data_6VGI # _model_server_result.job_id 7ysIwrQtZInpyH4tffBvAg _model_server_result.datetime_utc '2024-12-27 01:10:23' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6vgi # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"H","auth_seq_id":202}' # _entry.id 6VGI # _exptl.entry_id 6VGI _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 5 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 101.53 _cell.angle_gamma 90 _cell.entry_id 6VGI _cell.length_a 214.418 _cell.length_b 66.297 _cell.length_c 109.43 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6VGI _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'C 1 2 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA trimeric 3 author_and_software_defined_assembly 1 PISA trimeric 3 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,E,F,G,H,N,O,P,Q,R,V,W 1 1 B,C,D,I,J,K,L,M,S,T,U 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 3 H N N ? 3 K N N ? 3 M N N ? 3 O N N ? 3 Q N N # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 358 n n S O2 SO4 doub 359 n n S O3 SO4 sing 360 n n S O4 SO4 sing 361 n n # _atom_sites.entry_id 6VGI _atom_sites.fract_transf_matrix[1][1] 0.004664 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000952 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015084 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009327 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code G 2 QY7 A 1 201 6 QY7 SX1 . H 3 SO4 A 1 202 5 SO4 SO4 . I 2 QY7 B 1 201 2 QY7 SX1 . J 2 QY7 B 1 202 4 QY7 SX1 . K 3 SO4 B 1 203 4 SO4 SO4 . L 2 QY7 C 1 201 3 QY7 SX1 . M 3 SO4 C 1 202 1 SO4 SO4 . N 2 QY7 E 1 201 1 QY7 SX1 . O 3 SO4 E 1 202 2 SO4 SO4 . P 2 QY7 F 1 201 5 QY7 SX1 . Q 3 SO4 F 1 202 3 SO4 SO4 . R 4 HOH A 1 301 3 HOH HOH . R 4 HOH A 2 302 10 HOH HOH . R 4 HOH A 3 303 23 HOH HOH . R 4 HOH A 4 304 24 HOH HOH . R 4 HOH A 5 305 28 HOH HOH . S 4 HOH B 1 301 6 HOH HOH . S 4 HOH B 2 302 5 HOH HOH . S 4 HOH B 3 303 27 HOH HOH . S 4 HOH B 4 304 26 HOH HOH . S 4 HOH B 5 305 15 HOH HOH . T 4 HOH C 1 301 25 HOH HOH . T 4 HOH C 2 302 9 HOH HOH . T 4 HOH C 3 303 7 HOH HOH . T 4 HOH C 4 304 14 HOH HOH . U 4 HOH D 1 201 20 HOH HOH . U 4 HOH D 2 202 2 HOH HOH . U 4 HOH D 3 203 4 HOH HOH . U 4 HOH D 4 204 18 HOH HOH . U 4 HOH D 5 205 22 HOH HOH . V 4 HOH E 1 301 8 HOH HOH . V 4 HOH E 2 302 12 HOH HOH . V 4 HOH E 3 303 16 HOH HOH . V 4 HOH E 4 304 1 HOH HOH . V 4 HOH E 5 305 13 HOH HOH . V 4 HOH E 6 306 17 HOH HOH . V 4 HOH E 7 307 19 HOH HOH . W 4 HOH F 1 301 11 HOH HOH . W 4 HOH F 2 302 21 HOH HOH . W 4 HOH F 3 303 29 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . H 3 -94.379 -0.251 20.067 1 93.2 ? S SO4 202 A 1 HETATM 2 O O1 SO4 . . . H 3 -94.685 1.038 19.453 1 92.86 ? O1 SO4 202 A 1 HETATM 3 O O2 SO4 . . . H 3 -94.801 -1.329 19.178 1 96.48 ? O2 SO4 202 A 1 HETATM 4 O O3 SO4 . . . H 3 -95.091 -0.368 21.336 1 94.74 ? O3 SO4 202 A 1 HETATM 5 O O4 SO4 . . . H 3 -92.941 -0.356 20.298 1 93.44 ? O4 SO4 202 A 1 # _model_server_stats.io_time_ms 17 _model_server_stats.parse_time_ms 17 _model_server_stats.create_model_time_ms 30 _model_server_stats.query_time_ms 439 _model_server_stats.encode_time_ms 13 _model_server_stats.element_count 5 #