data_6V9V
#
_model_server_result.job_id            CCyKeapjJT5SYlAAFtrCxA 
_model_server_result.datetime_utc      '2024-11-22 22:24:01' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6v9v 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"I","auth_seq_id":1201}' 
#
_entry.id    6V9V 
#
_exptl.entry_id    6V9V 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              292.112 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            ~{N}-[[2,2-bis(fluoranyl)-10,12-dimethyl-1,3-diaza-2$l^{4}-boratricyclo[7.3.0.0^{3,7}]dodeca-4,6,9,11-tetraen-4-yl]methyl]ethanamide 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6V9V 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6V9V 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    tetrameric 
_pdbx_struct_assembly.oligomeric_count      4 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 G N N 
? 2 I N N 
? 2 K N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A SG CYS 621 A CYS 621 1_555 E C17 QT4 . A QT4 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.802 ? 
covale ? covale2 B SG CYS 621 B CYS 621 1_555 G C17 QT4 . B QT4 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.802 ? 
covale ? covale3 C SG CYS 621 D CYS 621 1_555 I C17 QT4 . D QT4 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.803 ? 
covale ? covale4 D SG CYS 621 C CYS 621 1_555 K C17 QT4 . C QT4 1201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.801 ? 
metalc ? metalc1 A OE2 GLU 788 A GLU 788 1_555 F CA CA . A CA 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.077 ? 
metalc ? metalc2 A OE1 GLN 791 A GLN 791 1_555 F CA CA . A CA 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.511 ? 
metalc ? metalc3 A OD1 ASN 805 A ASN 805 1_555 F CA CA . A CA 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.615 ? 
metalc ? metalc4 A OE1 GLU 808 A GLU 808 1_555 F CA CA . A CA 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.525 ? 
metalc ? metalc5 A OE2 GLU 808 A GLU 808 1_555 F CA CA . A CA 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.692 ? 
metalc ? metalc6 B OE2 GLU 788 B GLU 788 1_555 H CA CA . B CA 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.134 ? 
metalc ? metalc7 B OE1 GLN 791 B GLN 791 1_555 H CA CA . B CA 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.513 ? 
metalc ? metalc8 B OD1 ASN 805 B ASN 805 1_555 H CA CA . B CA 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.547 ? 
metalc ? metalc9 B OE1 GLU 808 B GLU 808 1_555 H CA CA . B CA 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.54 ? 
metalc ? metalc10 B OE2 GLU 808 B GLU 808 1_555 H CA CA . B CA 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.745 ? 
metalc ? metalc11 C OE2 GLU 788 D GLU 788 1_555 J CA CA . D CA 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.147 ? 
metalc ? metalc12 C OE1 GLN 791 D GLN 791 1_555 J CA CA . D CA 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.508 ? 
metalc ? metalc13 C OD1 ASN 805 D ASN 805 1_555 J CA CA . D CA 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.542 ? 
metalc ? metalc14 C OE1 GLU 808 D GLU 808 1_555 J CA CA . D CA 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.557 ? 
metalc ? metalc15 C OE2 GLU 808 D GLU 808 1_555 J CA CA . D CA 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.761 ? 
metalc ? metalc16 D OE2 GLU 788 C GLU 788 1_555 L CA CA . C CA 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.143 ? 
metalc ? metalc17 D OE1 GLN 791 C GLN 791 1_555 L CA CA . C CA 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.52 ? 
metalc ? metalc18 D OD1 ASN 805 C ASN 805 1_555 L CA CA . C CA 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.54 ? 
metalc ? metalc19 D OE1 GLU 808 C GLU 808 1_555 L CA CA . C CA 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.54 ? 
metalc ? metalc20 D OE2 GLU 808 C GLU 808 1_555 L CA CA . C CA 1202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.745 ? 
#
_chem_comp.formula           'C14 H17 B F2 N3 O' 
_chem_comp.formula_weight    292.112 
_chem_comp.id                QT4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              ~{N}-[[2,2-bis(fluoranyl)-10,12-dimethyl-1,3-diaza-2$l^{4}-boratricyclo[7.3.0.0^{3,7}]dodeca-4,6,9,11-tetraen-4-yl]methyl]ethanamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O16 C15 QT4 doub 275 n n 
N14 C15 QT4 sing 276 n n 
N14 C13 QT4 sing 277 n n 
C15 C17 QT4 sing 278 n n 
C25 C26 QT4 sing 279 n y 
C25 C12 QT4 doub 280 n y 
C13 C12 QT4 sing 281 n n 
C26 C10 QT4 doub 282 n y 
C12 N11 QT4 sing 283 n y 
F28 B01 QT4 sing 284 n n 
C10 N11 QT4 sing 285 n y 
C10 C09 QT4 sing 286 n n 
N11 B01 QT4 sing 287 n n 
C09 C03 QT4 sing 288 n n 
B01 N02 QT4 sing 289 n n 
B01 F27 QT4 sing 290 n n 
C03 N02 QT4 sing 291 n y 
C03 C04 QT4 doub 292 n y 
N02 C07 QT4 sing 293 n y 
C07 C08 QT4 sing 294 n n 
C07 C06 QT4 doub 295 n y 
C04 C05 QT4 sing 296 n n 
C04 C06 QT4 sing 297 n y 
C05 H1 QT4 sing 298 n n 
C05 H2 QT4 sing 299 n n 
C05 H3 QT4 sing 300 n n 
C06 H4 QT4 sing 301 n n 
C08 H5 QT4 sing 302 n n 
C08 H6 QT4 sing 303 n n 
C08 H7 QT4 sing 304 n n 
C09 H8 QT4 sing 305 n n 
C09 H9 QT4 sing 306 n n 
C13 H10 QT4 sing 307 n n 
C13 H11 QT4 sing 308 n n 
C17 H12 QT4 sing 309 n n 
C17 H13 QT4 sing 310 n n 
C17 H14 QT4 sing 311 n n 
C25 H15 QT4 sing 312 n n 
C26 H16 QT4 sing 313 n n 
N14 H17 QT4 sing 314 n n 
#
_atom_sites.entry_id                     6V9V 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 QT4 A 1 1201 621 QT4 CBI . 
F 3 CA A 1 1202 1 CA CA . 
G 2 QT4 B 1 1201 621 QT4 CBI . 
H 3 CA B 1 1202 2 CA CA . 
I 2 QT4 D 1 1201 621 QT4 CBI . 
J 3 CA D 1 1202 4 CA CA . 
K 2 QT4 C 1 1201 621 QT4 CBI . 
L 3 CA C 1 1202 3 CA CA . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 QT4 . . . I 2 194.007 168.093 159.562 1 113.24 ? C10 QT4 1201 D 1 
HETATM 2 B B01 QT4 . . . I 2 193.053 170.252 160.273 1 113.24 ? B01 QT4 1201 D 1 
HETATM 3 C C03 QT4 . . . I 2 195.347 169.686 160.934 1 113.24 ? C03 QT4 1201 D 1 
HETATM 4 C C04 QT4 . . . I 2 196.417 170.22 161.659 1 113.24 ? C04 QT4 1201 D 1 
HETATM 5 C C05 QT4 . . . I 2 197.775 169.565 161.882 1 113.24 ? C05 QT4 1201 D 1 
HETATM 6 C C06 QT4 . . . I 2 195.991 171.458 162.126 1 113.24 ? C06 QT4 1201 D 1 
HETATM 7 C C07 QT4 . . . I 2 194.691 171.622 161.67 1 113.24 ? C07 QT4 1201 D 1 
HETATM 8 C C08 QT4 . . . I 2 193.812 172.84 161.938 1 113.24 ? C08 QT4 1201 D 1 
HETATM 9 C C09 QT4 . . . I 2 195.241 168.424 160.236 1 113.24 ? C09 QT4 1201 D 1 
HETATM 10 C C12 QT4 . . . I 2 191.974 168.423 158.891 1 113.24 ? C12 QT4 1201 D 1 
HETATM 11 C C13 QT4 . . . I 2 190.627 169.09 158.673 1 113.24 ? C13 QT4 1201 D 1 
HETATM 12 C C15 QT4 . . . I 2 188.979 167.27 158.276 1 113.24 ? C15 QT4 1201 D 1 
HETATM 13 C C17 QT4 . . . I 2 188.797 167.126 159.783 1 113.24 ? C17 QT4 1201 D 1 
HETATM 14 C C25 QT4 . . . I 2 192.34 167.175 158.41 1 113.24 ? C25 QT4 1201 D 1 
HETATM 15 C C26 QT4 . . . I 2 193.644 166.954 158.833 1 113.24 ? C26 QT4 1201 D 1 
HETATM 16 F F27 QT4 . . . I 2 191.872 170.236 161.449 1 113.24 ? F27 QT4 1201 D 1 
HETATM 17 F F28 QT4 . . . I 2 192.832 171.43 159.118 1 113.24 ? F28 QT4 1201 D 1 
HETATM 18 N N02 QT4 . . . I 2 194.348 170.539 160.962 1 113.24 ? N02 QT4 1201 D 1 
HETATM 19 N N11 QT4 . . . I 2 192.994 168.931 159.573 1 113.24 ? N11 QT4 1201 D 1 
HETATM 20 N N14 QT4 . . . I 2 189.893 168.259 157.749 1 113.24 ? N14 QT4 1201 D 1 
HETATM 21 O O16 QT4 . . . I 2 188.373 166.573 157.541 1 113.24 ? O16 QT4 1201 D 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           8 
_model_server_stats.create_model_time_ms    35 
_model_server_stats.query_time_ms           271 
_model_server_stats.encode_time_ms          9 
_model_server_stats.element_count           21 
#