data_6VH4 # _model_server_result.job_id hyoy3mbwZp3WH1XpobwBRg _model_server_result.datetime_utc '2025-07-14 09:19:06' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6vh4 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1101}' # _entry.id 6VH4 # _exptl.entry_id 6VH4 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 489.541 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[3-({4-[4-(4-fluorophenyl)-2-(3-hydroxypropyl)-1H-imidazol-5-yl]pyridin-2-yl}amino)-4-methoxyphenyl]propanamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6VH4 _cell.length_a 146.534 _cell.length_b 146.534 _cell.length_c 146.534 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6VH4 _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 102 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 797 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C35 _struct_conn.ptnr2_label_comp_id QQM _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id QQM _struct_conn.ptnr2_auth_seq_id 1101 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.861 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C27 H28 F N5 O3' _chem_comp.formula_weight 489.541 _chem_comp.id QQM _chem_comp.mon_nstd_flag . _chem_comp.name N-[3-({4-[4-(4-fluorophenyl)-2-(3-hydroxypropyl)-1H-imidazol-5-yl]pyridin-2-yl}amino)-4-methoxyphenyl]propanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag F36 C07 QQM sing 277 n n C31 O06 QQM sing 278 n n N08 C25 QQM doub 279 n y N08 C21 QQM sing 280 n y C25 C24 QQM sing 281 n y O06 C28 QQM sing 282 n n C10 C07 QQM doub 283 n y C10 C12 QQM sing 284 n y C07 C04 QQM sing 285 n y N11 C21 QQM sing 286 n n N11 C29 QQM sing 287 n n C21 C22 QQM doub 288 n y C24 C23 QQM doub 289 n y C12 C14 QQM doub 290 n y C28 C29 QQM doub 291 n y C28 C27 QQM sing 292 n y C04 C01 QQM doub 293 n y C29 C32 QQM sing 294 n y C22 C23 QQM sing 295 n y C23 C16 QQM sing 296 n n C27 C26 QQM doub 297 n y C14 C01 QQM sing 298 n y C14 C15 QQM sing 299 n n C32 C30 QQM doub 300 n y C16 C15 QQM doub 301 n y C16 N02 QQM sing 302 n y C15 N05 QQM sing 303 n y C26 C30 QQM sing 304 n y C30 N13 QQM sing 305 n n N02 C17 QQM sing 306 n y N05 C17 QQM doub 307 n y C17 C18 QQM sing 308 n n O09 C33 QQM doub 309 n n N13 C33 QQM sing 310 n n C33 C34 QQM sing 311 n n C18 C19 QQM sing 312 n n C34 C35 QQM sing 313 n n C19 C20 QQM sing 314 n n C20 O03 QQM sing 315 n n C10 H1 QQM sing 316 n n C01 H2 QQM sing 317 n n C04 H3 QQM sing 318 n n C12 H4 QQM sing 319 n n C18 H5 QQM sing 320 n n C18 H6 QQM sing 321 n n C19 H7 QQM sing 322 n n C19 H8 QQM sing 323 n n C20 H9 QQM sing 324 n n C20 H10 QQM sing 325 n n C22 H11 QQM sing 326 n n C24 H12 QQM sing 327 n n C25 H13 QQM sing 328 n n C26 H14 QQM sing 329 n n C27 H15 QQM sing 330 n n C31 H16 QQM sing 331 n n C31 H17 QQM sing 332 n n C31 H18 QQM sing 333 n n C32 H19 QQM sing 334 n n C34 H20 QQM sing 335 n n C34 H21 QQM sing 336 n n C35 H22 QQM sing 337 n n C35 H23 QQM sing 338 n n C35 H24 QQM sing 339 n n N02 H25 QQM sing 340 n n N11 H27 QQM sing 341 n n N13 H28 QQM sing 342 n n O03 H29 QQM sing 343 n n # _atom_sites.entry_id 6VH4 _atom_sites.fract_transf_matrix[1][1] 0.006824 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006824 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006824 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 QQM A 1 1101 1101 QQM L03 . C 3 HOH A 1 1201 13 HOH HOH . C 3 HOH A 2 1202 5 HOH HOH . C 3 HOH A 3 1203 14 HOH HOH . C 3 HOH A 4 1204 30 HOH HOH . C 3 HOH A 5 1205 17 HOH HOH . C 3 HOH A 6 1206 7 HOH HOH . C 3 HOH A 7 1207 3 HOH HOH . C 3 HOH A 8 1208 12 HOH HOH . C 3 HOH A 9 1209 32 HOH HOH . C 3 HOH A 10 1210 6 HOH HOH . C 3 HOH A 11 1211 23 HOH HOH . C 3 HOH A 12 1212 4 HOH HOH . C 3 HOH A 13 1213 26 HOH HOH . C 3 HOH A 14 1214 8 HOH HOH . C 3 HOH A 15 1215 15 HOH HOH . C 3 HOH A 16 1216 9 HOH HOH . C 3 HOH A 17 1217 29 HOH HOH . C 3 HOH A 18 1218 11 HOH HOH . C 3 HOH A 19 1219 16 HOH HOH . C 3 HOH A 20 1220 1 HOH HOH . C 3 HOH A 21 1221 20 HOH HOH . C 3 HOH A 22 1222 19 HOH HOH . C 3 HOH A 23 1223 10 HOH HOH . C 3 HOH A 24 1224 2 HOH HOH . C 3 HOH A 25 1225 27 HOH HOH . C 3 HOH A 26 1226 21 HOH HOH . C 3 HOH A 27 1227 22 HOH HOH . C 3 HOH A 28 1228 28 HOH HOH . C 3 HOH A 29 1229 24 HOH HOH . C 3 HOH A 30 1230 31 HOH HOH . C 3 HOH A 31 1231 25 HOH HOH . C 3 HOH A 32 1232 18 HOH HOH . C 3 HOH A 33 1233 33 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C10 QQM . . . B 2 -52.341 -2.513 27.392 1 65.22 ? C10 QQM 1101 A 1 HETATM 2 C C14 QQM . . . B 2 -52.197 -0.016 26.497 1 62.19 ? C14 QQM 1101 A 1 HETATM 3 C C01 QQM . . . B 2 -52.931 0.477 27.759 1 64.31 ? C01 QQM 1101 A 1 HETATM 4 C C04 QQM . . . B 2 -53.364 -0.518 28.833 1 56.55 ? C04 QQM 1101 A 1 HETATM 5 C C07 QQM . . . B 2 -53.069 -2.018 28.651 1 60.73 ? C07 QQM 1101 A 1 HETATM 6 C C12 QQM . . . B 2 -51.903 -1.51 26.313 1 64.82 ? C12 QQM 1101 A 1 HETATM 7 C C15 QQM . . . B 2 -51.764 1.038 25.395 1 67.88 ? C15 QQM 1101 A 1 HETATM 8 C C16 QQM . . . B 2 -52.182 1.074 24.067 1 64.67 ? C16 QQM 1101 A 1 HETATM 9 C C17 QQM . . . B 2 -50.812 2.754 24.392 1 86.43 ? C17 QQM 1101 A 1 HETATM 10 C C18 QQM . . . B 2 -49.968 3.997 24.147 1 102.36 ? C18 QQM 1101 A 1 HETATM 11 C C19 QQM . . . B 2 -50.822 5.285 24.475 1 81.45 ? C19 QQM 1101 A 1 HETATM 12 C C20 QQM . . . B 2 -50.748 6.255 23.29 1 78.49 ? C20 QQM 1101 A 1 HETATM 13 C C21 QQM . . . B 2 -53.932 -0.928 21.041 1 54.04 ? C21 QQM 1101 A 1 HETATM 14 C C22 QQM . . . B 2 -53.023 -0.013 21.845 1 56.22 ? C22 QQM 1101 A 1 HETATM 15 C C23 QQM . . . B 2 -53.156 0.102 23.326 1 58.2 ? C23 QQM 1101 A 1 HETATM 16 C C24 QQM . . . B 2 -54.207 -0.699 24.042 1 56.57 ? C24 QQM 1101 A 1 HETATM 17 C C25 QQM . . . B 2 -55.121 -1.619 23.242 1 52.39 ? C25 QQM 1101 A 1 HETATM 18 C C26 QQM . . . B 2 -50.78 1.065 16.877 1 59.49 ? C26 QQM 1101 A 1 HETATM 19 C C27 QQM . . . B 2 -51.199 -0.4 16.581 1 54.43 ? C27 QQM 1101 A 1 HETATM 20 C C28 QQM . . . B 2 -52.226 -1.101 17.489 1 54.57 ? C28 QQM 1101 A 1 HETATM 21 C C29 QQM . . . B 2 -52.839 -0.35 18.7 1 54.34 ? C29 QQM 1101 A 1 HETATM 22 C C30 QQM . . . B 2 -51.381 1.803 18.061 1 50.1 ? C30 QQM 1101 A 1 HETATM 23 C C31 QQM . . . B 2 -52.543 -2.844 15.774 1 63.08 ? C31 QQM 1101 A 1 HETATM 24 C C32 QQM . . . B 2 -52.422 1.08 18.967 1 56.63 ? C32 QQM 1101 A 1 HETATM 25 C C33 QQM . . . B 2 -50.945 3.851 19.62 1 63.56 ? C33 QQM 1101 A 1 HETATM 26 C C34 QQM . . . B 2 -50.471 5.314 19.74 1 60.15 ? C34 QQM 1101 A 1 HETATM 27 C C35 QQM . . . B 2 -51.228 6.171 18.796 1 60.68 ? C35 QQM 1101 A 1 HETATM 28 F F36 QQM . . . B 2 -53.469 -2.928 29.635 1 75.91 ? F36 QQM 1101 A 1 HETATM 29 N N02 QQM . . . B 2 -51.588 2.132 23.475 1 71.53 ? N02 QQM 1101 A 1 HETATM 30 N N05 QQM . . . B 2 -50.933 2.063 25.589 1 87.51 ? N05 QQM 1101 A 1 HETATM 31 N N08 QQM . . . B 2 -54.976 -1.724 21.766 1 44.81 ? N08 QQM 1101 A 1 HETATM 32 N N11 QQM . . . B 2 -53.808 -1.051 19.522 1 53.83 ? N11 QQM 1101 A 1 HETATM 33 N N13 QQM . . . B 2 -50.951 3.216 18.311 1 52.48 ? N13 QQM 1101 A 1 HETATM 34 O O03 QQM . . . B 2 -50.475 7.56 23.777 1 78.52 ? O03 QQM 1101 A 1 HETATM 35 O O06 QQM . . . B 2 -52.621 -2.461 17.22 1 48.5 ? O06 QQM 1101 A 1 HETATM 36 O O09 QQM . . . B 2 -51.303 3.261 20.618 1 83.4 ? O09 QQM 1101 A 1 # _model_server_stats.io_time_ms 63 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 5 _model_server_stats.query_time_ms 253 _model_server_stats.encode_time_ms 3 _model_server_stats.element_count 36 #