' 
_chem_comp.formula_weight    35.453 
_chem_comp.id                CL 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'CHLORIDE ION' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
_atom_sites.entry_id                     6V89 
_atom_sites.fract_transf_matrix[1][1]    0.011243 
_atom_sites.fract_transf_matrix[1][2]    0.006491 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.012982 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.006108 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
B 2 AMP A 1 501 501 AMP AMP . 
C 3 CL A 1 502 2 CL CL . 
D 3 CL A 1 503 3 CL CL . 
E 4 CA A 1 504 1 CA CA . 
F 5 HOH A 1 601 78 HOH HOH . 
F 5 HOH A 2 602 57 HOH HOH . 
F 5 HOH A 3 603 3 HOH HOH . 
F 5 HOH A 4 604 27 HOH HOH . 
F 5 HOH A 5 605 45 HOH HOH . 
F 5 HOH A 6 606 13 HOH HOH . 
F 5 HOH A 7 607 70 HOH HOH . 
F 5 HOH A 8 608 82 HOH HOH . 
F 5 HOH A 9 609 37 HOH HOH . 
F 5 HOH A 10 610 79 HOH HOH . 
F 5 HOH A 11 611 49 HOH HOH . 
F 5 HOH A 12 612 60 HOH HOH . 
F 5 HOH A 13 613 95 HOH HOH . 
F 5 HOH A 14 614 122 HOH HOH . 
F 5 HOH A 15 615 114 HOH HOH . 
F 5 HOH A 16 616 43 HOH HOH . 
F 5 HOH A 17 617 25 HOH HOH . 
F 5 HOH A 18 618 44 HOH HOH . 
F 5 HOH A 19 619 34 HOH HOH . 
F 5 HOH A 20 620 104 HOH HOH . 
F 5 HOH A 21 621 26 HOH HOH . 
F 5 HOH A 22 622 42 HOH HOH . 
F 5 HOH A 23 623 22 HOH HOH . 
F 5 HOH A 24 624 64 HOH HOH . 
F 5 HOH A 25 625 151 HOH HOH . 
F 5 HOH A 26 626 24 HOH HOH . 
F 5 HOH A 27 627 10 HOH HOH . 
F 5 HOH A 28 628 39 HOH HOH . 
F 5 HOH A 29 629 19 HOH HOH . 
F 5 HOH A 30 630 134 HOH HOH . 
F 5 HOH A 31 631 118 HOH HOH . 
F 5 HOH A 32 632 20 HOH HOH . 
F 5 HOH A 33 633 116 HOH HOH . 
F 5 HOH A 34 634 139 HOH HOH . 
F 5 HOH A 35 635 11 HOH HOH . 
F 5 HOH A 36 636 15 HOH HOH . 
F 5 HOH A 37 637 130 HOH HOH . 
F 5 HOH A 38 638 9 HOH HOH . 
F 5 HOH A 39 639 33 HOH HOH . 
F 5 HOH A 40 640 41 HOH HOH . 
F 5 HOH A 41 641 128 HOH HOH . 
F 5 HOH A 42 642 98 HOH HOH . 
F 5 HOH A 43 643 16 HOH HOH . 
F 5 HOH A 44 644 28 HOH HOH . 
F 5 HOH A 45 645 17 HOH HOH . 
F 5 HOH A 46 646 91 HOH HOH . 
F 5 HOH A 47 647 5 HOH HOH . 
F 5 HOH A 48 648 146 HOH HOH . 
F 5 HOH A 49 649 100 HOH HOH . 
F 5 HOH A 50 650 18 HOH HOH . 
F 5 HOH A 51 651 48 HOH HOH . 
F 5 HOH A 52 652 14 HOH HOH . 
F 5 HOH A 53 653 12 HOH HOH . 
F 5 HOH A 54 654 6 HOH HOH . 
F 5 HOH A 55 655 107 HOH HOH . 
F 5 HOH A 56 656 145 HOH HOH . 
F 5 HOH A 57 657 68 HOH HOH . 
F 5 HOH A 58 658 137 HOH HOH . 
F 5 HOH A 59 659 46 HOH HOH . 
F 5 HOH A 60 660 112 HOH HOH . 
F 5 HOH A 61 661 94 HOH HOH . 
F 5 HOH A 62 662 81 HOH HOH . 
F 5 HOH A 63 663 35 HOH HOH . 
F 5 HOH A 64 664 30 HOH HOH . 
F 5 HOH A 65 665 120 HOH HOH . 
F 5 HOH A 66 666 53 HOH HOH . 
F 5 HOH A 67 667 38 HOH HOH . 
F 5 HOH A 68 668 149 HOH HOH . 
F 5 HOH A 69 669 84 HOH HOH . 
F 5 HOH A 70 670 72 HOH HOH . 
F 5 HOH A 71 671 121 HOH HOH . 
F 5 HOH A 72 672 147 HOH HOH . 
F 5 HOH A 73 673 21 HOH HOH . 
F 5 HOH A 74 674 148 HOH HOH . 
F 5 HOH A 75 675 126 HOH HOH . 
F 5 HOH A 76 676 23 HOH HOH . 
F 5 HOH A 77 677 51 HOH HOH . 
F 5 HOH A 78 678 66 HOH HOH . 
F 5 HOH A 79 679 97 HOH HOH . 
F 5 HOH A 80 680 96 HOH HOH . 
F 5 HOH A 81 681 47 HOH HOH . 
F 5 HOH A 82 682 77 HOH HOH . 
F 5 HOH A 83 683 90 HOH HOH . 
F 5 HOH A 84 684 88 HOH HOH . 
F 5 HOH A 85 685 162 HOH HOH . 
F 5 HOH A 86 686 63 HOH HOH . 
F 5 HOH A 87 687 135 HOH HOH . 
F 5 HOH A 88 688 65 HOH HOH . 
F 5 HOH A 89 689 124 HOH HOH . 
F 5 HOH A 90 690 85 HOH HOH . 
F 5 HOH A 91 691 99 HOH HOH . 
F 5 HOH A 92 692 127 HOH HOH . 
F 5 HOH A 93 693 119 HOH HOH . 
F 5 HOH A 94 694 93 HOH HOH . 
F 5 HOH A 95 695 74 HOH HOH . 
F 5 HOH A 96 696 62 HOH HOH . 
F 5 HOH A 97 697 108 HOH HOH . 
F 5 HOH A 98 698 123 HOH HOH . 
F 5 HOH A 99 699 117 HOH HOH . 
F 5 HOH A 100 700 102 HOH HOH . 
F 5 HOH A 101 701 111 HOH HOH . 
F 5 HOH A 102 702 153 HOH HOH . 
F 5 HOH A 103 703 115 HOH HOH . 
F 5 HOH A 104 704 67 HOH HOH . 
F 5 HOH A 105 705 54 HOH HOH . 
F 5 HOH A 106 706 71 HOH HOH . 
F 5 HOH A 107 707 89 HOH HOH . 
F 5 HOH A 108 708 8 HOH HOH . 
F 5 HOH A 109 709 58 HOH HOH . 
F 5 HOH A 110 710 113 HOH HOH . 
F 5 HOH A 111 711 182 HOH HOH . 
F 5 HOH A 112 712 50 HOH HOH . 
F 5 HOH A 113 713 69 HOH HOH . 
F 5 HOH A 114 714 75 HOH HOH . 
F 5 HOH A 115 715 141 HOH HOH . 
F 5 HOH A 116 716 80 HOH HOH . 
F 5 HOH A 117 717 154 HOH HOH . 
F 5 HOH A 118 718 183 HOH HOH . 
F 5 HOH A 119 719 76 HOH HOH . 
F 5 HOH A 120 720 156 HOH HOH . 
F 5 HOH A 121 721 106 HOH HOH . 
F 5 HOH A 122 722 109 HOH HOH . 
F 5 HOH A 123 723 52 HOH HOH . 
F 5 HOH A 124 724 129 HOH HOH . 
F 5 HOH A 125 725 32 HOH HOH . 
F 5 HOH A 126 726 184 HOH HOH . 
F 5 HOH A 127 727 157 HOH HOH . 
F 5 HOH A 128 728 131 HOH HOH . 
F 5 HOH A 129 729 176 HOH HOH . 
F 5 HOH A 130 730 59 HOH HOH . 
F 5 HOH A 131 731 158 HOH HOH . 
F 5 HOH A 132 732 159 HOH HOH . 
F 5 HOH A 133 733 175 HOH HOH . 
F 5 HOH A 134 734 36 HOH HOH . 
F 5 HOH A 135 735 165 HOH HOH . 
F 5 HOH A 136 736 174 HOH HOH . 
F 5 HOH A 137 737 86 HOH HOH . 
F 5 HOH A 138 738 177 HOH HOH . 
F 5 HOH A 139 739 166 HOH HOH . 
F 5 HOH A 140 740 56 HOH HOH . 
F 5 HOH A 141 741 164 HOH HOH . 
F 5 HOH A 142 742 181 HOH HOH . 
F 5 HOH A 143 743 180 HOH HOH . 
F 5 HOH A 144 744 87 HOH HOH . 
F 5 HOH A 145 745 161 HOH HOH . 
F 5 HOH A 146 746 160 HOH HOH . 
F 5 HOH A 147 747 178 HOH HOH . 
F 5 HOH A 148 748 167 HOH HOH . 
F 5 HOH A 149 749 169 HOH HOH . 
F 5 HOH A 150 750 179 HOH HOH . 
F 5 HOH A 151 751 168 HOH HOH . 
F 5 HOH A 152 752 170 HOH HOH . 
#
_atom_site.group_PDB             HETATM 
_atom_site.id                    1 
_atom_site.type_symbol           CL 
_atom_site.label_atom_id         CL 
_atom_site.label_comp_id         CL 
_atom_site.label_seq_id          . 
_atom_site.label_alt_id          . 
_atom_site.pdbx_PDB_ins_code     . 
_atom_site.label_asym_id         D 
_atom_site.label_entity_id       3 
_atom_site.Cartn_x               -10.789 
_atom_site.Cartn_y               52.651 
_atom_site.Cartn_z               -43.205 
_atom_site.occupancy             1 
_atom_site.B_iso_or_equiv        44.46 
_atom_site.pdbx_formal_charge    ? 
_atom_site.auth_atom_id          CL 
_atom_site.auth_comp_id          CL 
_atom_site.auth_seq_id           503 
_atom_site.auth_asym_id          A 
_atom_site.pdbx_PDB_model_num    1 
#
_model_server_stats.io_time_ms              14 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           249 
_model_server_stats.encode_time_ms          8 
_model_server_stats.element_count           1 
#