data_6V8L # _model_server_result.job_id M0LtccgSGfXsUy-1ddTR9Q _model_server_result.datetime_utc '2024-11-12 20:42:41' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6v8l # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"I","auth_seq_id":201}' # _entry.id 6V8L # _exptl.entry_id 6V8L _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 312.53 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'icosanoic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 96.58 _cell.angle_gamma 90 _cell.entry_id 6V8L _cell.length_a 39.913 _cell.length_b 110.565 _cell.length_c 65.772 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6V8L _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 ? monomeric 1 author_defined_assembly 3 ? monomeric 1 author_defined_assembly 4 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,J 1 1 B,F,K 2 1 C,G,H,L 3 1 D,I,M 4 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id I _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C20 H40 O2' _chem_comp.formula_weight 312.53 _chem_comp.id DCR _chem_comp.mon_nstd_flag . _chem_comp.name 'icosanoic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 DCR sing 44 n n O1 HO1 DCR sing 45 n n C2 C1 DCR sing 46 n n O2 C1 DCR doub 47 n n C3 C2 DCR sing 48 n n C2 H2 DCR sing 49 n n C2 H2A DCR sing 50 n n C4 C3 DCR sing 51 n n C3 H3 DCR sing 52 n n C3 H3A DCR sing 53 n n C4 C5 DCR sing 54 n n C4 H4 DCR sing 55 n n C4 H4A DCR sing 56 n n C6 C5 DCR sing 57 n n C5 H5 DCR sing 58 n n C5 H5A DCR sing 59 n n C6 C7 DCR sing 60 n n C6 H6 DCR sing 61 n n C6 H6A DCR sing 62 n n C8 C7 DCR sing 63 n n C7 H7 DCR sing 64 n n C7 H7A DCR sing 65 n n C9 C8 DCR sing 66 n n C8 H8 DCR sing 67 n n C8 H8A DCR sing 68 n n C10 C9 DCR sing 69 n n C9 H9 DCR sing 70 n n C9 H9A DCR sing 71 n n C11 C10 DCR sing 72 n n C10 H10 DCR sing 73 n n C10 H10A DCR sing 74 n n C12 C11 DCR sing 75 n n C11 H11 DCR sing 76 n n C11 H11A DCR sing 77 n n C13 C12 DCR sing 78 n n C12 H12 DCR sing 79 n n C12 H12A DCR sing 80 n n C14 C13 DCR sing 81 n n C13 H13 DCR sing 82 n n C13 H13A DCR sing 83 n n C15 C14 DCR sing 84 n n C14 H14 DCR sing 85 n n C14 H14A DCR sing 86 n n C15 C16 DCR sing 87 n n C15 H15 DCR sing 88 n n C15 H15A DCR sing 89 n n C16 C17 DCR sing 90 n n C16 H16 DCR sing 91 n n C16 H16A DCR sing 92 n n C18 C17 DCR sing 93 n n C17 H17 DCR sing 94 n n C17 H17A DCR sing 95 n n C18 C19 DCR sing 96 n n C18 H18 DCR sing 97 n n C18 H18A DCR sing 98 n n C20 C19 DCR sing 99 n n C19 H19 DCR sing 100 n n C19 H19A DCR sing 101 n n C20 H20 DCR sing 102 n n C20 H20A DCR sing 103 n n C20 H20B DCR sing 104 n n # _atom_sites.entry_id 6V8L _atom_sites.fract_transf_matrix[1][1] 0.025054 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002891 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009044 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.015305 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 SO4 A 1 201 1 SO4 SO4 . F 2 SO4 B 1 201 4 SO4 SO4 . G 2 SO4 C 1 201 2 SO4 SO4 . H 2 SO4 C 1 202 3 SO4 SO4 . I 3 DCR D 1 201 201 DCR PLM . J 4 HOH A 1 301 188 HOH HOH . J 4 HOH A 2 302 264 HOH HOH . J 4 HOH A 3 303 183 HOH HOH . J 4 HOH A 4 304 175 HOH HOH . J 4 HOH A 5 305 13 HOH HOH . J 4 HOH A 6 306 62 HOH HOH . J 4 HOH A 7 307 14 HOH HOH . J 4 HOH A 8 308 266 HOH HOH . J 4 HOH A 9 309 237 HOH HOH . J 4 HOH A 10 310 136 HOH HOH . J 4 HOH A 11 311 67 HOH HOH . J 4 HOH A 12 312 63 HOH HOH . J 4 HOH A 13 313 66 HOH HOH . J 4 HOH A 14 314 15 HOH HOH . J 4 HOH A 15 315 12 HOH HOH . J 4 HOH A 16 316 137 HOH HOH . J 4 HOH A 17 317 186 HOH HOH . J 4 HOH A 18 318 65 HOH HOH . J 4 HOH A 19 319 53 HOH HOH . J 4 HOH A 20 320 234 HOH HOH . J 4 HOH A 21 321 256 HOH HOH . J 4 HOH A 22 322 259 HOH HOH . J 4 HOH A 23 323 184 HOH HOH . J 4 HOH A 24 324 139 HOH HOH . J 4 HOH A 25 325 238 HOH HOH . J 4 HOH A 26 326 138 HOH HOH . J 4 HOH A 27 327 165 HOH HOH . J 4 HOH A 28 328 11 HOH HOH . J 4 HOH A 29 329 133 HOH HOH . J 4 HOH A 30 330 182 HOH HOH . J 4 HOH A 31 331 179 HOH HOH . J 4 HOH A 32 332 142 HOH HOH . J 4 HOH A 33 333 68 HOH HOH . J 4 HOH A 34 334 268 HOH HOH . J 4 HOH A 35 335 64 HOH HOH . J 4 HOH A 36 336 185 HOH HOH . J 4 HOH A 37 337 236 HOH HOH . J 4 HOH A 38 338 180 HOH HOH . J 4 HOH A 39 339 181 HOH HOH . K 4 HOH B 1 301 267 HOH HOH . K 4 HOH B 2 302 21 HOH HOH . K 4 HOH B 3 303 143 HOH HOH . K 4 HOH B 4 304 246 HOH HOH . K 4 HOH B 5 305 71 HOH HOH . K 4 HOH B 6 306 89 HOH HOH . K 4 HOH B 7 307 3 HOH HOH . K 4 HOH B 8 308 80 HOH HOH . K 4 HOH B 9 309 148 HOH HOH . K 4 HOH B 10 310 69 HOH HOH . K 4 HOH B 11 311 85 HOH HOH . K 4 HOH B 12 312 81 HOH HOH . K 4 HOH B 13 313 18 HOH HOH . K 4 HOH B 14 314 86 HOH HOH . K 4 HOH B 15 315 20 HOH HOH . K 4 HOH B 16 316 178 HOH HOH . K 4 HOH B 17 317 17 HOH HOH . K 4 HOH B 18 318 96 HOH HOH . K 4 HOH B 19 319 87 HOH HOH . K 4 HOH B 20 320 146 HOH HOH . K 4 HOH B 21 321 197 HOH HOH . K 4 HOH B 22 322 83 HOH HOH . K 4 HOH B 23 323 190 HOH HOH . K 4 HOH B 24 324 198 HOH HOH . K 4 HOH B 25 325 91 HOH HOH . K 4 HOH B 26 326 82 HOH HOH . K 4 HOH B 27 327 7 HOH HOH . K 4 HOH B 28 328 70 HOH HOH . K 4 HOH B 29 329 73 HOH HOH . K 4 HOH B 30 330 16 HOH HOH . K 4 HOH B 31 331 202 HOH HOH . K 4 HOH B 32 332 144 HOH HOH . K 4 HOH B 33 333 201 HOH HOH . K 4 HOH B 34 334 191 HOH HOH . K 4 HOH B 35 335 269 HOH HOH . K 4 HOH B 36 336 84 HOH HOH . K 4 HOH B 37 337 90 HOH HOH . K 4 HOH B 38 338 192 HOH HOH . K 4 HOH B 39 339 203 HOH HOH . K 4 HOH B 40 340 149 HOH HOH . K 4 HOH B 41 341 205 HOH HOH . K 4 HOH B 42 342 218 HOH HOH . K 4 HOH B 43 343 193 HOH HOH . K 4 HOH B 44 344 204 HOH HOH . K 4 HOH B 45 345 88 HOH HOH . K 4 HOH B 46 346 253 HOH HOH . K 4 HOH B 47 347 194 HOH HOH . K 4 HOH B 48 348 245 HOH HOH . K 4 HOH B 49 349 195 HOH HOH . K 4 HOH B 50 350 254 HOH HOH . K 4 HOH B 51 351 189 HOH HOH . K 4 HOH B 52 352 60 HOH HOH . K 4 HOH B 53 353 196 HOH HOH . K 4 HOH B 54 354 247 HOH HOH . K 4 HOH B 55 355 72 HOH HOH . K 4 HOH B 56 356 270 HOH HOH . K 4 HOH B 57 357 199 HOH HOH . K 4 HOH B 58 358 177 HOH HOH . K 4 HOH B 59 359 130 HOH HOH . K 4 HOH B 60 360 275 HOH HOH . K 4 HOH B 61 361 131 HOH HOH . K 4 HOH B 62 362 206 HOH HOH . K 4 HOH B 63 363 176 HOH HOH . L 4 HOH C 1 301 263 HOH HOH . L 4 HOH C 2 302 164 HOH HOH . L 4 HOH C 3 303 153 HOH HOH . L 4 HOH C 4 304 98 HOH HOH . L 4 HOH C 5 305 59 HOH HOH . L 4 HOH C 6 306 56 HOH HOH . L 4 HOH C 7 307 28 HOH HOH . L 4 HOH C 8 308 25 HOH HOH . L 4 HOH C 9 309 30 HOH HOH . L 4 HOH C 10 310 215 HOH HOH . L 4 HOH C 11 311 97 HOH HOH . L 4 HOH C 12 312 19 HOH HOH . L 4 HOH C 13 313 2 HOH HOH . L 4 HOH C 14 314 58 HOH HOH . L 4 HOH C 15 315 217 HOH HOH . L 4 HOH C 16 316 103 HOH HOH . L 4 HOH C 17 317 220 HOH HOH . L 4 HOH C 18 318 105 HOH HOH . L 4 HOH C 19 319 8 HOH HOH . L 4 HOH C 20 320 29 HOH HOH . L 4 HOH C 21 321 26 HOH HOH . L 4 HOH C 22 322 102 HOH HOH . L 4 HOH C 23 323 107 HOH HOH . L 4 HOH C 24 324 214 HOH HOH . L 4 HOH C 25 325 150 HOH HOH . L 4 HOH C 26 326 45 HOH HOH . L 4 HOH C 27 327 151 HOH HOH . L 4 HOH C 28 328 154 HOH HOH . L 4 HOH C 29 329 54 HOH HOH . L 4 HOH C 30 330 248 HOH HOH . L 4 HOH C 31 331 52 HOH HOH . L 4 HOH C 32 332 55 HOH HOH . L 4 HOH C 33 333 211 HOH HOH . L 4 HOH C 34 334 257 HOH HOH . L 4 HOH C 35 335 104 HOH HOH . L 4 HOH C 36 336 249 HOH HOH . L 4 HOH C 37 337 207 HOH HOH . L 4 HOH C 38 338 242 HOH HOH . L 4 HOH C 39 339 174 HOH HOH . L 4 HOH C 40 340 57 HOH HOH . L 4 HOH C 41 341 170 HOH HOH . L 4 HOH C 42 342 271 HOH HOH . L 4 HOH C 43 343 258 HOH HOH . L 4 HOH C 44 344 210 HOH HOH . L 4 HOH C 45 345 169 HOH HOH . L 4 HOH C 46 346 22 HOH HOH . L 4 HOH C 47 347 212 HOH HOH . L 4 HOH C 48 348 208 HOH HOH . L 4 HOH C 49 349 134 HOH HOH . L 4 HOH C 50 350 24 HOH HOH . L 4 HOH C 51 351 209 HOH HOH . L 4 HOH C 52 352 99 HOH HOH . L 4 HOH C 53 353 43 HOH HOH . L 4 HOH C 54 354 240 HOH HOH . L 4 HOH C 55 355 135 HOH HOH . L 4 HOH C 56 356 51 HOH HOH . L 4 HOH C 57 357 129 HOH HOH . L 4 HOH C 58 358 233 HOH HOH . L 4 HOH C 59 359 27 HOH HOH . L 4 HOH C 60 360 221 HOH HOH . L 4 HOH C 61 361 155 HOH HOH . L 4 HOH C 62 362 100 HOH HOH . L 4 HOH C 63 363 106 HOH HOH . M 4 HOH D 1 301 265 HOH HOH . M 4 HOH D 2 302 228 HOH HOH . M 4 HOH D 3 303 172 HOH HOH . M 4 HOH D 4 304 37 HOH HOH . M 4 HOH D 5 305 42 HOH HOH . M 4 HOH D 6 306 114 HOH HOH . M 4 HOH D 7 307 230 HOH HOH . M 4 HOH D 8 308 159 HOH HOH . M 4 HOH D 9 309 9 HOH HOH . M 4 HOH D 10 310 171 HOH HOH . M 4 HOH D 11 311 123 HOH HOH . M 4 HOH D 12 312 145 HOH HOH . M 4 HOH D 13 313 251 HOH HOH . M 4 HOH D 14 314 157 HOH HOH . M 4 HOH D 15 315 225 HOH HOH . M 4 HOH D 16 316 109 HOH HOH . M 4 HOH D 17 317 166 HOH HOH . M 4 HOH D 18 318 5 HOH HOH . M 4 HOH D 19 319 116 HOH HOH . M 4 HOH D 20 320 6 HOH HOH . M 4 HOH D 21 321 31 HOH HOH . M 4 HOH D 22 322 163 HOH HOH . M 4 HOH D 23 323 36 HOH HOH . M 4 HOH D 24 324 120 HOH HOH . M 4 HOH D 25 325 113 HOH HOH . M 4 HOH D 26 326 10 HOH HOH . M 4 HOH D 27 327 1 HOH HOH . M 4 HOH D 28 328 41 HOH HOH . M 4 HOH D 29 329 124 HOH HOH . M 4 HOH D 30 330 160 HOH HOH . M 4 HOH D 31 331 274 HOH HOH . M 4 HOH D 32 332 115 HOH HOH . M 4 HOH D 33 333 161 HOH HOH . M 4 HOH D 34 334 122 HOH HOH . M 4 HOH D 35 335 78 HOH HOH . M 4 HOH D 36 336 252 HOH HOH . M 4 HOH D 37 337 74 HOH HOH . M 4 HOH D 38 338 110 HOH HOH . M 4 HOH D 39 339 101 HOH HOH . M 4 HOH D 40 340 95 HOH HOH . M 4 HOH D 41 341 4 HOH HOH . M 4 HOH D 42 342 32 HOH HOH . M 4 HOH D 43 343 119 HOH HOH . M 4 HOH D 44 344 222 HOH HOH . M 4 HOH D 45 345 34 HOH HOH . M 4 HOH D 46 346 76 HOH HOH . M 4 HOH D 47 347 121 HOH HOH . M 4 HOH D 48 348 46 HOH HOH . M 4 HOH D 49 349 33 HOH HOH . M 4 HOH D 50 350 39 HOH HOH . M 4 HOH D 51 351 244 HOH HOH . M 4 HOH D 52 352 92 HOH HOH . M 4 HOH D 53 353 35 HOH HOH . M 4 HOH D 54 354 125 HOH HOH . M 4 HOH D 55 355 132 HOH HOH . M 4 HOH D 56 356 38 HOH HOH . M 4 HOH D 57 357 273 HOH HOH . M 4 HOH D 58 358 108 HOH HOH . M 4 HOH D 59 359 44 HOH HOH . M 4 HOH D 60 360 112 HOH HOH . M 4 HOH D 61 361 127 HOH HOH . M 4 HOH D 62 362 226 HOH HOH . M 4 HOH D 63 363 158 HOH HOH . M 4 HOH D 64 364 40 HOH HOH . M 4 HOH D 65 365 231 HOH HOH . M 4 HOH D 66 366 260 HOH HOH . M 4 HOH D 67 367 111 HOH HOH . M 4 HOH D 68 368 168 HOH HOH . M 4 HOH D 69 369 156 HOH HOH . M 4 HOH D 70 370 262 HOH HOH . M 4 HOH D 71 371 162 HOH HOH . M 4 HOH D 72 372 47 HOH HOH . M 4 HOH D 73 373 261 HOH HOH . M 4 HOH D 74 374 79 HOH HOH . M 4 HOH D 75 375 241 HOH HOH . M 4 HOH D 76 376 272 HOH HOH . M 4 HOH D 77 377 255 HOH HOH . M 4 HOH D 78 378 187 HOH HOH . M 4 HOH D 79 379 243 HOH HOH . M 4 HOH D 80 380 128 HOH HOH . M 4 HOH D 81 381 239 HOH HOH . M 4 HOH D 82 382 235 HOH HOH . M 4 HOH D 83 383 167 HOH HOH . M 4 HOH D 84 384 224 HOH HOH . M 4 HOH D 85 385 250 HOH HOH . M 4 HOH D 86 386 227 HOH HOH . M 4 HOH D 87 387 93 HOH HOH . M 4 HOH D 88 388 75 HOH HOH . M 4 HOH D 89 389 223 HOH HOH . M 4 HOH D 90 390 77 HOH HOH . M 4 HOH D 91 391 232 HOH HOH . M 4 HOH D 92 392 213 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 DCR . . . I 3 1.167 52.713 56.506 0.5 45.49 ? O1 DCR 201 D 1 HETATM 2 C C1 DCR . . . I 3 1.779 52.992 55.441 0.5 41.76 ? C1 DCR 201 D 1 HETATM 3 O O2 DCR . . . I 3 1.717 54.121 54.911 0.5 43.48 ? O2 DCR 201 D 1 HETATM 4 C C2 DCR . . . I 3 2.625 51.922 54.795 0.5 40.42 ? C2 DCR 201 D 1 HETATM 5 C C3 DCR . . . I 3 2.966 52.207 53.331 0.5 38.84 ? C3 DCR 201 D 1 HETATM 6 C C4 DCR . . . I 3 3.883 51.1 52.786 0.5 39.86 ? C4 DCR 201 D 1 HETATM 7 C C5 DCR . . . I 3 4.464 51.449 51.407 0.5 37.88 ? C5 DCR 201 D 1 HETATM 8 C C6 DCR . . . I 3 5.64 50.569 50.972 0.5 39.49 ? C6 DCR 201 D 1 # _model_server_stats.io_time_ms 0 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 274 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 8 #