data_6V9S # _model_server_result.job_id ksurYh8CMluG3bKBdc2R_Q _model_server_result.datetime_utc '2025-03-01 03:30:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6v9s # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1201}' # _entry.id 6V9S # _exptl.entry_id 6V9S _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 493 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '[(2S)-2-[(2S)-butan-2-yl]-4-(5-chloro-1,3-benzoxazol-2-yl)-1,4-diazepan-1-yl][5-methyl-2-(2H-1,2,3-triazol-2-yl)phenyl]methanone' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6V9S _cell.length_a 64.661 _cell.length_b 66.341 _cell.length_c 182.461 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6V9S _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 127 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 119 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 210 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 202 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.031 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C26 H29 Cl N6 O2' _chem_comp.formula_weight 493 _chem_comp.id JHC _chem_comp.mon_nstd_flag . _chem_comp.name '[(2S)-2-[(2S)-butan-2-yl]-4-(5-chloro-1,3-benzoxazol-2-yl)-1,4-diazepan-1-yl][5-methyl-2-(2H-1,2,3-triazol-2-yl)phenyl]methanone' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C6 C7 JHC sing 248 n n C6 N JHC sing 249 n n C7 C8 JHC sing 250 n n N5 C20 JHC sing 251 n y N5 C19 JHC doub 252 n y C21 C20 JHC doub 253 n y C21 C22 JHC sing 254 n y CL C22 JHC sing 255 n n C8 N1 JHC sing 256 n n C20 C25 JHC sing 257 n y N C19 JHC sing 258 n n N C5 JHC sing 259 n n C19 O1 JHC sing 260 n y C22 C23 JHC doub 261 n y O C9 JHC doub 262 n n N1 C9 JHC sing 263 n n N1 C4 JHC sing 264 n n C25 O1 JHC sing 265 n y C25 C24 JHC doub 266 n y C5 C4 JHC sing 267 n n C9 C10 JHC sing 268 n n C23 C24 JHC sing 269 n y C4 C2 JHC sing 270 n n C11 C10 JHC doub 271 n y C11 C12 JHC sing 272 n y C10 C16 JHC sing 273 n y C3 C2 JHC sing 274 n n C13 C12 JHC sing 275 n n C12 C14 JHC doub 276 n y C2 C1 JHC sing 277 n n N3 N2 JHC sing 278 n y N3 C17 JHC doub 279 n y C16 N2 JHC sing 280 n n C16 C15 JHC doub 281 n y C1 C JHC sing 282 n n N2 N4 JHC sing 283 n y C17 C18 JHC sing 284 n y C14 C15 JHC sing 285 n y N4 C18 JHC doub 286 n y C H1 JHC sing 287 n n C H2 JHC sing 288 n n C H3 JHC sing 289 n n C1 H4 JHC sing 290 n n C1 H5 JHC sing 291 n n C11 H6 JHC sing 292 n n C13 H7 JHC sing 293 n n C13 H8 JHC sing 294 n n C13 H9 JHC sing 295 n n C14 H10 JHC sing 296 n n C15 H11 JHC sing 297 n n C17 H12 JHC sing 298 n n C18 H13 JHC sing 299 n n C2 H14 JHC sing 300 n n C21 H15 JHC sing 301 n n C23 H16 JHC sing 302 n n C24 H17 JHC sing 303 n n C3 H18 JHC sing 304 n n C3 H19 JHC sing 305 n n C3 H20 JHC sing 306 n n C4 H21 JHC sing 307 n n C5 H22 JHC sing 308 n n C5 H23 JHC sing 309 n n C6 H24 JHC sing 310 n n C6 H25 JHC sing 311 n n C7 H26 JHC sing 312 n n C7 H27 JHC sing 313 n n C8 H28 JHC sing 314 n n C8 H29 JHC sing 315 n n # _atom_sites.entry_id 6V9S _atom_sites.fract_transf_matrix[1][1] 0.015465 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015074 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005481 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 JHC A 1 1201 1201 JHC JHC . C 3 CLR A 1 1202 1501 CLR CLR . D 4 OLA A 1 1203 1601 OLA OLA . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N JHC . . . B 2 -9.169 -1.02 -56.638 1 53.49 ? N JHC 1201 A 1 HETATM 2 C C JHC . . . B 2 -10.02 0.109 -51.187 1 52.83 ? C JHC 1201 A 1 HETATM 3 O O JHC . . . B 2 -7.501 3.052 -56.135 1 56.67 ? O JHC 1201 A 1 HETATM 4 C C1 JHC . . . B 2 -10.513 -0.307 -52.574 1 52.94 ? C1 JHC 1201 A 1 HETATM 5 C C10 JHC . . . B 2 -7.036 1.804 -54.307 1 56.89 ? C10 JHC 1201 A 1 HETATM 6 C C11 JHC . . . B 2 -5.963 0.974 -54.616 1 57.18 ? C11 JHC 1201 A 1 HETATM 7 C C12 JHC . . . B 2 -5.062 0.562 -53.642 1 57.87 ? C12 JHC 1201 A 1 HETATM 8 C C13 JHC . . . B 2 -4.004 -0.272 -53.979 1 57.98 ? C13 JHC 1201 A 1 HETATM 9 C C14 JHC . . . B 2 -5.224 0.989 -52.331 1 58.66 ? C14 JHC 1201 A 1 HETATM 10 C C15 JHC . . . B 2 -6.289 1.823 -52.013 1 58.61 ? C15 JHC 1201 A 1 HETATM 11 C C16 JHC . . . B 2 -7.198 2.244 -52.981 1 59.63 ? C16 JHC 1201 A 1 HETATM 12 C C17 JHC . . . B 2 -9.862 4.271 -52.41 1 59.84 ? C17 JHC 1201 A 1 HETATM 13 C C18 JHC . . . B 2 -9.359 4.147 -51.194 1 59.82 ? C18 JHC 1201 A 1 HETATM 14 C C19 JHC . . . B 2 -8.054 -1.743 -56.475 1 54.95 ? C19 JHC 1201 A 1 HETATM 15 C C2 JHC . . . B 2 -10.246 0.833 -53.561 1 52.91 ? C2 JHC 1201 A 1 HETATM 16 C C20 JHC . . . B 2 -6.192 -2.769 -56.79 1 56.57 ? C20 JHC 1201 A 1 HETATM 17 C C21 JHC . . . B 2 -5.065 -3.331 -57.24 1 55.79 ? C21 JHC 1201 A 1 HETATM 18 C C22 JHC . . . B 2 -4.233 -4.041 -56.376 1 56.16 ? C22 JHC 1201 A 1 HETATM 19 C C23 JHC . . . B 2 -4.59 -4.158 -55.043 1 54.52 ? C23 JHC 1201 A 1 HETATM 20 C C24 JHC . . . B 2 -5.769 -3.554 -54.635 1 55.41 ? C24 JHC 1201 A 1 HETATM 21 C C25 JHC . . . B 2 -6.532 -2.884 -55.501 1 53.78 ? C25 JHC 1201 A 1 HETATM 22 C C3 JHC . . . B 2 -11.555 1.321 -54.175 1 52.56 ? C3 JHC 1201 A 1 HETATM 23 C C4 JHC . . . B 2 -9.33 0.351 -54.687 1 53.24 ? C4 JHC 1201 A 1 HETATM 24 C C5 JHC . . . B 2 -9.989 -0.798 -55.44 1 53.33 ? C5 JHC 1201 A 1 HETATM 25 C C6 JHC . . . B 2 -9.467 -0.372 -57.92 1 53.08 ? C6 JHC 1201 A 1 HETATM 26 C C7 JHC . . . B 2 -10.414 0.788 -57.624 1 52.55 ? C7 JHC 1201 A 1 HETATM 27 C C8 JHC . . . B 2 -9.721 1.904 -56.834 1 53.11 ? C8 JHC 1201 A 1 HETATM 28 C C9 JHC . . . B 2 -7.863 2.153 -55.377 1 56.06 ? C9 JHC 1201 A 1 HETATM 29 N N1 JHC . . . B 2 -8.982 1.454 -55.622 1 53.84 ? N1 JHC 1201 A 1 HETATM 30 N N2 JHC . . . B 2 -8.181 3.04 -52.549 1 56.52 ? N2 JHC 1201 A 1 HETATM 31 N N3 JHC . . . B 2 -9.073 3.552 -53.204 1 59.85 ? N3 JHC 1201 A 1 HETATM 32 N N4 JHC . . . B 2 -8.301 3.36 -51.342 1 59.88 ? N4 JHC 1201 A 1 HETATM 33 N N5 JHC . . . B 2 -7.144 -2.051 -57.398 1 56.4 ? N5 JHC 1201 A 1 HETATM 34 O O1 JHC . . . B 2 -7.706 -2.227 -55.322 1 56.34 ? O1 JHC 1201 A 1 HETATM 35 CL CL JHC . . . B 2 -2.762 -4.782 -56.935 1 56.98 ? CL JHC 1201 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 273 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 35 #