data_6VEJ
#
_model_server_result.job_id            tDDRZpHBeP5Ap7-EaFzyng 
_model_server_result.datetime_utc      '2025-03-11 06:59:45' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6vej 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":701}' 
#
_entry.id    6VEJ 
#
_exptl.entry_id    6VEJ 
_exptl.method      'ELECTRON MICROSCOPY' 
#
_entity.details                     ? 
_entity.formula_weight              594.992 
_entity.id                          4 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            '(2R)-2-(hexadecanoyloxy)propyl nonadecanoate' 
_entity.pdbx_number_of_molecules    3 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6VEJ 
_cell.length_a            1 
_cell.length_b            1 
_cell.length_c            1 
_cell.Z_PDB               ? 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6VEJ 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 1' 
#
_pdbx_struct_assembly.method_details        ? 
_pdbx_struct_assembly.oligomeric_details    hexameric 
_pdbx_struct_assembly.oligomeric_count      6 
_pdbx_struct_assembly.details               author_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D,E,F,G,H,I,J,K,L,M,N,O 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    ? 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 4 J N N 
? 4 L N N 
? 4 N N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 D SG CYS 1 P CYS 1 1_555 J C41 E2V . P E2V 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.816 ? 
covale ? covale2 D N CYS 1 P CYS 1 1_555 K C1 PLM . P PLM 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.37 ? 
covale ? covale3 E SG CYS 1 Q CYS 1 1_555 L C41 E2V . Q E2V 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.815 ? 
covale ? covale4 E N CYS 1 Q CYS 1 1_555 M C1 PLM . Q PLM 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.37 ? 
covale ? covale5 F SG CYS 1 R CYS 1 1_555 N C41 E2V . R E2V 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.816 ? 
covale ? covale6 F N CYS 1 R CYS 1 1_555 O C1 PLM . R PLM 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.37 ? 
#
_chem_comp.formula           'C38 H74 O4' 
_chem_comp.formula_weight    594.992 
_chem_comp.id                E2V 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              '(2R)-2-(hexadecanoyloxy)propyl nonadecanoate' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O40 C24 E2V doub 83 n n 
C24 O23 E2V sing 84 n n 
C24 C25 E2V sing 85 n n 
C41 C22 E2V sing 86 n n 
C01 C02 E2V sing 87 n n 
C02 C03 E2V sing 88 n n 
C26 C25 E2V sing 89 n n 
C26 C27 E2V sing 90 n n 
O23 C22 E2V sing 91 n n 
C28 C27 E2V sing 92 n n 
C28 C29 E2V sing 93 n n 
C22 C21 E2V sing 94 n n 
C03 C04 E2V sing 95 n n 
C29 C30 E2V sing 96 n n 
C04 C05 E2V sing 97 n n 
C30 C31 E2V sing 98 n n 
C21 O20 E2V sing 99 n n 
O20 C19 E2V sing 100 n n 
C05 C06 E2V sing 101 n n 
C06 C07 E2V sing 102 n n 
C07 C08 E2V sing 103 n n 
C31 C32 E2V sing 104 n n 
C19 C18 E2V sing 105 n n 
C19 O42 E2V doub 106 n n 
C08 C09 E2V sing 107 n n 
C18 C17 E2V sing 108 n n 
C32 C33 E2V sing 109 n n 
C09 C10 E2V sing 110 n n 
C39 C38 E2V sing 111 n n 
C17 C16 E2V sing 112 n n 
C33 C34 E2V sing 113 n n 
C15 C16 E2V sing 114 n n 
C15 C14 E2V sing 115 n n 
C38 C37 E2V sing 116 n n 
C34 C35 E2V sing 117 n n 
C10 C11 E2V sing 118 n n 
C13 C14 E2V sing 119 n n 
C13 C12 E2V sing 120 n n 
C11 C12 E2V sing 121 n n 
C37 C36 E2V sing 122 n n 
C35 C36 E2V sing 123 n n 
C10 H1 E2V sing 124 n n 
C10 H2 E2V sing 125 n n 
C11 H3 E2V sing 126 n n 
C11 H4 E2V sing 127 n n 
C12 H5 E2V sing 128 n n 
C12 H6 E2V sing 129 n n 
C13 H7 E2V sing 130 n n 
C13 H8 E2V sing 131 n n 
C14 H9 E2V sing 132 n n 
C14 H10 E2V sing 133 n n 
C15 H11 E2V sing 134 n n 
C15 H12 E2V sing 135 n n 
C16 H13 E2V sing 136 n n 
C16 H14 E2V sing 137 n n 
C17 H15 E2V sing 138 n n 
C17 H16 E2V sing 139 n n 
C18 H17 E2V sing 140 n n 
C18 H18 E2V sing 141 n n 
C22 H19 E2V sing 142 n n 
C25 H20 E2V sing 143 n n 
C25 H21 E2V sing 144 n n 
C01 H22 E2V sing 145 n n 
C01 H23 E2V sing 146 n n 
C01 H24 E2V sing 147 n n 
C02 H25 E2V sing 148 n n 
C02 H26 E2V sing 149 n n 
C03 H27 E2V sing 150 n n 
C03 H28 E2V sing 151 n n 
C04 H29 E2V sing 152 n n 
C04 H30 E2V sing 153 n n 
C05 H31 E2V sing 154 n n 
C05 H32 E2V sing 155 n n 
C06 H33 E2V sing 156 n n 
C06 H34 E2V sing 157 n n 
C07 H35 E2V sing 158 n n 
C07 H36 E2V sing 159 n n 
C08 H37 E2V sing 160 n n 
C08 H38 E2V sing 161 n n 
C09 H39 E2V sing 162 n n 
C09 H40 E2V sing 163 n n 
C21 H41 E2V sing 164 n n 
C21 H42 E2V sing 165 n n 
C26 H43 E2V sing 166 n n 
C26 H44 E2V sing 167 n n 
C27 H45 E2V sing 168 n n 
C27 H46 E2V sing 169 n n 
C28 H47 E2V sing 170 n n 
C28 H48 E2V sing 171 n n 
C29 H49 E2V sing 172 n n 
C29 H50 E2V sing 173 n n 
C30 H51 E2V sing 174 n n 
C30 H52 E2V sing 175 n n 
C31 H53 E2V sing 176 n n 
C31 H54 E2V sing 177 n n 
C32 H55 E2V sing 178 n n 
C32 H56 E2V sing 179 n n 
C33 H57 E2V sing 180 n n 
C33 H58 E2V sing 181 n n 
C34 H59 E2V sing 182 n n 
C34 H60 E2V sing 183 n n 
C35 H61 E2V sing 184 n n 
C35 H62 E2V sing 185 n n 
C36 H63 E2V sing 186 n n 
C36 H64 E2V sing 187 n n 
C37 H65 E2V sing 188 n n 
C37 H66 E2V sing 189 n n 
C38 H67 E2V sing 190 n n 
C38 H68 E2V sing 191 n n 
C39 H69 E2V sing 192 n n 
C39 H70 E2V sing 193 n n 
C39 H71 E2V sing 194 n n 
C41 H72 E2V sing 195 n n 
C41 H73 E2V sing 196 n n 
C41 H74 E2V sing 197 n n 
#
_atom_sites.entry_id                     6VEJ 
_atom_sites.fract_transf_matrix[1][1]    1 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    1 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    1 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
G 3 LMU A 1 1101 1050 LMU DMJ . 
H 3 LMU B 1 1101 1050 LMU DMJ . 
I 3 LMU C 1 1101 1050 LMU DMJ . 
J 4 E2V P 1 701 1034 E2V BPL . 
K 5 PLM P 1 702 1035 PLM CBG . 
L 4 E2V Q 1 701 1034 E2V BPL . 
M 5 PLM Q 1 702 1035 PLM CBG . 
N 4 E2V R 1 701 1034 E2V BPL . 
O 5 PLM R 1 702 1035 PLM CBG . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 E2V . . . L 4 47.37 93.94 118.034 1 162.65 ? C10 E2V 701 Q 1 
HETATM 2 C C11 E2V . . . L 4 46.833 94.021 116.608 1 162.65 ? C11 E2V 701 Q 1 
HETATM 3 C C12 E2V . . . L 4 47.726 93.291 115.61 1 162.65 ? C12 E2V 701 Q 1 
HETATM 4 C C13 E2V . . . L 4 48.094 94.168 114.416 1 162.65 ? C13 E2V 701 Q 1 
HETATM 5 C C14 E2V . . . L 4 47.891 93.447 113.087 1 162.65 ? C14 E2V 701 Q 1 
HETATM 6 C C15 E2V . . . L 4 48.812 93.976 111.991 1 162.65 ? C15 E2V 701 Q 1 
HETATM 7 C C16 E2V . . . L 4 49.694 92.88 111.4 1 162.65 ? C16 E2V 701 Q 1 
HETATM 8 C C17 E2V . . . L 4 50.854 92.516 112.321 1 162.65 ? C17 E2V 701 Q 1 
HETATM 9 C C18 E2V . . . L 4 52.196 93.012 111.789 1 162.65 ? C18 E2V 701 Q 1 
HETATM 10 C C19 E2V . . . L 4 52.621 94.334 112.421 1 162.65 ? C19 E2V 701 Q 1 
HETATM 11 C C22 E2V . . . L 4 56.063 94.096 112.385 1 162.65 ? C22 E2V 701 Q 1 
HETATM 12 O O23 E2V . . . L 4 55.814 94.502 113.701 1 162.65 ? O23 E2V 701 Q 1 
HETATM 13 C C25 E2V . . . L 4 56.196 92.353 114.987 1 162.65 ? C25 E2V 701 Q 1 
HETATM 14 C C01 E2V . . . L 4 46.437 101.945 120.17 1 162.65 ? C01 E2V 701 Q 1 
HETATM 15 C C02 E2V . . . L 4 46.967 101.599 121.56 1 162.65 ? C02 E2V 701 Q 1 
HETATM 16 C C03 E2V . . . L 4 48.183 100.677 121.502 1 162.65 ? C03 E2V 701 Q 1 
HETATM 17 C C04 E2V . . . L 4 47.793 99.204 121.415 1 162.65 ? C04 E2V 701 Q 1 
HETATM 18 C C05 E2V . . . L 4 48.005 98.632 120.015 1 162.65 ? C05 E2V 701 Q 1 
HETATM 19 C C06 E2V . . . L 4 46.84 97.755 119.566 1 162.65 ? C06 E2V 701 Q 1 
HETATM 20 C C07 E2V . . . L 4 47.169 96.267 119.644 1 162.65 ? C07 E2V 701 Q 1 
HETATM 21 C C08 E2V . . . L 4 45.924 95.391 119.532 1 162.65 ? C08 E2V 701 Q 1 
HETATM 22 C C09 E2V . . . L 4 46.254 93.973 119.076 1 162.65 ? C09 E2V 701 Q 1 
HETATM 23 C C21 E2V . . . L 4 54.773 94.027 111.565 1 162.65 ? C21 E2V 701 Q 1 
HETATM 24 C C24 E2V . . . L 4 56.556 93.799 114.654 1 162.65 ? C24 E2V 701 Q 1 
HETATM 25 C C26 E2V . . . L 4 56.743 91.364 113.96 1 162.65 ? C26 E2V 701 Q 1 
HETATM 26 C C27 E2V . . . L 4 57.086 90.015 114.588 1 162.65 ? C27 E2V 701 Q 1 
HETATM 27 C C28 E2V . . . L 4 56.511 88.842 113.797 1 162.65 ? C28 E2V 701 Q 1 
HETATM 28 C C29 E2V . . . L 4 57.268 88.596 112.494 1 162.65 ? C29 E2V 701 Q 1 
HETATM 29 C C30 E2V . . . L 4 56.733 87.387 111.733 1 162.65 ? C30 E2V 701 Q 1 
HETATM 30 C C31 E2V . . . L 4 57.845 86.449 111.272 1 162.65 ? C31 E2V 701 Q 1 
HETATM 31 C C32 E2V . . . L 4 57.498 84.981 111.505 1 162.65 ? C32 E2V 701 Q 1 
HETATM 32 C C33 E2V . . . L 4 56.747 84.762 112.817 1 162.65 ? C33 E2V 701 Q 1 
HETATM 33 C C34 E2V . . . L 4 56.737 83.293 113.237 1 162.65 ? C34 E2V 701 Q 1 
HETATM 34 C C35 E2V . . . L 4 55.485 82.92 114.029 1 162.65 ? C35 E2V 701 Q 1 
HETATM 35 C C36 E2V . . . L 4 55.68 81.651 114.856 1 162.65 ? C36 E2V 701 Q 1 
HETATM 36 C C37 E2V . . . L 4 54.36 81.1 115.389 1 162.65 ? C37 E2V 701 Q 1 
HETATM 37 C C38 E2V . . . L 4 53.639 80.226 114.364 1 162.65 ? C38 E2V 701 Q 1 
HETATM 38 C C39 E2V . . . L 4 52.616 81.013 113.549 1 162.65 ? C39 E2V 701 Q 1 
HETATM 39 C C41 E2V . . . L 4 57.124 94.995 111.785 1 162.65 ? C41 E2V 701 Q 1 
HETATM 40 O O20 E2V . . . L 4 53.821 94.938 112.035 1 162.65 ? O20 E2V 701 Q 1 
HETATM 41 O O40 E2V . . . L 4 57.462 94.325 115.206 1 162.65 ? O40 E2V 701 Q 1 
HETATM 42 O O42 E2V . . . L 4 51.934 94.848 113.239 1 162.65 ? O42 E2V 701 Q 1 
#
_model_server_stats.io_time_ms              70 
_model_server_stats.parse_time_ms           10 
_model_server_stats.create_model_time_ms    61 
_model_server_stats.query_time_ms           263 
_model_server_stats.encode_time_ms          3 
_model_server_stats.element_count           42 
#