data_6VH1 # _model_server_result.job_id qLDxLJjBrWGjrj-Tznt9Kg _model_server_result.datetime_utc '2024-11-05 11:27:34' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6vh1 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":401}' # _entry.id 6VH1 # _exptl.entry_id 6VH1 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 433.49 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N~2~-{[(4,4-difluorocyclohexyl)oxy]carbonyl}-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-L-leucinamide _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6VH1 _cell.length_a 76.063 _cell.length_b 91.241 _cell.length_c 100.352 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6VH1 _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A SG CYS 155 A CYS 148 1_555 C C25 QZ7 . A QZ7 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.813 ? covale ? covale2 B SG CYS 155 B CYS 148 1_555 D C25 QZ7 . B QZ7 401 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.807 ? # _chem_comp.formula 'C20 H33 F2 N3 O5' _chem_comp.formula_weight 433.49 _chem_comp.id QZ7 _chem_comp.mon_nstd_flag . _chem_comp.name N~2~-{[(4,4-difluorocyclohexyl)oxy]carbonyl}-N-{(2S)-1-hydroxy-3-[(3S)-2-oxopyrrolidin-3-yl]propan-2-yl}-L-leucinamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C22 C23 QZ7 sing 277 n n C22 N21 QZ7 sing 278 n n C23 C19 QZ7 sing 279 n n O26 C25 QZ7 sing 280 n n O27 C15 QZ7 doub 281 n n F03 C02 QZ7 sing 282 n n N21 C20 QZ7 sing 283 n n C25 C17 QZ7 sing 284 n n C17 C18 QZ7 sing 285 n n C17 N16 QZ7 sing 286 n n C04 C05 QZ7 sing 287 n n C04 C02 QZ7 sing 288 n n C19 C18 QZ7 sing 289 n n C19 C20 QZ7 sing 290 n n C15 N16 QZ7 sing 291 n n C15 C10 QZ7 sing 292 n n C05 C06 QZ7 sing 293 n n C02 F01 QZ7 sing 294 n n C02 C30 QZ7 sing 295 n n C20 O24 QZ7 doub 296 n n N09 C10 QZ7 sing 297 n n N09 C08 QZ7 sing 298 n n C11 C10 QZ7 sing 299 n n C11 C12 QZ7 sing 300 n n O07 C08 QZ7 sing 301 n n O07 C06 QZ7 sing 302 n n C08 O28 QZ7 doub 303 n n C06 C29 QZ7 sing 304 n n C30 C29 QZ7 sing 305 n n C14 C12 QZ7 sing 306 n n C12 C13 QZ7 sing 307 n n C04 H1 QZ7 sing 308 n n C04 H2 QZ7 sing 309 n n C05 H3 QZ7 sing 310 n n C05 H4 QZ7 sing 311 n n C06 H5 QZ7 sing 312 n n C10 H6 QZ7 sing 313 n n C11 H7 QZ7 sing 314 n n C11 H8 QZ7 sing 315 n n C12 H9 QZ7 sing 316 n n C13 H10 QZ7 sing 317 n n C13 H11 QZ7 sing 318 n n C13 H12 QZ7 sing 319 n n C14 H13 QZ7 sing 320 n n C14 H14 QZ7 sing 321 n n C14 H15 QZ7 sing 322 n n C17 H16 QZ7 sing 323 n n C18 H17 QZ7 sing 324 n n C18 H18 QZ7 sing 325 n n C19 H19 QZ7 sing 326 n n C22 H20 QZ7 sing 327 n n C22 H21 QZ7 sing 328 n n C23 H22 QZ7 sing 329 n n C23 H23 QZ7 sing 330 n n C25 H24 QZ7 sing 331 n n C25 H25 QZ7 sing 332 n n C29 H26 QZ7 sing 333 n n C29 H27 QZ7 sing 334 n n C30 H28 QZ7 sing 335 n n C30 H29 QZ7 sing 336 n n N09 H30 QZ7 sing 337 n n N16 H31 QZ7 sing 338 n n N21 H32 QZ7 sing 339 n n O26 H33 QZ7 sing 340 n n # _atom_sites.entry_id 6VH1 _atom_sites.fract_transf_matrix[1][1] 0.013147 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.01096 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009965 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 QZ7 A 1 401 1 QZ7 A03 . D 2 QZ7 B 1 401 2 QZ7 A03 . E 3 HOH A 1 501 47 HOH HOH . E 3 HOH A 2 502 30 HOH HOH . E 3 HOH A 3 503 40 HOH HOH . E 3 HOH A 4 504 35 HOH HOH . E 3 HOH A 5 505 18 HOH HOH . E 3 HOH A 6 506 10 HOH HOH . E 3 HOH A 7 507 32 HOH HOH . E 3 HOH A 8 508 70 HOH HOH . E 3 HOH A 9 509 38 HOH HOH . E 3 HOH A 10 510 13 HOH HOH . E 3 HOH A 11 511 46 HOH HOH . E 3 HOH A 12 512 31 HOH HOH . E 3 HOH A 13 513 52 HOH HOH . E 3 HOH A 14 514 4 HOH HOH . E 3 HOH A 15 515 37 HOH HOH . E 3 HOH A 16 516 72 HOH HOH . E 3 HOH A 17 517 68 HOH HOH . E 3 HOH A 18 518 15 HOH HOH . E 3 HOH A 19 519 5 HOH HOH . E 3 HOH A 20 520 9 HOH HOH . E 3 HOH A 21 521 45 HOH HOH . E 3 HOH A 22 522 79 HOH HOH . F 3 HOH B 1 501 29 HOH HOH . F 3 HOH B 2 502 54 HOH HOH . F 3 HOH B 3 503 63 HOH HOH . F 3 HOH B 4 504 42 HOH HOH . F 3 HOH B 5 505 22 HOH HOH . F 3 HOH B 6 506 23 HOH HOH . F 3 HOH B 7 507 65 HOH HOH . F 3 HOH B 8 508 33 HOH HOH . F 3 HOH B 9 509 57 HOH HOH . F 3 HOH B 10 510 66 HOH HOH . F 3 HOH B 11 511 7 HOH HOH . F 3 HOH B 12 512 14 HOH HOH . F 3 HOH B 13 513 12 HOH HOH . F 3 HOH B 14 514 50 HOH HOH . F 3 HOH B 15 515 75 HOH HOH . F 3 HOH B 16 516 1 HOH HOH . F 3 HOH B 17 517 60 HOH HOH . F 3 HOH B 18 518 39 HOH HOH . F 3 HOH B 19 519 61 HOH HOH . F 3 HOH B 20 520 69 HOH HOH . F 3 HOH B 21 521 21 HOH HOH . F 3 HOH B 22 522 64 HOH HOH . F 3 HOH B 23 523 71 HOH HOH . F 3 HOH B 24 524 26 HOH HOH . F 3 HOH B 25 525 8 HOH HOH . F 3 HOH B 26 526 41 HOH HOH . F 3 HOH B 27 527 25 HOH HOH . F 3 HOH B 28 528 73 HOH HOH . F 3 HOH B 29 529 19 HOH HOH . F 3 HOH B 30 530 2 HOH HOH . F 3 HOH B 31 531 58 HOH HOH . F 3 HOH B 32 532 48 HOH HOH . F 3 HOH B 33 533 20 HOH HOH . F 3 HOH B 34 534 6 HOH HOH . F 3 HOH B 35 535 24 HOH HOH . F 3 HOH B 36 536 51 HOH HOH . F 3 HOH B 37 537 11 HOH HOH . F 3 HOH B 38 538 34 HOH HOH . F 3 HOH B 39 539 44 HOH HOH . F 3 HOH B 40 540 76 HOH HOH . F 3 HOH B 41 541 55 HOH HOH . F 3 HOH B 42 542 17 HOH HOH . F 3 HOH B 43 543 62 HOH HOH . F 3 HOH B 44 544 36 HOH HOH . F 3 HOH B 45 545 59 HOH HOH . F 3 HOH B 46 546 56 HOH HOH . F 3 HOH B 47 547 43 HOH HOH . F 3 HOH B 48 548 74 HOH HOH . F 3 HOH B 49 549 67 HOH HOH . F 3 HOH B 50 550 27 HOH HOH . F 3 HOH B 51 551 53 HOH HOH . F 3 HOH B 52 552 77 HOH HOH . F 3 HOH B 53 553 16 HOH HOH . F 3 HOH B 54 554 3 HOH HOH . F 3 HOH B 55 555 78 HOH HOH . F 3 HOH B 56 556 49 HOH HOH . F 3 HOH B 57 557 80 HOH HOH . F 3 HOH B 58 558 28 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C02 QZ7 . . . C 2 60.851 -16.895 -9.409 1 92.35 ? C02 QZ7 401 A 1 HETATM 2 C C04 QZ7 . . . C 2 60.516 -15.429 -9.898 1 76.39 ? C04 QZ7 401 A 1 HETATM 3 C C05 QZ7 . . . C 2 61.627 -14.445 -9.708 1 70.03 ? C05 QZ7 401 A 1 HETATM 4 C C06 QZ7 . . . C 2 62.36 -14.476 -8.313 1 71.09 ? C06 QZ7 401 A 1 HETATM 5 C C08 QZ7 . . . C 2 63.054 -12.288 -8.409 1 62.26 ? C08 QZ7 401 A 1 HETATM 6 C C10 QZ7 . . . C 2 63.868 -10.149 -8.698 1 58.1 ? C10 QZ7 401 A 1 HETATM 7 C C11 QZ7 . . . C 2 65.242 -9.557 -8.77 1 60.14 ? C11 QZ7 401 A 1 HETATM 8 C C12 QZ7 . . . C 2 66.16 -9.915 -7.578 1 61.65 ? C12 QZ7 401 A 1 HETATM 9 C C13 QZ7 . . . C 2 65.629 -9.327 -6.255 1 60.76 ? C13 QZ7 401 A 1 HETATM 10 C C14 QZ7 . . . C 2 67.545 -9.366 -7.766 1 55.53 ? C14 QZ7 401 A 1 HETATM 11 C C15 QZ7 . . . C 2 62.958 -9.465 -9.708 1 57.36 ? C15 QZ7 401 A 1 HETATM 12 C C17 QZ7 . . . C 2 61.121 -7.905 -10.147 1 54.87 ? C17 QZ7 401 A 1 HETATM 13 C C18 QZ7 . . . C 2 59.684 -8.204 -9.635 1 49.84 ? C18 QZ7 401 A 1 HETATM 14 C C19 QZ7 . . . C 2 59.294 -9.668 -9.82 1 46.19 ? C19 QZ7 401 A 1 HETATM 15 C C20 QZ7 . . . C 2 57.917 -9.943 -9.338 1 42.8 ? C20 QZ7 401 A 1 HETATM 16 C C22 QZ7 . . . C 2 58.104 -11.11 -11.351 1 43.75 ? C22 QZ7 401 A 1 HETATM 17 C C23 QZ7 . . . C 2 59.237 -10.128 -11.281 1 45.24 ? C23 QZ7 401 A 1 HETATM 18 C C25 QZ7 . . . C 2 61.474 -6.393 -10.196 1 44.16 ? C25 QZ7 401 A 1 HETATM 19 C C29 QZ7 . . . C 2 62.746 -15.868 -7.891 1 74.33 ? C29 QZ7 401 A 1 HETATM 20 C C30 QZ7 . . . C 2 61.709 -16.974 -8.069 1 92.18 ? C30 QZ7 401 A 1 HETATM 21 F F01 QZ7 . . . C 2 59.69 -17.601 -9.228 1 90.29 ? F01 QZ7 401 A 1 HETATM 22 F F03 QZ7 . . . C 2 61.465 -17.568 -10.439 1 90.6 ? F03 QZ7 401 A 1 HETATM 23 N N09 QZ7 . . . C 2 63.883 -11.497 -9.027 1 61.15 ? N09 QZ7 401 A 1 HETATM 24 N N16 QZ7 . . . C 2 62.047 -8.583 -9.256 1 55.63 ? N16 QZ7 401 A 1 HETATM 25 N N21 QZ7 . . . C 2 57.265 -10.778 -10.222 1 44.9 ? N21 QZ7 401 A 1 HETATM 26 O O07 QZ7 . . . C 2 63.402 -13.596 -8.439 1 75.66 ? O07 QZ7 401 A 1 HETATM 27 O O24 QZ7 . . . C 2 57.402 -9.556 -8.307 1 44.51 ? O24 QZ7 401 A 1 HETATM 28 O O26 QZ7 . . . C 2 60.45 -5.802 -11.037 1 51.99 ? O26 QZ7 401 A 1 HETATM 29 O O27 QZ7 . . . C 2 63.018 -9.741 -10.9 1 55.4 ? O27 QZ7 401 A 1 HETATM 30 O O28 QZ7 . . . C 2 62.057 -11.894 -7.822 1 55.91 ? O28 QZ7 401 A 1 # _model_server_stats.io_time_ms 12 _model_server_stats.parse_time_ms 14 _model_server_stats.create_model_time_ms 22 _model_server_stats.query_time_ms 341 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 30 #