data_6VEJ # _model_server_result.job_id mcg_EIrPK1WFtihrA-J-3Q _model_server_result.datetime_utc '2024-12-21 18:54:11' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6vej # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"O","auth_seq_id":702}' # _entry.id 6VEJ # _exptl.entry_id 6VEJ _exptl.method 'ELECTRON MICROSCOPY' # _entity.details ? _entity.formula_weight 256.424 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'PALMITIC ACID' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6VEJ _cell.length_a 1 _cell.length_b 1 _cell.length_c 1 _cell.Z_PDB ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 6VEJ _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 K N N ? 5 M N N ? 5 O N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 D SG CYS 1 P CYS 1 1_555 J C41 E2V . P E2V 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.816 ? covale ? covale2 D N CYS 1 P CYS 1 1_555 K C1 PLM . P PLM 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.37 ? covale ? covale3 E SG CYS 1 Q CYS 1 1_555 L C41 E2V . Q E2V 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.815 ? covale ? covale4 E N CYS 1 Q CYS 1 1_555 M C1 PLM . Q PLM 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.37 ? covale ? covale5 F SG CYS 1 R CYS 1 1_555 N C41 E2V . R E2V 701 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.816 ? covale ? covale6 F N CYS 1 R CYS 1 1_555 O C1 PLM . R PLM 702 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.37 ? # _chem_comp.formula 'C16 H32 O2' _chem_comp.formula_weight 256.424 _chem_comp.id PLM _chem_comp.mon_nstd_flag . _chem_comp.name 'PALMITIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C1 O1 PLM sing 455 n n C1 O2 PLM doub 456 n n C1 C2 PLM sing 457 n n O1 H PLM sing 458 n n C2 C3 PLM sing 459 n n C2 H21 PLM sing 460 n n C2 H22 PLM sing 461 n n C3 C4 PLM sing 462 n n C3 H31 PLM sing 463 n n C3 H32 PLM sing 464 n n C4 C5 PLM sing 465 n n C4 H41 PLM sing 466 n n C4 H42 PLM sing 467 n n C5 C6 PLM sing 468 n n C5 H51 PLM sing 469 n n C5 H52 PLM sing 470 n n C6 C7 PLM sing 471 n n C6 H61 PLM sing 472 n n C6 H62 PLM sing 473 n n C7 C8 PLM sing 474 n n C7 H71 PLM sing 475 n n C7 H72 PLM sing 476 n n C8 C9 PLM sing 477 n n C8 H81 PLM sing 478 n n C8 H82 PLM sing 479 n n C9 CA PLM sing 480 n n C9 H91 PLM sing 481 n n C9 H92 PLM sing 482 n n CA CB PLM sing 483 n n CA HA1 PLM sing 484 n n CA HA2 PLM sing 485 n n CB CC PLM sing 486 n n CB HB1 PLM sing 487 n n CB HB2 PLM sing 488 n n CC CD PLM sing 489 n n CC HC1 PLM sing 490 n n CC HC2 PLM sing 491 n n CD CE PLM sing 492 n n CD HD1 PLM sing 493 n n CD HD2 PLM sing 494 n n CE CF PLM sing 495 n n CE HE1 PLM sing 496 n n CE HE2 PLM sing 497 n n CF CG PLM sing 498 n n CF HF1 PLM sing 499 n n CF HF2 PLM sing 500 n n CG HG1 PLM sing 501 n n CG HG2 PLM sing 502 n n CG HG3 PLM sing 503 n n # _atom_sites.entry_id 6VEJ _atom_sites.fract_transf_matrix[1][1] 1 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 1 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 1 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 3 LMU A 1 1101 1050 LMU DMJ . H 3 LMU B 1 1101 1050 LMU DMJ . I 3 LMU C 1 1101 1050 LMU DMJ . J 4 E2V P 1 701 1034 E2V BPL . K 5 PLM P 1 702 1035 PLM CBG . L 4 E2V Q 1 701 1034 E2V BPL . M 5 PLM Q 1 702 1035 PLM CBG . N 4 E2V R 1 701 1034 E2V BPL . O 5 PLM R 1 702 1035 PLM CBG . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 PLM . . . O 5 125.052 160.333 108.734 1 173.78 ? C1 PLM 702 R 1 HETATM 2 O O2 PLM . . . O 5 125.234 159.257 108.217 1 173.78 ? O2 PLM 702 R 1 HETATM 3 C C2 PLM . . . O 5 126.168 161.117 109.38 1 173.78 ? C2 PLM 702 R 1 HETATM 4 C C3 PLM . . . O 5 127.357 161.413 108.476 1 173.78 ? C3 PLM 702 R 1 HETATM 5 C C4 PLM . . . O 5 128.598 161.858 109.237 1 173.78 ? C4 PLM 702 R 1 HETATM 6 C C5 PLM . . . O 5 129.568 160.729 109.562 1 173.78 ? C5 PLM 702 R 1 HETATM 7 C C6 PLM . . . O 5 130.775 161.206 110.36 1 173.78 ? C6 PLM 702 R 1 HETATM 8 C C7 PLM . . . O 5 131.512 160.115 111.128 1 173.78 ? C7 PLM 702 R 1 HETATM 9 C C8 PLM . . . O 5 130.859 159.73 112.447 1 173.78 ? C8 PLM 702 R 1 HETATM 10 C C9 PLM . . . O 5 131.747 158.872 113.34 1 173.78 ? C9 PLM 702 R 1 HETATM 11 C CA PLM . . . O 5 131.549 159.112 114.83 1 173.78 ? CA PLM 702 R 1 HETATM 12 C CB PLM . . . O 5 132.69 158.599 115.698 1 173.78 ? CB PLM 702 R 1 HETATM 13 C CC PLM . . . O 5 133.029 159.527 116.858 1 173.78 ? CC PLM 702 R 1 HETATM 14 C CD PLM . . . O 5 134.344 159.186 117.546 1 173.78 ? CD PLM 702 R 1 HETATM 15 C CE PLM . . . O 5 134.699 160.166 118.656 1 173.78 ? CE PLM 702 R 1 HETATM 16 C CF PLM . . . O 5 136.076 159.905 119.253 1 173.78 ? CF PLM 702 R 1 HETATM 17 C CG PLM . . . O 5 136.411 160.817 120.426 1 173.78 ? CG PLM 702 R 1 # _model_server_stats.io_time_ms 66 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 32 _model_server_stats.query_time_ms 276 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 17 #