data_6VB4 # _model_server_result.job_id 9Ws8U_YhHNVvb_RrAY9Z7g _model_server_result.datetime_utc '2024-11-04 23:05:56' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6vb4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":101}' # _entry.id 6VB4 # _exptl.entry_id 6VB4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 59.044 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'ACETATE ION' _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6VB4 _cell.length_a 51.359 _cell.length_b 81.572 _cell.length_c 111.072 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6VB4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 D N N ? 4 F N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf ? disulf1 A SG CYS 101 A CYS 101 1_555 A SG CYS 164 A CYS 164 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.036 ? disulf ? disulf2 A SG CYS 203 A CYS 203 1_555 A SG CYS 259 A CYS 259 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.003 ? disulf ? disulf3 B SG CYS 26 B CYS 25 1_555 B SG CYS 81 B CYS 80 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.017 ? # _chem_comp.formula 'C2 H3 O2 -1' _chem_comp.formula_weight 59.044 _chem_comp.id ACT _chem_comp.mon_nstd_flag . _chem_comp.name 'ACETATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C O ACT doub 1 n n C OXT ACT sing 2 n n C CH3 ACT sing 3 n n CH3 H1 ACT sing 4 n n CH3 H2 ACT sing 5 n n CH3 H3 ACT sing 6 n n # _atom_sites.entry_id 6VB4 _atom_sites.fract_transf_matrix[1][1] 0.019471 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.012259 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009003 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 ACT A 1 301 1 ACT ACT . E 5 EDO A 1 302 1 EDO EDO . F 4 ACT B 1 101 2 ACT ACT . G 6 HOH A 1 401 62 HOH HOH . G 6 HOH A 2 402 138 HOH HOH . G 6 HOH A 3 403 187 HOH HOH . G 6 HOH A 4 404 192 HOH HOH . G 6 HOH A 5 405 30 HOH HOH . G 6 HOH A 6 406 98 HOH HOH . G 6 HOH A 7 407 77 HOH HOH . G 6 HOH A 8 408 228 HOH HOH . G 6 HOH A 9 409 210 HOH HOH . G 6 HOH A 10 410 99 HOH HOH . G 6 HOH A 11 411 9 HOH HOH . G 6 HOH A 12 412 2 HOH HOH . G 6 HOH A 13 413 43 HOH HOH . G 6 HOH A 14 414 155 HOH HOH . G 6 HOH A 15 415 193 HOH HOH . G 6 HOH A 16 416 92 HOH HOH . G 6 HOH A 17 417 255 HOH HOH . G 6 HOH A 18 418 36 HOH HOH . G 6 HOH A 19 419 67 HOH HOH . G 6 HOH A 20 420 166 HOH HOH . G 6 HOH A 21 421 101 HOH HOH . G 6 HOH A 22 422 233 HOH HOH . G 6 HOH A 23 423 50 HOH HOH . G 6 HOH A 24 424 124 HOH HOH . G 6 HOH A 25 425 59 HOH HOH . G 6 HOH A 26 426 37 HOH HOH . G 6 HOH A 27 427 206 HOH HOH . G 6 HOH A 28 428 182 HOH HOH . G 6 HOH A 29 429 208 HOH HOH . G 6 HOH A 30 430 4 HOH HOH . G 6 HOH A 31 431 26 HOH HOH . G 6 HOH A 32 432 71 HOH HOH . G 6 HOH A 33 433 136 HOH HOH . G 6 HOH A 34 434 65 HOH HOH . G 6 HOH A 35 435 181 HOH HOH . G 6 HOH A 36 436 23 HOH HOH . G 6 HOH A 37 437 257 HOH HOH . G 6 HOH A 38 438 48 HOH HOH . G 6 HOH A 39 439 15 HOH HOH . G 6 HOH A 40 440 19 HOH HOH . G 6 HOH A 41 441 120 HOH HOH . G 6 HOH A 42 442 56 HOH HOH . G 6 HOH A 43 443 52 HOH HOH . G 6 HOH A 44 444 3 HOH HOH . G 6 HOH A 45 445 258 HOH HOH . G 6 HOH A 46 446 96 HOH HOH . G 6 HOH A 47 447 171 HOH HOH . G 6 HOH A 48 448 144 HOH HOH . G 6 HOH A 49 449 119 HOH HOH . G 6 HOH A 50 450 53 HOH HOH . G 6 HOH A 51 451 259 HOH HOH . G 6 HOH A 52 452 100 HOH HOH . G 6 HOH A 53 453 28 HOH HOH . G 6 HOH A 54 454 85 HOH HOH . G 6 HOH A 55 455 121 HOH HOH . G 6 HOH A 56 456 33 HOH HOH . G 6 HOH A 57 457 10 HOH HOH . G 6 HOH A 58 458 40 HOH HOH . G 6 HOH A 59 459 170 HOH HOH . G 6 HOH A 60 460 125 HOH HOH . G 6 HOH A 61 461 6 HOH HOH . G 6 HOH A 62 462 14 HOH HOH . G 6 HOH A 63 463 211 HOH HOH . G 6 HOH A 64 464 128 HOH HOH . G 6 HOH A 65 465 132 HOH HOH . G 6 HOH A 66 466 185 HOH HOH . G 6 HOH A 67 467 25 HOH HOH . G 6 HOH A 68 468 61 HOH HOH . G 6 HOH A 69 469 13 HOH HOH . G 6 HOH A 70 470 114 HOH HOH . G 6 HOH A 71 471 16 HOH HOH . G 6 HOH A 72 472 139 HOH HOH . G 6 HOH A 73 473 12 HOH HOH . G 6 HOH A 74 474 146 HOH HOH . G 6 HOH A 75 475 247 HOH HOH . G 6 HOH A 76 476 1 HOH HOH . G 6 HOH A 77 477 196 HOH HOH . G 6 HOH A 78 478 105 HOH HOH . G 6 HOH A 79 479 5 HOH HOH . G 6 HOH A 80 480 64 HOH HOH . G 6 HOH A 81 481 11 HOH HOH . G 6 HOH A 82 482 165 HOH HOH . G 6 HOH A 83 483 103 HOH HOH . G 6 HOH A 84 484 143 HOH HOH . G 6 HOH A 85 485 252 HOH HOH . G 6 HOH A 86 486 21 HOH HOH . G 6 HOH A 87 487 83 HOH HOH . G 6 HOH A 88 488 232 HOH HOH . G 6 HOH A 89 489 195 HOH HOH . G 6 HOH A 90 490 80 HOH HOH . G 6 HOH A 91 491 115 HOH HOH . G 6 HOH A 92 492 149 HOH HOH . G 6 HOH A 93 493 137 HOH HOH . G 6 HOH A 94 494 238 HOH HOH . G 6 HOH A 95 495 133 HOH HOH . G 6 HOH A 96 496 104 HOH HOH . G 6 HOH A 97 497 55 HOH HOH . G 6 HOH A 98 498 20 HOH HOH . G 6 HOH A 99 499 123 HOH HOH . G 6 HOH A 100 500 186 HOH HOH . G 6 HOH A 101 501 72 HOH HOH . G 6 HOH A 102 502 240 HOH HOH . G 6 HOH A 103 503 35 HOH HOH . G 6 HOH A 104 504 254 HOH HOH . G 6 HOH A 105 505 111 HOH HOH . G 6 HOH A 106 506 38 HOH HOH . G 6 HOH A 107 507 194 HOH HOH . G 6 HOH A 108 508 57 HOH HOH . G 6 HOH A 109 509 169 HOH HOH . G 6 HOH A 110 510 32 HOH HOH . G 6 HOH A 111 511 110 HOH HOH . G 6 HOH A 112 512 198 HOH HOH . G 6 HOH A 113 513 75 HOH HOH . G 6 HOH A 114 514 51 HOH HOH . G 6 HOH A 115 515 27 HOH HOH . G 6 HOH A 116 516 168 HOH HOH . G 6 HOH A 117 517 142 HOH HOH . G 6 HOH A 118 518 261 HOH HOH . G 6 HOH A 119 519 231 HOH HOH . G 6 HOH A 120 520 68 HOH HOH . G 6 HOH A 121 521 82 HOH HOH . G 6 HOH A 122 522 140 HOH HOH . G 6 HOH A 123 523 44 HOH HOH . G 6 HOH A 124 524 129 HOH HOH . G 6 HOH A 125 525 81 HOH HOH . G 6 HOH A 126 526 227 HOH HOH . G 6 HOH A 127 527 109 HOH HOH . G 6 HOH A 128 528 157 HOH HOH . G 6 HOH A 129 529 45 HOH HOH . G 6 HOH A 130 530 241 HOH HOH . G 6 HOH A 131 531 117 HOH HOH . G 6 HOH A 132 532 256 HOH HOH . G 6 HOH A 133 533 153 HOH HOH . G 6 HOH A 134 534 63 HOH HOH . G 6 HOH A 135 535 126 HOH HOH . G 6 HOH A 136 536 244 HOH HOH . G 6 HOH A 137 537 69 HOH HOH . G 6 HOH A 138 538 226 HOH HOH . G 6 HOH A 139 539 200 HOH HOH . G 6 HOH A 140 540 205 HOH HOH . G 6 HOH A 141 541 145 HOH HOH . G 6 HOH A 142 542 141 HOH HOH . G 6 HOH A 143 543 39 HOH HOH . G 6 HOH A 144 544 215 HOH HOH . G 6 HOH A 145 545 118 HOH HOH . G 6 HOH A 146 546 94 HOH HOH . G 6 HOH A 147 547 214 HOH HOH . G 6 HOH A 148 548 152 HOH HOH . G 6 HOH A 149 549 163 HOH HOH . G 6 HOH A 150 550 245 HOH HOH . G 6 HOH A 151 551 58 HOH HOH . G 6 HOH A 152 552 217 HOH HOH . G 6 HOH A 153 553 250 HOH HOH . G 6 HOH A 154 554 202 HOH HOH . G 6 HOH A 155 555 160 HOH HOH . G 6 HOH A 156 556 122 HOH HOH . G 6 HOH A 157 557 134 HOH HOH . G 6 HOH A 158 558 199 HOH HOH . G 6 HOH A 159 559 212 HOH HOH . G 6 HOH A 160 560 183 HOH HOH . G 6 HOH A 161 561 176 HOH HOH . G 6 HOH A 162 562 251 HOH HOH . G 6 HOH A 163 563 154 HOH HOH . G 6 HOH A 164 564 135 HOH HOH . G 6 HOH A 165 565 131 HOH HOH . G 6 HOH A 166 566 167 HOH HOH . G 6 HOH A 167 567 73 HOH HOH . G 6 HOH A 168 568 91 HOH HOH . G 6 HOH A 169 569 248 HOH HOH . G 6 HOH A 170 570 102 HOH HOH . G 6 HOH A 171 571 54 HOH HOH . G 6 HOH A 172 572 93 HOH HOH . G 6 HOH A 173 573 201 HOH HOH . G 6 HOH A 174 574 164 HOH HOH . G 6 HOH A 175 575 79 HOH HOH . G 6 HOH A 176 576 90 HOH HOH . G 6 HOH A 177 577 218 HOH HOH . G 6 HOH A 178 578 220 HOH HOH . G 6 HOH A 179 579 219 HOH HOH . G 6 HOH A 180 580 222 HOH HOH . G 6 HOH A 181 581 239 HOH HOH . G 6 HOH A 182 582 130 HOH HOH . H 6 HOH B 1 201 260 HOH HOH . H 6 HOH B 2 202 174 HOH HOH . H 6 HOH B 3 203 34 HOH HOH . H 6 HOH B 4 204 17 HOH HOH . H 6 HOH B 5 205 162 HOH HOH . H 6 HOH B 6 206 31 HOH HOH . H 6 HOH B 7 207 60 HOH HOH . H 6 HOH B 8 208 188 HOH HOH . H 6 HOH B 9 209 66 HOH HOH . H 6 HOH B 10 210 70 HOH HOH . H 6 HOH B 11 211 78 HOH HOH . H 6 HOH B 12 212 49 HOH HOH . H 6 HOH B 13 213 113 HOH HOH . H 6 HOH B 14 214 242 HOH HOH . H 6 HOH B 15 215 175 HOH HOH . H 6 HOH B 16 216 76 HOH HOH . H 6 HOH B 17 217 74 HOH HOH . H 6 HOH B 18 218 112 HOH HOH . H 6 HOH B 19 219 223 HOH HOH . H 6 HOH B 20 220 197 HOH HOH . H 6 HOH B 21 221 29 HOH HOH . H 6 HOH B 22 222 150 HOH HOH . H 6 HOH B 23 223 147 HOH HOH . H 6 HOH B 24 224 189 HOH HOH . H 6 HOH B 25 225 84 HOH HOH . H 6 HOH B 26 226 224 HOH HOH . H 6 HOH B 27 227 46 HOH HOH . H 6 HOH B 28 228 107 HOH HOH . H 6 HOH B 29 229 209 HOH HOH . H 6 HOH B 30 230 116 HOH HOH . H 6 HOH B 31 231 203 HOH HOH . H 6 HOH B 32 232 243 HOH HOH . H 6 HOH B 33 233 236 HOH HOH . H 6 HOH B 34 234 204 HOH HOH . H 6 HOH B 35 235 180 HOH HOH . H 6 HOH B 36 236 207 HOH HOH . H 6 HOH B 37 237 161 HOH HOH . H 6 HOH B 38 238 159 HOH HOH . H 6 HOH B 39 239 237 HOH HOH . H 6 HOH B 40 240 216 HOH HOH . H 6 HOH B 41 241 151 HOH HOH . H 6 HOH B 42 242 47 HOH HOH . H 6 HOH B 43 243 230 HOH HOH . H 6 HOH B 44 244 249 HOH HOH . H 6 HOH B 45 245 235 HOH HOH . H 6 HOH B 46 246 88 HOH HOH . H 6 HOH B 47 247 229 HOH HOH . H 6 HOH B 48 248 148 HOH HOH . H 6 HOH B 49 249 221 HOH HOH . H 6 HOH B 50 250 234 HOH HOH . H 6 HOH B 51 251 184 HOH HOH . H 6 HOH B 52 252 246 HOH HOH . I 6 HOH C 1 101 42 HOH HOH . I 6 HOH C 2 102 41 HOH HOH . I 6 HOH C 3 103 7 HOH HOH . I 6 HOH C 4 104 8 HOH HOH . I 6 HOH C 5 105 97 HOH HOH . I 6 HOH C 6 106 106 HOH HOH . I 6 HOH C 7 107 87 HOH HOH . I 6 HOH C 8 108 95 HOH HOH . I 6 HOH C 9 109 172 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C ACT . . . F 4 2.254 37.201 0.003 1 54.35 ? C ACT 101 B 1 HETATM 2 O O ACT . . . F 4 1.148 36.849 -0.476 1 59.1 ? O ACT 101 B 1 HETATM 3 O OXT ACT . . . F 4 2.641 38.381 -0.189 1 64.93 ? OXT ACT 101 B 1 HETATM 4 C CH3 ACT . . . F 4 3.102 36.211 0.803 1 37.28 ? CH3 ACT 101 B 1 # _model_server_stats.io_time_ms 48 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 4 #