data_6V9C # _model_server_result.job_id fSfHgW9Z5YETctk8fkKVPw _model_server_result.datetime_utc '2024-12-22 11:42:54' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6v9c # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":801}' # _entry.id 6V9C # _exptl.entry_id 6V9C _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 520.365 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[(3R,4S)-4-{[6-(2,6-dichloro-3,5-dimethoxyphenyl)-8-methyl-7-oxo-7,8-dihydropyrido[2,3-d]pyrimidin-2-yl]amino}oxolan-3-yl]prop-2-enamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 97.57 _cell.angle_gamma 90 _cell.entry_id 6V9C _cell.length_a 44.067 _cell.length_b 58.67 _cell.length_c 60.747 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6V9C _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 104 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 552 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id CBG _struct_conn.ptnr2_label_comp_id QS7 _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id QS7 _struct_conn.ptnr2_auth_seq_id 801 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.861 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C23 H23 Cl2 N5 O5' _chem_comp.formula_weight 520.365 _chem_comp.id QS7 _chem_comp.mon_nstd_flag . _chem_comp.name N-[(3R,4S)-4-{[6-(2,6-dichloro-3,5-dimethoxyphenyl)-8-methyl-7-oxo-7,8-dihydropyrido[2,3-d]pyrimidin-2-yl]amino}oxolan-3-yl]prop-2-enamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag CAW OAT QS7 sing 277 n n OAT CAL QS7 sing 278 n n CAL CAP QS7 doub 279 n y CAL CAM QS7 sing 280 n y CAP CAO QS7 sing 281 n y CAV OAU QS7 sing 282 n n CLAR CAM QS7 sing 283 n n CAM CAK QS7 doub 284 n y CAO OAU QS7 sing 285 n n CAO CAN QS7 doub 286 n y CAK CAN QS7 sing 287 n y CAK CAI QS7 sing 288 n n CAN CLAS QS7 sing 289 n n OAQ CAH QS7 doub 290 n n CAI CAH QS7 sing 291 n n CAI CAJ QS7 doub 292 n n CAH NAG QS7 sing 293 n n CAJ C5 QS7 sing 294 n n NAG CBI QS7 sing 295 n n NAG C4 QS7 sing 296 n n C5 C4 QS7 sing 297 n y C5 C6 QS7 doub 298 n y C4 N3 QS7 doub 299 n y C6 N1 QS7 sing 300 n y N3 C2 QS7 sing 301 n y N1 C2 QS7 doub 302 n y C2 NAX QS7 sing 303 n n CAZ OBA QS7 sing 304 n n CAZ CAY QS7 sing 305 n n NAX CAY QS7 sing 306 n n OBA CBB QS7 sing 307 n n CAY CBC QS7 sing 308 n n CBB CBC QS7 sing 309 n n CBC NBD QS7 sing 310 n n NBD CBE QS7 sing 311 n n CBE OBH QS7 doub 312 n n CBE CBF QS7 sing 313 n n CBG CBF QS7 doub 314 n n C6 H1 QS7 sing 315 n n CAV H2 QS7 sing 316 n n CAV H3 QS7 sing 317 n n CAV H4 QS7 sing 318 n n CAP H5 QS7 sing 319 n n CAW H6 QS7 sing 320 n n CAW H7 QS7 sing 321 n n CAW H8 QS7 sing 322 n n CAJ H9 QS7 sing 323 n n CBI H10 QS7 sing 324 n n CBI H11 QS7 sing 325 n n CBI H12 QS7 sing 326 n n NAX H13 QS7 sing 327 n n CAY H14 QS7 sing 328 n n CAZ H15 QS7 sing 329 n n CAZ H16 QS7 sing 330 n n CBB H17 QS7 sing 331 n n CBB H18 QS7 sing 332 n n CBC H19 QS7 sing 333 n n NBD H20 QS7 sing 334 n n CBF H21 QS7 sing 335 n n CBG H23 QS7 sing 336 n n CBG H24 QS7 sing 337 n n # _atom_sites.entry_id 6V9C _atom_sites.fract_transf_matrix[1][1] 0.022693 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.003016 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017044 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.016606 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 QS7 A 1 801 1 QS7 DRG . C 3 SO4 A 1 802 6922 SO4 SO4 . D 3 SO4 A 1 803 6925 SO4 SO4 . E 4 HOH A 1 901 9 HOH HOH . E 4 HOH A 2 902 74 HOH HOH . E 4 HOH A 3 903 44 HOH HOH . E 4 HOH A 4 904 45 HOH HOH . E 4 HOH A 5 905 111 HOH HOH . E 4 HOH A 6 906 42 HOH HOH . E 4 HOH A 7 907 14 HOH HOH . E 4 HOH A 8 908 12 HOH HOH . E 4 HOH A 9 909 59 HOH HOH . E 4 HOH A 10 910 39 HOH HOH . E 4 HOH A 11 911 26 HOH HOH . E 4 HOH A 12 912 69 HOH HOH . E 4 HOH A 13 913 127 HOH HOH . E 4 HOH A 14 914 131 HOH HOH . E 4 HOH A 15 915 16 HOH HOH . E 4 HOH A 16 916 19 HOH HOH . E 4 HOH A 17 917 25 HOH HOH . E 4 HOH A 18 918 96 HOH HOH . E 4 HOH A 19 919 62 HOH HOH . E 4 HOH A 20 920 137 HOH HOH . E 4 HOH A 21 921 126 HOH HOH . E 4 HOH A 22 922 2 HOH HOH . E 4 HOH A 23 923 17 HOH HOH . E 4 HOH A 24 924 4 HOH HOH . E 4 HOH A 25 925 128 HOH HOH . E 4 HOH A 26 926 32 HOH HOH . E 4 HOH A 27 927 68 HOH HOH . E 4 HOH A 28 928 13 HOH HOH . E 4 HOH A 29 929 10 HOH HOH . E 4 HOH A 30 930 58 HOH HOH . E 4 HOH A 31 931 22 HOH HOH . E 4 HOH A 32 932 36 HOH HOH . E 4 HOH A 33 933 142 HOH HOH . E 4 HOH A 34 934 8 HOH HOH . E 4 HOH A 35 935 135 HOH HOH . E 4 HOH A 36 936 77 HOH HOH . E 4 HOH A 37 937 8 HOH HOH . E 4 HOH A 38 938 37 HOH HOH . E 4 HOH A 39 939 18 HOH HOH . E 4 HOH A 40 940 51 HOH HOH . E 4 HOH A 41 941 35 HOH HOH . E 4 HOH A 42 942 65 HOH HOH . E 4 HOH A 43 943 153 HOH HOH . E 4 HOH A 44 944 28 HOH HOH . E 4 HOH A 45 945 26 HOH HOH . E 4 HOH A 46 946 15 HOH HOH . E 4 HOH A 47 947 53 HOH HOH . E 4 HOH A 48 948 2 HOH HOH . E 4 HOH A 49 949 31 HOH HOH . E 4 HOH A 50 950 116 HOH HOH . E 4 HOH A 51 951 91 HOH HOH . E 4 HOH A 52 952 47 HOH HOH . E 4 HOH A 53 953 98 HOH HOH . E 4 HOH A 54 954 146 HOH HOH . E 4 HOH A 55 955 7 HOH HOH . E 4 HOH A 56 956 9 HOH HOH . E 4 HOH A 57 957 49 HOH HOH . E 4 HOH A 58 958 12 HOH HOH . E 4 HOH A 59 959 41 HOH HOH . E 4 HOH A 60 960 1 HOH HOH . E 4 HOH A 61 961 156 HOH HOH . E 4 HOH A 62 962 83 HOH HOH . E 4 HOH A 63 963 6 HOH HOH . E 4 HOH A 64 964 24 HOH HOH . E 4 HOH A 65 965 54 HOH HOH . E 4 HOH A 66 966 29 HOH HOH . E 4 HOH A 67 967 7 HOH HOH . E 4 HOH A 68 968 123 HOH HOH . E 4 HOH A 69 969 89 HOH HOH . E 4 HOH A 70 970 34 HOH HOH . E 4 HOH A 71 971 121 HOH HOH . E 4 HOH A 72 972 55 HOH HOH . E 4 HOH A 73 973 108 HOH HOH . E 4 HOH A 74 974 132 HOH HOH . E 4 HOH A 75 975 19 HOH HOH . E 4 HOH A 76 976 10 HOH HOH . E 4 HOH A 77 977 57 HOH HOH . E 4 HOH A 78 978 101 HOH HOH . E 4 HOH A 79 979 48 HOH HOH . E 4 HOH A 80 980 82 HOH HOH . E 4 HOH A 81 981 110 HOH HOH . E 4 HOH A 82 982 46 HOH HOH . E 4 HOH A 83 983 27 HOH HOH . E 4 HOH A 84 984 63 HOH HOH . E 4 HOH A 85 985 18 HOH HOH . E 4 HOH A 86 986 60 HOH HOH . E 4 HOH A 87 987 11 HOH HOH . E 4 HOH A 88 988 136 HOH HOH . E 4 HOH A 89 989 95 HOH HOH . E 4 HOH A 90 990 23 HOH HOH . E 4 HOH A 91 991 102 HOH HOH . E 4 HOH A 92 992 11 HOH HOH . E 4 HOH A 93 993 90 HOH HOH . E 4 HOH A 94 994 50 HOH HOH . E 4 HOH A 95 995 13 HOH HOH . E 4 HOH A 96 996 38 HOH HOH . E 4 HOH A 97 997 160 HOH HOH . E 4 HOH A 98 998 22 HOH HOH . E 4 HOH A 99 999 130 HOH HOH . E 4 HOH A 100 1000 5 HOH HOH . E 4 HOH A 101 1001 103 HOH HOH . E 4 HOH A 102 1002 143 HOH HOH . E 4 HOH A 103 1003 157 HOH HOH . E 4 HOH A 104 1004 14 HOH HOH . E 4 HOH A 105 1005 125 HOH HOH . E 4 HOH A 106 1006 6 HOH HOH . E 4 HOH A 107 1007 151 HOH HOH . E 4 HOH A 108 1008 25 HOH HOH . E 4 HOH A 109 1009 86 HOH HOH . E 4 HOH A 110 1010 32 HOH HOH . E 4 HOH A 111 1011 30 HOH HOH . E 4 HOH A 112 1012 56 HOH HOH . E 4 HOH A 113 1013 109 HOH HOH . E 4 HOH A 114 1014 81 HOH HOH . E 4 HOH A 115 1015 104 HOH HOH . E 4 HOH A 116 1016 15 HOH HOH . E 4 HOH A 117 1017 33 HOH HOH . E 4 HOH A 118 1018 3 HOH HOH . E 4 HOH A 119 1019 71 HOH HOH . E 4 HOH A 120 1020 24 HOH HOH . E 4 HOH A 121 1021 30 HOH HOH . E 4 HOH A 122 1022 20 HOH HOH . E 4 HOH A 123 1023 145 HOH HOH . E 4 HOH A 124 1024 78 HOH HOH . E 4 HOH A 125 1025 124 HOH HOH . E 4 HOH A 126 1026 43 HOH HOH . E 4 HOH A 127 1027 70 HOH HOH . E 4 HOH A 128 1028 52 HOH HOH . E 4 HOH A 129 1029 20 HOH HOH . E 4 HOH A 130 1030 23 HOH HOH . E 4 HOH A 131 1031 27 HOH HOH . E 4 HOH A 132 1032 144 HOH HOH . E 4 HOH A 133 1033 154 HOH HOH . E 4 HOH A 134 1034 28 HOH HOH . E 4 HOH A 135 1035 122 HOH HOH . E 4 HOH A 136 1036 4 HOH HOH . E 4 HOH A 137 1037 1 HOH HOH . E 4 HOH A 138 1038 133 HOH HOH . E 4 HOH A 139 1039 21 HOH HOH . E 4 HOH A 140 1040 92 HOH HOH . E 4 HOH A 141 1041 150 HOH HOH . E 4 HOH A 142 1042 113 HOH HOH . E 4 HOH A 143 1043 162 HOH HOH . E 4 HOH A 144 1044 88 HOH HOH . E 4 HOH A 145 1045 85 HOH HOH . E 4 HOH A 146 1046 87 HOH HOH . E 4 HOH A 147 1047 31 HOH HOH . E 4 HOH A 148 1048 72 HOH HOH . E 4 HOH A 149 1049 76 HOH HOH . E 4 HOH A 150 1050 97 HOH HOH . E 4 HOH A 151 1051 5 HOH HOH . E 4 HOH A 152 1052 141 HOH HOH . E 4 HOH A 153 1053 33 HOH HOH . E 4 HOH A 154 1054 138 HOH HOH . E 4 HOH A 155 1055 21 HOH HOH . E 4 HOH A 156 1056 64 HOH HOH . E 4 HOH A 157 1057 17 HOH HOH . E 4 HOH A 158 1058 129 HOH HOH . E 4 HOH A 159 1059 80 HOH HOH . E 4 HOH A 160 1060 139 HOH HOH . E 4 HOH A 161 1061 106 HOH HOH . E 4 HOH A 162 1062 100 HOH HOH . E 4 HOH A 163 1063 3 HOH HOH . E 4 HOH A 164 1064 16 HOH HOH . E 4 HOH A 165 1065 29 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 QS7 . . . B 2 13.74 -2.572 21.537 1 21.72 ? C4 QS7 801 A 1 HETATM 2 C C5 QS7 . . . B 2 14.906 -1.82 21.33 1 22.6 ? C5 QS7 801 A 1 HETATM 3 C C6 QS7 . . . B 2 15.163 -0.704 22.118 1 20.69 ? C6 QS7 801 A 1 HETATM 4 N N1 QS7 . . . B 2 14.205 -0.35 23.087 1 23.69 ? N1 QS7 801 A 1 HETATM 5 N N3 QS7 . . . B 2 12.894 -2.2 22.511 1 21.83 ? N3 QS7 801 A 1 HETATM 6 C CAV QS7 . . . B 2 20.166 -5.949 16.776 1 28.52 ? CAV QS7 801 A 1 HETATM 7 O OAU QS7 . . . B 2 19.1 -5.876 17.761 1 28.69 ? OAU QS7 801 A 1 HETATM 8 C CAO QS7 . . . B 2 18.249 -4.809 17.58 1 28.41 ? CAO QS7 801 A 1 HETATM 9 C CAN QS7 . . . B 2 17.282 -4.639 18.572 1 26.76 ? CAN QS7 801 A 1 HETATM 10 CL CLAS QS7 . . . B 2 17.27 -5.683 19.942 1 27.85 ? CLAS QS7 801 A 1 HETATM 11 C CAP QS7 . . . B 2 18.281 -3.964 16.463 1 25.42 ? CAP QS7 801 A 1 HETATM 12 C CAL QS7 . . . B 2 17.42 -2.864 16.399 1 30.5 ? CAL QS7 801 A 1 HETATM 13 O OAT QS7 . . . B 2 17.357 -1.934 15.378 1 32.46 ? OAT QS7 801 A 1 HETATM 14 C CAW QS7 . . . B 2 18.446 -1.853 14.45 1 32.84 ? CAW QS7 801 A 1 HETATM 15 C CAM QS7 . . . B 2 16.457 -2.698 17.384 1 29.63 ? CAM QS7 801 A 1 HETATM 16 CL CLAR QS7 . . . B 2 15.412 -1.362 17.201 1 31.05 ? CLAR QS7 801 A 1 HETATM 17 C CAK QS7 . . . B 2 16.389 -3.572 18.494 1 25.77 ? CAK QS7 801 A 1 HETATM 18 C CAI QS7 . . . B 2 15.493 -3.298 19.539 1 23.28 ? CAI QS7 801 A 1 HETATM 19 C CAJ QS7 . . . B 2 15.816 -2.219 20.362 1 22.75 ? CAJ QS7 801 A 1 HETATM 20 C CAH QS7 . . . B 2 14.299 -4.013 19.763 1 24.58 ? CAH QS7 801 A 1 HETATM 21 O OAQ QS7 . . . B 2 14.029 -5.012 19.093 1 27.38 ? OAQ QS7 801 A 1 HETATM 22 N NAG QS7 . . . B 2 13.451 -3.642 20.762 1 24.93 ? NAG QS7 801 A 1 HETATM 23 C CBI QS7 . . . B 2 12.19 -4.428 21.026 1 25.91 ? CBI QS7 801 A 1 HETATM 24 C C2 QS7 . . . B 2 13.108 -1.118 23.275 1 24.62 ? C2 QS7 801 A 1 HETATM 25 N NAX QS7 . . . B 2 12.202 -0.775 24.195 1 27.17 ? NAX QS7 801 A 1 HETATM 26 C CAY QS7 . . . B 2 11.187 -1.712 24.734 1 29.92 ? CAY QS7 801 A 1 HETATM 27 C CAZ QS7 . . . B 2 9.867 -1.537 24.013 1 31.55 ? CAZ QS7 801 A 1 HETATM 28 O OBA QS7 . . . B 2 9.393 -0.266 24.524 1 32.41 ? OBA QS7 801 A 1 HETATM 29 C CBB QS7 . . . B 2 9.782 -0.183 25.935 1 30.35 ? CBB QS7 801 A 1 HETATM 30 C CBC QS7 . . . B 2 10.808 -1.293 26.137 1 29.45 ? CBC QS7 801 A 1 HETATM 31 N NBD QS7 . . . B 2 12.016 -0.861 26.883 1 30.84 ? NBD QS7 801 A 1 HETATM 32 C CBE QS7 . . . B 2 12.4 -1.498 28.01 1 32.16 ? CBE QS7 801 A 1 HETATM 33 O OBH QS7 . . . B 2 11.743 -2.401 28.522 1 32.1 ? OBH QS7 801 A 1 HETATM 34 C CBF QS7 . . . B 2 13.722 -1.049 28.68 1 32.03 ? CBF QS7 801 A 1 HETATM 35 C CBG QS7 . . . B 2 14.639 -0.052 27.948 1 28.63 ? CBG QS7 801 A 1 # _model_server_stats.io_time_ms 74 _model_server_stats.parse_time_ms 30 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 223 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 35 #