data_6VEJ # _model_server_result.job_id k5Hv8qUqQdSfqatXUJGgYw _model_server_result.datetime_utc '2024-12-21 20:00:00' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6vej # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"L","auth_seq_id":701}' # _entry.id 6VEJ # _exptl.entry_id 6VEJ _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 594.992 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(2R)-2-(hexadecanoyloxy)propyl nonadecanoate' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6VEJ _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6VEJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 J N N ? 4 L N N ? 4 N N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 D SG CYS 1 P CYS 1 1_555 J C41 E2V . P E2V 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.816 ? covale ? covale2 D N CYS 1 P CYS 1 1_555 K C1 PLM . P PLM 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.37 ? covale ? covale3 E SG CYS 1 Q CYS 1 1_555 L C41 E2V . Q E2V 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.815 ? covale ? covale4 E N CYS 1 Q CYS 1 1_555 M C1 PLM . Q PLM 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.37 ? covale ? covale5 F SG CYS 1 R CYS 1 1_555 N C41 E2V . R E2V 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.816 ? covale ? covale6 F N CYS 1 R CYS 1 1_555 O C1 PLM . R PLM 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.37 ? # _chem_comp.formula 'C38 H74 O4' _chem_comp.formula_weight 594.992 _chem_comp.id E2V _chem_comp.mon_nstd_flag . _chem_comp.name '(2R)-2-(hexadecanoyloxy)propyl nonadecanoate' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O40 C24 E2V doub 83 n n C24 O23 E2V sing 84 n n C24 C25 E2V sing 85 n n C41 C22 E2V sing 86 n n C01 C02 E2V sing 87 n n C02 C03 E2V sing 88 n n C26 C25 E2V sing 89 n n C26 C27 E2V sing 90 n n O23 C22 E2V sing 91 n n C28 C27 E2V sing 92 n n C28 C29 E2V sing 93 n n C22 C21 E2V sing 94 n n C03 C04 E2V sing 95 n n C29 C30 E2V sing 96 n n C04 C05 E2V sing 97 n n C30 C31 E2V sing 98 n n C21 O20 E2V sing 99 n n O20 C19 E2V sing 100 n n C05 C06 E2V sing 101 n n C06 C07 E2V sing 102 n n C07 C08 E2V sing 103 n n C31 C32 E2V sing 104 n n C19 C18 E2V sing 105 n n C19 O42 E2V doub 106 n n C08 C09 E2V sing 107 n n C18 C17 E2V sing 108 n n C32 C33 E2V sing 109 n n C09 C10 E2V sing 110 n n C39 C38 E2V sing 111 n n C17 C16 E2V sing 112 n n C33 C34 E2V sing 113 n n C15 C16 E2V sing 114 n n C15 C14 E2V sing 115 n n C38 C37 E2V sing 116 n n C34 C35 E2V sing 117 n n C10 C11 E2V sing 118 n n C13 C14 E2V sing 119 n n C13 C12 E2V sing 120 n n C11 C12 E2V sing 121 n n C37 C36 E2V sing 122 n n C35 C36 E2V sing 123 n n C10 H1 E2V sing 124 n n C10 H2 E2V sing 125 n n C11 H3 E2V sing 126 n n C11 H4 E2V sing 127 n n C12 H5 E2V sing 128 n n C12 H6 E2V sing 129 n n C13 H7 E2V sing 130 n n C13 H8 E2V sing 131 n n C14 H9 E2V sing 132 n n C14 H10 E2V sing 133 n n C15 H11 E2V sing 134 n n C15 H12 E2V sing 135 n n C16 H13 E2V sing 136 n n C16 H14 E2V sing 137 n n C17 H15 E2V sing 138 n n C17 H16 E2V sing 139 n n C18 H17 E2V sing 140 n n C18 H18 E2V sing 141 n n C22 H19 E2V sing 142 n n C25 H20 E2V sing 143 n n C25 H21 E2V sing 144 n n C01 H22 E2V sing 145 n n C01 H23 E2V sing 146 n n C01 H24 E2V sing 147 n n C02 H25 E2V sing 148 n n C02 H26 E2V sing 149 n n C03 H27 E2V sing 150 n n C03 H28 E2V sing 151 n n C04 H29 E2V sing 152 n n C04 H30 E2V sing 153 n n C05 H31 E2V sing 154 n n C05 H32 E2V sing 155 n n C06 H33 E2V sing 156 n n C06 H34 E2V sing 157 n n C07 H35 E2V sing 158 n n C07 H36 E2V sing 159 n n C08 H37 E2V sing 160 n n C08 H38 E2V sing 161 n n C09 H39 E2V sing 162 n n C09 H40 E2V sing 163 n n C21 H41 E2V sing 164 n n C21 H42 E2V sing 165 n n C26 H43 E2V sing 166 n n C26 H44 E2V sing 167 n n C27 H45 E2V sing 168 n n C27 H46 E2V sing 169 n n C28 H47 E2V sing 170 n n C28 H48 E2V sing 171 n n C29 H49 E2V sing 172 n n C29 H50 E2V sing 173 n n C30 H51 E2V sing 174 n n C30 H52 E2V sing 175 n n C31 H53 E2V sing 176 n n C31 H54 E2V sing 177 n n C32 H55 E2V sing 178 n n C32 H56 E2V sing 179 n n C33 H57 E2V sing 180 n n C33 H58 E2V sing 181 n n C34 H59 E2V sing 182 n n C34 H60 E2V sing 183 n n C35 H61 E2V sing 184 n n C35 H62 E2V sing 185 n n C36 H63 E2V sing 186 n n C36 H64 E2V sing 187 n n C37 H65 E2V sing 188 n n C37 H66 E2V sing 189 n n C38 H67 E2V sing 190 n n C38 H68 E2V sing 191 n n C39 H69 E2V sing 192 n n C39 H70 E2V sing 193 n n C39 H71 E2V sing 194 n n C41 H72 E2V sing 195 n n C41 H73 E2V sing 196 n n C41 H74 E2V sing 197 n n # _atom_sites.entry_id 6VEJ _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 3 LMU A 1 1101 1050 LMU DMJ . H 3 LMU B 1 1101 1050 LMU DMJ . I 3 LMU C 1 1101 1050 LMU DMJ . J 4 E2V P 1 701 1034 E2V BPL . K 5 PLM P 1 702 1035 PLM CBG . L 4 E2V Q 1 701 1034 E2V BPL . M 5 PLM Q 1 702 1035 PLM CBG . N 4 E2V R 1 701 1034 E2V BPL . O 5 PLM R 1 702 1035 PLM CBG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 E2V . . . L 4 47.37 93.94 118.034 1 162.65 ? C10 E2V 701 Q 1 HETATM 2 C C11 E2V . . . L 4 46.833 94.021 116.608 1 162.65 ? C11 E2V 701 Q 1 HETATM 3 C C12 E2V . . . L 4 47.726 93.291 115.61 1 162.65 ? C12 E2V 701 Q 1 HETATM 4 C C13 E2V . . . L 4 48.094 94.168 114.416 1 162.65 ? C13 E2V 701 Q 1 HETATM 5 C C14 E2V . . . L 4 47.891 93.447 113.087 1 162.65 ? C14 E2V 701 Q 1 HETATM 6 C C15 E2V . . . L 4 48.812 93.976 111.991 1 162.65 ? C15 E2V 701 Q 1 HETATM 7 C C16 E2V . . . L 4 49.694 92.88 111.4 1 162.65 ? C16 E2V 701 Q 1 HETATM 8 C C17 E2V . . . L 4 50.854 92.516 112.321 1 162.65 ? C17 E2V 701 Q 1 HETATM 9 C C18 E2V . . . L 4 52.196 93.012 111.789 1 162.65 ? C18 E2V 701 Q 1 HETATM 10 C C19 E2V . . . L 4 52.621 94.334 112.421 1 162.65 ? C19 E2V 701 Q 1 HETATM 11 C C22 E2V . . . L 4 56.063 94.096 112.385 1 162.65 ? C22 E2V 701 Q 1 HETATM 12 O O23 E2V . . . L 4 55.814 94.502 113.701 1 162.65 ? O23 E2V 701 Q 1 HETATM 13 C C25 E2V . . . L 4 56.196 92.353 114.987 1 162.65 ? C25 E2V 701 Q 1 HETATM 14 C C01 E2V . . . L 4 46.437 101.945 120.17 1 162.65 ? C01 E2V 701 Q 1 HETATM 15 C C02 E2V . . . L 4 46.967 101.599 121.56 1 162.65 ? C02 E2V 701 Q 1 HETATM 16 C C03 E2V . . . L 4 48.183 100.677 121.502 1 162.65 ? C03 E2V 701 Q 1 HETATM 17 C C04 E2V . . . L 4 47.793 99.204 121.415 1 162.65 ? C04 E2V 701 Q 1 HETATM 18 C C05 E2V . . . L 4 48.005 98.632 120.015 1 162.65 ? C05 E2V 701 Q 1 HETATM 19 C C06 E2V . . . L 4 46.84 97.755 119.566 1 162.65 ? C06 E2V 701 Q 1 HETATM 20 C C07 E2V . . . L 4 47.169 96.267 119.644 1 162.65 ? C07 E2V 701 Q 1 HETATM 21 C C08 E2V . . . L 4 45.924 95.391 119.532 1 162.65 ? C08 E2V 701 Q 1 HETATM 22 C C09 E2V . . . L 4 46.254 93.973 119.076 1 162.65 ? C09 E2V 701 Q 1 HETATM 23 C C21 E2V . . . L 4 54.773 94.027 111.565 1 162.65 ? C21 E2V 701 Q 1 HETATM 24 C C24 E2V . . . L 4 56.556 93.799 114.654 1 162.65 ? C24 E2V 701 Q 1 HETATM 25 C C26 E2V . . . L 4 56.743 91.364 113.96 1 162.65 ? C26 E2V 701 Q 1 HETATM 26 C C27 E2V . . . L 4 57.086 90.015 114.588 1 162.65 ? C27 E2V 701 Q 1 HETATM 27 C C28 E2V . . . L 4 56.511 88.842 113.797 1 162.65 ? C28 E2V 701 Q 1 HETATM 28 C C29 E2V . . . L 4 57.268 88.596 112.494 1 162.65 ? C29 E2V 701 Q 1 HETATM 29 C C30 E2V . . . L 4 56.733 87.387 111.733 1 162.65 ? C30 E2V 701 Q 1 HETATM 30 C C31 E2V . . . L 4 57.845 86.449 111.272 1 162.65 ? C31 E2V 701 Q 1 HETATM 31 C C32 E2V . . . L 4 57.498 84.981 111.505 1 162.65 ? C32 E2V 701 Q 1 HETATM 32 C C33 E2V . . . L 4 56.747 84.762 112.817 1 162.65 ? C33 E2V 701 Q 1 HETATM 33 C C34 E2V . . . L 4 56.737 83.293 113.237 1 162.65 ? C34 E2V 701 Q 1 HETATM 34 C C35 E2V . . . L 4 55.485 82.92 114.029 1 162.65 ? C35 E2V 701 Q 1 HETATM 35 C C36 E2V . . . L 4 55.68 81.651 114.856 1 162.65 ? C36 E2V 701 Q 1 HETATM 36 C C37 E2V . . . L 4 54.36 81.1 115.389 1 162.65 ? C37 E2V 701 Q 1 HETATM 37 C C38 E2V . . . L 4 53.639 80.226 114.364 1 162.65 ? C38 E2V 701 Q 1 HETATM 38 C C39 E2V . . . L 4 52.616 81.013 113.549 1 162.65 ? C39 E2V 701 Q 1 HETATM 39 C C41 E2V . . . L 4 57.124 94.995 111.785 1 162.65 ? C41 E2V 701 Q 1 HETATM 40 O O20 E2V . . . L 4 53.821 94.938 112.035 1 162.65 ? O20 E2V 701 Q 1 HETATM 41 O O40 E2V . . . L 4 57.462 94.325 115.206 1 162.65 ? O40 E2V 701 Q 1 HETATM 42 O O42 E2V . . . L 4 51.934 94.848 113.239 1 162.65 ? O42 E2V 701 Q 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 91 _model_server_stats.query_time_ms 284 _model_server_stats.encode_time_ms 11 _model_server_stats.element_count 42 #