data_6VBI # _model_server_result.job_id yQVVnVI1zJYTY9hj6himig _model_server_result.datetime_utc '2024-12-21 14:45:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6vbi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":901}' # _entry.id 6VBI # _exptl.entry_id 6VBI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 363.41 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description "(13bS)-4,9-dimethoxy-14-methyl-8,13,13b,14-tetrahydroindolo[2',3':3,4]pyrido[2,1-b]quinazolin-5(7H)-one" _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6VBI _cell.length_a 65.975 _cell.length_b 85.519 _cell.length_c 124.381 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6VBI _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall 'P 2ac 2ab' _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 143 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 677 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 143 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 677 _struct_conn.ptnr2_symmetry 4_557 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.082 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C21 H21 N3 O3' _chem_comp.formula_weight 363.41 _chem_comp.id FZA _chem_comp.mon_nstd_flag . _chem_comp.name "(13bS)-4,9-dimethoxy-14-methyl-8,13,13b,14-tetrahydroindolo[2',3':3,4]pyrido[2,1-b]quinazolin-5(7H)-one" _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O24 C25 FZA sing 83 n n O24 C6 FZA sing 84 n n O11 C10 FZA doub 85 n n C15 C16 FZA sing 86 n n C15 C14 FZA sing 87 n n C6 C1 FZA doub 88 n y C6 C5 FZA sing 89 n y C10 N9 FZA sing 90 n n C10 C5 FZA sing 91 n n C16 N9 FZA sing 92 n n C1 C2 FZA sing 93 n y N9 C8 FZA sing 94 n n C5 C4 FZA doub 95 n y C28 O27 FZA sing 96 n n C2 C3 FZA doub 97 n y O27 C23 FZA sing 98 n n C4 N7 FZA sing 99 n n C4 C3 FZA sing 100 n y C14 C12 FZA doub 101 n y C14 C19 FZA sing 102 n y N7 C8 FZA sing 103 n n N7 C26 FZA sing 104 n n C8 C12 FZA sing 105 n n C12 N17 FZA sing 106 n y C23 C19 FZA doub 107 n y C23 C22 FZA sing 108 n y C19 C18 FZA sing 109 n y N17 C18 FZA sing 110 n y C22 C21 FZA doub 111 n y C18 C20 FZA doub 112 n y C21 C20 FZA sing 113 n y C1 H1 FZA sing 114 n n C8 H2 FZA sing 115 n n C3 H3 FZA sing 116 n n C2 H4 FZA sing 117 n n C25 H5 FZA sing 118 n n C25 H6 FZA sing 119 n n C25 H7 FZA sing 120 n n C26 H8 FZA sing 121 n n C26 H9 FZA sing 122 n n C26 H10 FZA sing 123 n n N17 H11 FZA sing 124 n n C20 H12 FZA sing 125 n n C21 H13 FZA sing 126 n n C22 H14 FZA sing 127 n n C28 H15 FZA sing 128 n n C28 H16 FZA sing 129 n n C28 H17 FZA sing 130 n n C15 H18 FZA sing 131 n n C15 H19 FZA sing 132 n n C16 H20 FZA sing 133 n n C16 H21 FZA sing 134 n n # _atom_sites.entry_id 6VBI _atom_sites.fract_transf_matrix[1][1] 0.015157 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011693 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00804 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 FZA A 1 901 1 FZA EVO . D 2 FZA B 1 901 1 FZA EVO . E 3 HOH A 1 1001 76 HOH HOH . E 3 HOH A 2 1002 44 HOH HOH . E 3 HOH A 3 1003 68 HOH HOH . E 3 HOH A 4 1004 47 HOH HOH . E 3 HOH A 5 1005 34 HOH HOH . E 3 HOH A 6 1006 122 HOH HOH . E 3 HOH A 7 1007 138 HOH HOH . E 3 HOH A 8 1008 73 HOH HOH . E 3 HOH A 9 1009 46 HOH HOH . E 3 HOH A 10 1010 102 HOH HOH . E 3 HOH A 11 1011 50 HOH HOH . E 3 HOH A 12 1012 136 HOH HOH . E 3 HOH A 13 1013 30 HOH HOH . E 3 HOH A 14 1014 56 HOH HOH . E 3 HOH A 15 1015 107 HOH HOH . E 3 HOH A 16 1016 25 HOH HOH . E 3 HOH A 17 1017 49 HOH HOH . E 3 HOH A 18 1018 124 HOH HOH . E 3 HOH A 19 1019 57 HOH HOH . E 3 HOH A 20 1020 16 HOH HOH . E 3 HOH A 21 1021 6 HOH HOH . E 3 HOH A 22 1022 27 HOH HOH . E 3 HOH A 23 1023 97 HOH HOH . E 3 HOH A 24 1024 117 HOH HOH . E 3 HOH A 25 1025 1 HOH HOH . E 3 HOH A 26 1026 77 HOH HOH . E 3 HOH A 27 1027 135 HOH HOH . E 3 HOH A 28 1028 32 HOH HOH . E 3 HOH A 29 1029 119 HOH HOH . E 3 HOH A 30 1030 51 HOH HOH . E 3 HOH A 31 1031 17 HOH HOH . E 3 HOH A 32 1032 8 HOH HOH . E 3 HOH A 33 1033 3 HOH HOH . E 3 HOH A 34 1034 40 HOH HOH . E 3 HOH A 35 1035 5 HOH HOH . E 3 HOH A 36 1036 53 HOH HOH . E 3 HOH A 37 1037 101 HOH HOH . E 3 HOH A 38 1038 114 HOH HOH . E 3 HOH A 39 1039 35 HOH HOH . E 3 HOH A 40 1040 7 HOH HOH . E 3 HOH A 41 1041 139 HOH HOH . E 3 HOH A 42 1042 75 HOH HOH . E 3 HOH A 43 1043 45 HOH HOH . E 3 HOH A 44 1044 69 HOH HOH . E 3 HOH A 45 1045 140 HOH HOH . E 3 HOH A 46 1046 28 HOH HOH . E 3 HOH A 47 1047 145 HOH HOH . E 3 HOH A 48 1048 29 HOH HOH . E 3 HOH A 49 1049 123 HOH HOH . E 3 HOH A 50 1050 115 HOH HOH . E 3 HOH A 51 1051 24 HOH HOH . E 3 HOH A 52 1052 41 HOH HOH . E 3 HOH A 53 1053 33 HOH HOH . E 3 HOH A 54 1054 54 HOH HOH . E 3 HOH A 55 1055 121 HOH HOH . E 3 HOH A 56 1056 84 HOH HOH . E 3 HOH A 57 1057 48 HOH HOH . E 3 HOH A 58 1058 31 HOH HOH . E 3 HOH A 59 1059 63 HOH HOH . E 3 HOH A 60 1060 134 HOH HOH . E 3 HOH A 61 1061 65 HOH HOH . E 3 HOH A 62 1062 118 HOH HOH . E 3 HOH A 63 1063 23 HOH HOH . E 3 HOH A 64 1064 18 HOH HOH . E 3 HOH A 65 1065 120 HOH HOH . E 3 HOH A 66 1066 112 HOH HOH . E 3 HOH A 67 1067 42 HOH HOH . E 3 HOH A 68 1068 67 HOH HOH . E 3 HOH A 69 1069 137 HOH HOH . E 3 HOH A 70 1070 72 HOH HOH . E 3 HOH A 71 1071 22 HOH HOH . E 3 HOH A 72 1072 98 HOH HOH . E 3 HOH A 73 1073 79 HOH HOH . E 3 HOH A 74 1074 99 HOH HOH . E 3 HOH A 75 1075 43 HOH HOH . F 3 HOH B 1 1001 38 HOH HOH . F 3 HOH B 2 1002 62 HOH HOH . F 3 HOH B 3 1003 60 HOH HOH . F 3 HOH B 4 1004 11 HOH HOH . F 3 HOH B 5 1005 127 HOH HOH . F 3 HOH B 6 1006 126 HOH HOH . F 3 HOH B 7 1007 91 HOH HOH . F 3 HOH B 8 1008 15 HOH HOH . F 3 HOH B 9 1009 19 HOH HOH . F 3 HOH B 10 1010 82 HOH HOH . F 3 HOH B 11 1011 26 HOH HOH . F 3 HOH B 12 1012 14 HOH HOH . F 3 HOH B 13 1013 129 HOH HOH . F 3 HOH B 14 1014 100 HOH HOH . F 3 HOH B 15 1015 2 HOH HOH . F 3 HOH B 16 1016 93 HOH HOH . F 3 HOH B 17 1017 116 HOH HOH . F 3 HOH B 18 1018 125 HOH HOH . F 3 HOH B 19 1019 132 HOH HOH . F 3 HOH B 20 1020 106 HOH HOH . F 3 HOH B 21 1021 55 HOH HOH . F 3 HOH B 22 1022 59 HOH HOH . F 3 HOH B 23 1023 103 HOH HOH . F 3 HOH B 24 1024 4 HOH HOH . F 3 HOH B 25 1025 10 HOH HOH . F 3 HOH B 26 1026 86 HOH HOH . F 3 HOH B 27 1027 96 HOH HOH . F 3 HOH B 28 1028 143 HOH HOH . F 3 HOH B 29 1029 39 HOH HOH . F 3 HOH B 30 1030 13 HOH HOH . F 3 HOH B 31 1031 58 HOH HOH . F 3 HOH B 32 1032 20 HOH HOH . F 3 HOH B 33 1033 131 HOH HOH . F 3 HOH B 34 1034 128 HOH HOH . F 3 HOH B 35 1035 104 HOH HOH . F 3 HOH B 36 1036 61 HOH HOH . F 3 HOH B 37 1037 110 HOH HOH . F 3 HOH B 38 1038 133 HOH HOH . F 3 HOH B 39 1039 74 HOH HOH . F 3 HOH B 40 1040 85 HOH HOH . F 3 HOH B 41 1041 64 HOH HOH . F 3 HOH B 42 1042 71 HOH HOH . F 3 HOH B 43 1043 142 HOH HOH . F 3 HOH B 44 1044 37 HOH HOH . F 3 HOH B 45 1045 70 HOH HOH . F 3 HOH B 46 1046 87 HOH HOH . F 3 HOH B 47 1047 83 HOH HOH . F 3 HOH B 48 1048 9 HOH HOH . F 3 HOH B 49 1049 88 HOH HOH . F 3 HOH B 50 1050 66 HOH HOH . F 3 HOH B 51 1051 111 HOH HOH . F 3 HOH B 52 1052 12 HOH HOH . F 3 HOH B 53 1053 36 HOH HOH . F 3 HOH B 54 1054 81 HOH HOH . F 3 HOH B 55 1055 21 HOH HOH . F 3 HOH B 56 1056 108 HOH HOH . F 3 HOH B 57 1057 109 HOH HOH . F 3 HOH B 58 1058 92 HOH HOH . F 3 HOH B 59 1059 78 HOH HOH . F 3 HOH B 60 1060 89 HOH HOH . F 3 HOH B 61 1061 90 HOH HOH . F 3 HOH B 62 1062 130 HOH HOH . F 3 HOH B 63 1063 146 HOH HOH . F 3 HOH B 64 1064 105 HOH HOH . F 3 HOH B 65 1065 80 HOH HOH . F 3 HOH B 66 1066 144 HOH HOH . F 3 HOH B 67 1067 113 HOH HOH . F 3 HOH B 68 1068 141 HOH HOH . F 3 HOH B 69 1069 95 HOH HOH . F 3 HOH B 70 1070 94 HOH HOH . F 3 HOH B 71 1071 52 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 FZA . . . D 2 5.754 44.401 118.97 1 20.7 ? C1 FZA 901 B 1 HETATM 2 C C8 FZA . . . D 2 10.268 42.457 118.06 1 27.97 ? C8 FZA 901 B 1 HETATM 3 C C6 FZA . . . D 2 6.344 43.173 119.222 1 22 ? C6 FZA 901 B 1 HETATM 4 C C5 FZA . . . D 2 7.611 42.845 118.68 1 21.1 ? C5 FZA 901 B 1 HETATM 5 C C4 FZA . . . D 2 8.284 43.839 117.98 1 21.24 ? C4 FZA 901 B 1 HETATM 6 C C3 FZA . . . D 2 7.691 45.064 117.708 1 21.88 ? C3 FZA 901 B 1 HETATM 7 C C2 FZA . . . D 2 6.422 45.334 118.197 1 21.82 ? C2 FZA 901 B 1 HETATM 8 C C10 FZA . . . D 2 8.241 41.541 118.93 1 22.78 ? C10 FZA 901 B 1 HETATM 9 C C14 FZA . . . D 2 12.244 41.037 117.761 1 30.29 ? C14 FZA 901 B 1 HETATM 10 C C12 FZA . . . D 2 11.686 42.308 118.046 1 28.75 ? C12 FZA 901 B 1 HETATM 11 O O11 FZA . . . D 2 7.598 40.548 119.228 1 24.4 ? O11 FZA 901 B 1 HETATM 12 O O24 FZA . . . D 2 5.819 42.295 120.126 1 21.51 ? O24 FZA 901 B 1 HETATM 13 C C25 FZA . . . D 2 4.734 42.775 120.932 1 18.92 ? C25 FZA 901 B 1 HETATM 14 N N7 FZA . . . D 2 9.636 43.582 117.686 1 27.15 ? N7 FZA 901 B 1 HETATM 15 C C26 FZA . . . D 2 10.314 44.635 116.92 1 21.71 ? C26 FZA 901 B 1 HETATM 16 N N17 FZA . . . D 2 12.774 43.261 118.237 1 31.17 ? N17 FZA 901 B 1 HETATM 17 C C18 FZA . . . D 2 13.955 42.557 118.05 1 30.08 ? C18 FZA 901 B 1 HETATM 18 C C20 FZA . . . D 2 15.276 43.024 118.105 1 30.48 ? C20 FZA 901 B 1 HETATM 19 C C21 FZA . . . D 2 16.321 42.149 117.86 1 25.21 ? C21 FZA 901 B 1 HETATM 20 C C22 FZA . . . D 2 16.076 40.813 117.571 1 31.67 ? C22 FZA 901 B 1 HETATM 21 C C23 FZA . . . D 2 14.776 40.325 117.535 1 35.07 ? C23 FZA 901 B 1 HETATM 22 O O27 FZA . . . D 2 14.459 38.995 117.403 1 38.29 ? O27 FZA 901 B 1 HETATM 23 C C28 FZA . . . D 2 15.519 38.039 117.459 1 27.21 ? C28 FZA 901 B 1 HETATM 24 C C19 FZA . . . D 2 13.686 41.2 117.759 1 31.13 ? C19 FZA 901 B 1 HETATM 25 C C15 FZA . . . D 2 11.452 39.793 118.012 1 24.62 ? C15 FZA 901 B 1 HETATM 26 C C16 FZA . . . D 2 10.256 40.133 118.911 1 22.14 ? C16 FZA 901 B 1 HETATM 27 N N9 FZA . . . D 2 9.6 41.43 118.61 1 21.27 ? N9 FZA 901 B 1 # _model_server_stats.io_time_ms 32 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 267 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 27 #