data_6V8I # _model_server_result.job_id 3yoCwqLmv2p-LDRhGrMlEw _model_server_result.datetime_utc '2024-10-19 17:18:58' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6v8i # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"YB","auth_seq_id":701}' # _entry.id 6V8I # _exptl.entry_id 6V8I _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 55.845 _entity.id 8 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'FE (III) ION' _entity.pdbx_number_of_molecules 6 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6V8I _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6V8I _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details 72-meric _pdbx_struct_assembly.oligomeric_count 72 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,NA,OA,PA,QA,RA,SA,TA,UA,VA,WA,XA,YA,ZA,AB,BB,CB,DB,EB,FB,GB,HB,IB,JB,KB,LB,MB,NB,OB,PB,QB,RB,SB,TB,UB,VB,WB,XB,YB,ZB _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 8 UB N N ? 8 VB N N ? 8 WB N N ? 8 XB N N ? 8 YB N N ? 8 ZB N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 CB NE2 HIS 42 BH HIS 42 1_555 UB FE FE . BH FE 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.171 ? metalc ? metalc2 CB NE2 HIS 50 BH HIS 50 1_555 UB FE FE . BH FE 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.494 ? metalc ? metalc3 UB FE FE . BH FE 701 1_555 DB NE2 HIS 42 BG HIS 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.121 ? metalc ? metalc4 UB FE FE . BH FE 701 1_555 DB NE2 HIS 50 BG HIS 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.376 ? metalc ? metalc5 UB FE FE . BH FE 701 1_555 EB NE2 HIS 42 BI HIS 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.419 ? metalc ? metalc6 UB FE FE . BH FE 701 1_555 EB NE2 HIS 50 BI HIS 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.16 ? metalc ? metalc7 FB NE2 HIS 42 DH HIS 42 1_555 VB FE FE . DH FE 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.182 ? metalc ? metalc8 FB NE2 HIS 50 DH HIS 50 1_555 VB FE FE . DH FE 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.399 ? metalc ? metalc9 VB FE FE . DH FE 701 1_555 GB NE2 HIS 42 DG HIS 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.175 ? metalc ? metalc10 VB FE FE . DH FE 701 1_555 GB NE2 HIS 50 DG HIS 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.379 ? metalc ? metalc11 VB FE FE . DH FE 701 1_555 HB NE2 HIS 42 DI HIS 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.397 ? metalc ? metalc12 VB FE FE . DH FE 701 1_555 HB NE2 HIS 50 DI HIS 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.147 ? metalc ? metalc13 IB NE2 HIS 42 AH HIS 42 1_555 WB FE FE . AH FE 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.189 ? metalc ? metalc14 IB NE2 HIS 50 AH HIS 50 1_555 WB FE FE . AH FE 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.507 ? metalc ? metalc15 WB FE FE . AH FE 701 1_555 JB NE2 HIS 42 AG HIS 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.118 ? metalc ? metalc16 WB FE FE . AH FE 701 1_555 JB NE2 HIS 50 AG HIS 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.386 ? metalc ? metalc17 WB FE FE . AH FE 701 1_555 KB NE2 HIS 42 AI HIS 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.434 ? metalc ? metalc18 WB FE FE . AH FE 701 1_555 KB NE2 HIS 50 AI HIS 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.15 ? metalc ? metalc19 LB NE2 HIS 42 FH HIS 42 1_555 XB FE FE . FH FE 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.173 ? metalc ? metalc20 LB NE2 HIS 50 FH HIS 50 1_555 XB FE FE . FH FE 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.489 ? metalc ? metalc21 XB FE FE . FH FE 701 1_555 MB NE2 HIS 42 FG HIS 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.119 ? metalc ? metalc22 XB FE FE . FH FE 701 1_555 MB NE2 HIS 50 FG HIS 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.367 ? metalc ? metalc23 XB FE FE . FH FE 701 1_555 NB NE2 HIS 42 FI HIS 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? metalc ? metalc24 XB FE FE . FH FE 701 1_555 NB NE2 HIS 50 FI HIS 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.167 ? metalc ? metalc25 OB NE2 HIS 42 CH HIS 42 1_555 YB FE FE . CH FE 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.172 ? metalc ? metalc26 OB NE2 HIS 50 CH HIS 50 1_555 YB FE FE . CH FE 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.413 ? metalc ? metalc27 YB FE FE . CH FE 701 1_555 PB NE2 HIS 42 CG HIS 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.144 ? metalc ? metalc28 YB FE FE . CH FE 701 1_555 PB NE2 HIS 50 CG HIS 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.359 ? metalc ? metalc29 YB FE FE . CH FE 701 1_555 QB NE2 HIS 42 CI HIS 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.393 ? metalc ? metalc30 YB FE FE . CH FE 701 1_555 QB NE2 HIS 50 CI HIS 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.143 ? metalc ? metalc31 RB NE2 HIS 42 EH HIS 42 1_555 ZB FE FE . EH FE 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.188 ? metalc ? metalc32 RB NE2 HIS 50 EH HIS 50 1_555 ZB FE FE . EH FE 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.507 ? metalc ? metalc33 ZB FE FE . EH FE 701 1_555 SB NE2 HIS 42 EG HIS 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.117 ? metalc ? metalc34 ZB FE FE . EH FE 701 1_555 SB NE2 HIS 50 EG HIS 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.377 ? metalc ? metalc35 ZB FE FE . EH FE 701 1_555 TB NE2 HIS 42 EI HIS 42 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.424 ? metalc ? metalc36 ZB FE FE . EH FE 701 1_555 TB NE2 HIS 50 EI HIS 50 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.152 ? # _chem_comp.formula 'Fe 3' _chem_comp.formula_weight 55.845 _chem_comp.id FE _chem_comp.mon_nstd_flag . _chem_comp.name 'FE (III) ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6V8I _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code UB 8 FE BH 1 701 701 FE FE . VB 8 FE DH 1 701 701 FE FE . WB 8 FE AH 1 701 701 FE FE . XB 8 FE FH 1 701 701 FE FE . YB 8 FE CH 1 701 701 FE FE . ZB 8 FE EH 1 701 701 FE FE . # _atom_site.group_PDB HETATM _atom_site.id 1 _atom_site.type_symbol FE _atom_site.label_atom_id FE _atom_site.label_comp_id FE _atom_site.label_seq_id . _atom_site.label_alt_id . _atom_site.pdbx_PDB_ins_code . _atom_site.label_asym_id YB _atom_site.label_entity_id 8 _atom_site.Cartn_x 260.599 _atom_site.Cartn_y 272.725 _atom_site.Cartn_z 298.843 _atom_site.occupancy 1 _atom_site.B_iso_or_equiv 57.68 _atom_site.pdbx_formal_charge ? _atom_site.auth_atom_id FE _atom_site.auth_comp_id FE _atom_site.auth_seq_id 701 _atom_site.auth_asym_id CH _atom_site.pdbx_PDB_model_num 1 # _model_server_stats.io_time_ms 300 _model_server_stats.parse_time_ms 30 _model_server_stats.create_model_time_ms 581 _model_server_stats.query_time_ms 304 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 1 #