data_6VCR # _model_server_result.job_id lu0MjVgGOTRjx0ofogVPyA _model_server_result.datetime_utc '2024-12-27 03:41:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6vcr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":204}' # _entry.id 6VCR # _exptl.entry_id 6VCR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 177.975 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description PYROPHOSPHATE _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 99.022 _cell.angle_gamma 90 _cell.entry_id 6VCR _cell.length_a 78.525 _cell.length_b 38.811 _cell.length_c 57.692 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6VCR _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall 'C 2y' _symmetry.space_group_name_H-M 'C 1 2 1' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id E _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'H4 O7 P2' _chem_comp.formula_weight 177.975 _chem_comp.id PPV _chem_comp.mon_nstd_flag . _chem_comp.name PYROPHOSPHATE _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O11 P1 PPV sing 306 n n O11 H11 PPV sing 307 n n P1 O21 PPV sing 308 n n P1 O31 PPV doub 309 n n P1 OPP PPV sing 310 n n O21 H21 PPV sing 311 n n OPP P2 PPV sing 312 n n P2 O12 PPV sing 313 n n P2 O22 PPV doub 314 n n P2 O32 PPV sing 315 n n O12 H12 PPV sing 316 n n O32 H32 PPV sing 317 n n # _atom_sites.entry_id 6VCR _atom_sites.fract_transf_matrix[1][1] 0.012735 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.002022 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.025766 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.017551 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CTP A 1 201 1 CTP CTP . C 2 CTP A 1 202 2 CTP CTP . D 2 CTP A 1 203 3 CTP CTP . E 3 PPV A 1 204 4 PPV PPV . F 4 SO4 A 1 205 1 SO4 SO4 . G 5 HOH A 1 301 63 HOH HOH . G 5 HOH A 2 302 134 HOH HOH . G 5 HOH A 3 303 140 HOH HOH . G 5 HOH A 4 304 143 HOH HOH . G 5 HOH A 5 305 172 HOH HOH . G 5 HOH A 6 306 27 HOH HOH . G 5 HOH A 7 307 147 HOH HOH . G 5 HOH A 8 308 199 HOH HOH . G 5 HOH A 9 309 130 HOH HOH . G 5 HOH A 10 310 193 HOH HOH . G 5 HOH A 11 311 128 HOH HOH . G 5 HOH A 12 312 161 HOH HOH . G 5 HOH A 13 313 58 HOH HOH . G 5 HOH A 14 314 176 HOH HOH . G 5 HOH A 15 315 12 HOH HOH . G 5 HOH A 16 316 56 HOH HOH . G 5 HOH A 17 317 78 HOH HOH . G 5 HOH A 18 318 155 HOH HOH . G 5 HOH A 19 319 109 HOH HOH . G 5 HOH A 20 320 30 HOH HOH . G 5 HOH A 21 321 178 HOH HOH . G 5 HOH A 22 322 149 HOH HOH . G 5 HOH A 23 323 21 HOH HOH . G 5 HOH A 24 324 124 HOH HOH . G 5 HOH A 25 325 94 HOH HOH . G 5 HOH A 26 326 9 HOH HOH . G 5 HOH A 27 327 165 HOH HOH . G 5 HOH A 28 328 60 HOH HOH . G 5 HOH A 29 329 17 HOH HOH . G 5 HOH A 30 330 115 HOH HOH . G 5 HOH A 31 331 31 HOH HOH . G 5 HOH A 32 332 107 HOH HOH . G 5 HOH A 33 333 104 HOH HOH . G 5 HOH A 34 334 185 HOH HOH . G 5 HOH A 35 335 202 HOH HOH . G 5 HOH A 36 336 26 HOH HOH . G 5 HOH A 37 337 189 HOH HOH . G 5 HOH A 38 338 121 HOH HOH . G 5 HOH A 39 339 13 HOH HOH . G 5 HOH A 40 340 196 HOH HOH . G 5 HOH A 41 341 112 HOH HOH . G 5 HOH A 42 342 64 HOH HOH . G 5 HOH A 43 343 10 HOH HOH . G 5 HOH A 44 344 95 HOH HOH . G 5 HOH A 45 345 19 HOH HOH . G 5 HOH A 46 346 118 HOH HOH . G 5 HOH A 47 347 6 HOH HOH . G 5 HOH A 48 348 65 HOH HOH . G 5 HOH A 49 349 52 HOH HOH . G 5 HOH A 50 350 18 HOH HOH . G 5 HOH A 51 351 7 HOH HOH . G 5 HOH A 52 352 72 HOH HOH . G 5 HOH A 53 353 34 HOH HOH . G 5 HOH A 54 354 61 HOH HOH . G 5 HOH A 55 355 62 HOH HOH . G 5 HOH A 56 356 111 HOH HOH . G 5 HOH A 57 357 14 HOH HOH . G 5 HOH A 58 358 16 HOH HOH . G 5 HOH A 59 359 117 HOH HOH . G 5 HOH A 60 360 83 HOH HOH . G 5 HOH A 61 361 114 HOH HOH . G 5 HOH A 62 362 44 HOH HOH . G 5 HOH A 63 363 50 HOH HOH . G 5 HOH A 64 364 69 HOH HOH . G 5 HOH A 65 365 70 HOH HOH . G 5 HOH A 66 366 35 HOH HOH . G 5 HOH A 67 367 23 HOH HOH . G 5 HOH A 68 368 200 HOH HOH . G 5 HOH A 69 369 32 HOH HOH . G 5 HOH A 70 370 42 HOH HOH . G 5 HOH A 71 371 41 HOH HOH . G 5 HOH A 72 372 28 HOH HOH . G 5 HOH A 73 373 116 HOH HOH . G 5 HOH A 74 374 129 HOH HOH . G 5 HOH A 75 375 1 HOH HOH . G 5 HOH A 76 376 99 HOH HOH . G 5 HOH A 77 377 48 HOH HOH . G 5 HOH A 78 378 25 HOH HOH . G 5 HOH A 79 379 43 HOH HOH . G 5 HOH A 80 380 188 HOH HOH . G 5 HOH A 81 381 8 HOH HOH . G 5 HOH A 82 382 167 HOH HOH . G 5 HOH A 83 383 127 HOH HOH . G 5 HOH A 84 384 24 HOH HOH . G 5 HOH A 85 385 38 HOH HOH . G 5 HOH A 86 386 57 HOH HOH . G 5 HOH A 87 387 2 HOH HOH . G 5 HOH A 88 388 53 HOH HOH . G 5 HOH A 89 389 102 HOH HOH . G 5 HOH A 90 390 105 HOH HOH . G 5 HOH A 91 391 73 HOH HOH . G 5 HOH A 92 392 86 HOH HOH . G 5 HOH A 93 393 132 HOH HOH . G 5 HOH A 94 394 5 HOH HOH . G 5 HOH A 95 395 46 HOH HOH . G 5 HOH A 96 396 103 HOH HOH . G 5 HOH A 97 397 22 HOH HOH . G 5 HOH A 98 398 4 HOH HOH . G 5 HOH A 99 399 198 HOH HOH . G 5 HOH A 100 400 20 HOH HOH . G 5 HOH A 101 401 135 HOH HOH . G 5 HOH A 102 402 68 HOH HOH . G 5 HOH A 103 403 11 HOH HOH . G 5 HOH A 104 404 110 HOH HOH . G 5 HOH A 105 405 141 HOH HOH . G 5 HOH A 106 406 59 HOH HOH . G 5 HOH A 107 407 171 HOH HOH . G 5 HOH A 108 408 168 HOH HOH . G 5 HOH A 109 409 75 HOH HOH . G 5 HOH A 110 410 106 HOH HOH . G 5 HOH A 111 411 45 HOH HOH . G 5 HOH A 112 412 79 HOH HOH . G 5 HOH A 113 413 113 HOH HOH . G 5 HOH A 114 414 142 HOH HOH . G 5 HOH A 115 415 39 HOH HOH . G 5 HOH A 116 416 3 HOH HOH . G 5 HOH A 117 417 55 HOH HOH . G 5 HOH A 118 418 47 HOH HOH . G 5 HOH A 119 419 90 HOH HOH . G 5 HOH A 120 420 133 HOH HOH . G 5 HOH A 121 421 85 HOH HOH . G 5 HOH A 122 422 80 HOH HOH . G 5 HOH A 123 423 74 HOH HOH . G 5 HOH A 124 424 81 HOH HOH . G 5 HOH A 125 425 156 HOH HOH . G 5 HOH A 126 426 93 HOH HOH . G 5 HOH A 127 427 54 HOH HOH . G 5 HOH A 128 428 181 HOH HOH . G 5 HOH A 129 429 82 HOH HOH . G 5 HOH A 130 430 122 HOH HOH . G 5 HOH A 131 431 88 HOH HOH . G 5 HOH A 132 432 15 HOH HOH . G 5 HOH A 133 433 148 HOH HOH . G 5 HOH A 134 434 139 HOH HOH . G 5 HOH A 135 435 98 HOH HOH . G 5 HOH A 136 436 191 HOH HOH . G 5 HOH A 137 437 137 HOH HOH . G 5 HOH A 138 438 190 HOH HOH . G 5 HOH A 139 439 138 HOH HOH . G 5 HOH A 140 440 37 HOH HOH . G 5 HOH A 141 441 76 HOH HOH . G 5 HOH A 142 442 71 HOH HOH . G 5 HOH A 143 443 192 HOH HOH . G 5 HOH A 144 444 174 HOH HOH . G 5 HOH A 145 445 84 HOH HOH . G 5 HOH A 146 446 91 HOH HOH . G 5 HOH A 147 447 203 HOH HOH . G 5 HOH A 148 448 33 HOH HOH . G 5 HOH A 149 449 195 HOH HOH . G 5 HOH A 150 450 100 HOH HOH . G 5 HOH A 151 451 184 HOH HOH . G 5 HOH A 152 452 159 HOH HOH . G 5 HOH A 153 453 177 HOH HOH . G 5 HOH A 154 454 153 HOH HOH . G 5 HOH A 155 455 29 HOH HOH . G 5 HOH A 156 456 179 HOH HOH . G 5 HOH A 157 457 144 HOH HOH . G 5 HOH A 158 458 36 HOH HOH . G 5 HOH A 159 459 87 HOH HOH . G 5 HOH A 160 460 123 HOH HOH . G 5 HOH A 161 461 67 HOH HOH . G 5 HOH A 162 462 120 HOH HOH . G 5 HOH A 163 463 89 HOH HOH . G 5 HOH A 164 464 157 HOH HOH . G 5 HOH A 165 465 183 HOH HOH . G 5 HOH A 166 466 49 HOH HOH . G 5 HOH A 167 467 96 HOH HOH . G 5 HOH A 168 468 108 HOH HOH . G 5 HOH A 169 469 152 HOH HOH . G 5 HOH A 170 470 175 HOH HOH . G 5 HOH A 171 471 194 HOH HOH . G 5 HOH A 172 472 136 HOH HOH . G 5 HOH A 173 473 170 HOH HOH . G 5 HOH A 174 474 77 HOH HOH . G 5 HOH A 175 475 186 HOH HOH . G 5 HOH A 176 476 66 HOH HOH . G 5 HOH A 177 477 101 HOH HOH . G 5 HOH A 178 478 151 HOH HOH . G 5 HOH A 179 479 166 HOH HOH . G 5 HOH A 180 480 40 HOH HOH . G 5 HOH A 181 481 182 HOH HOH . G 5 HOH A 182 482 197 HOH HOH . G 5 HOH A 183 483 51 HOH HOH . G 5 HOH A 184 484 92 HOH HOH . G 5 HOH A 185 485 97 HOH HOH . G 5 HOH A 186 486 154 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O11 PPV . . . E 3 13.685 -18.825 13.356 0.62 38.54 ? O11 PPV 204 A 1 HETATM 2 P P1 PPV . . . E 3 14.616 -19.831 13.984 0.62 31.34 ? P1 PPV 204 A 1 HETATM 3 O O21 PPV . . . E 3 14.883 -19.468 15.428 0.62 31.61 ? O21 PPV 204 A 1 HETATM 4 O O31 PPV . . . E 3 15.917 -19.827 13.198 0.62 25.87 ? O31 PPV 204 A 1 HETATM 5 O OPP PPV . . . E 3 13.815 -21.269 13.885 0.62 27.44 ? OPP PPV 204 A 1 HETATM 6 P P2 PPV . . . E 3 13.935 -22.609 14.831 0.62 26.72 ? P2 PPV 204 A 1 HETATM 7 O O12 PPV . . . E 3 13.777 -22.212 16.28 0.62 32.05 ? O12 PPV 204 A 1 HETATM 8 O O22 PPV . . . E 3 12.804 -23.536 14.456 0.62 32.5 ? O22 PPV 204 A 1 HETATM 9 O O32 PPV . . . E 3 15.239 -23.324 14.61 0.62 28.49 ? O32 PPV 204 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 13 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 298 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 9 #