data_6VH5
#
_model_server_result.job_id            pWwiW1IueGXK1t0mw4On0w 
_model_server_result.datetime_utc      '2025-09-04 15:24:06' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6vh5 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"L","auth_seq_id":301}' 
#
_entry.id    6VH5 
#
_exptl.entry_id    6VH5 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              165.189 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            PHENYLALANINE 
_entity.pdbx_number_of_molecules    4 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          112.95 
_cell.angle_gamma         90 
_cell.entry_id            6VH5 
_cell.length_a            226.95 
_cell.length_b            61.25 
_cell.length_c            120.05 
_cell.Z_PDB               16 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6VH5 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        5 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'C 1 2 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA dimeric 2 author_and_software_defined_assembly 1 
PISA dimeric 2 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E,F,J,K,O,Q 1 1 
B,D,G,H,I,L,M,N,P,R 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 E N N 
? 2 G N N 
? 2 J N N 
? 2 L N N 
#
_chem_comp.formula           'C9 H11 N O2' 
_chem_comp.formula_weight    165.189 
_chem_comp.id                PHE 
_chem_comp.mon_nstd_flag     y 
_chem_comp.name              PHENYLALANINE 
_chem_comp.type              'l-peptide linking' 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N CA PHE sing 246 n n 
N H PHE sing 247 n n 
N H2 PHE sing 248 n n 
CA C PHE sing 249 n n 
CA CB PHE sing 250 n n 
CA HA PHE sing 251 n n 
C O PHE doub 252 n n 
C OXT PHE sing 253 n n 
CB CG PHE sing 254 n n 
CB HB2 PHE sing 255 n n 
CB HB3 PHE sing 256 n n 
CG CD1 PHE doub 257 n y 
CG CD2 PHE sing 258 n y 
CD1 CE1 PHE sing 259 n y 
CD1 HD1 PHE sing 260 n n 
CD2 CE2 PHE doub 261 n y 
CD2 HD2 PHE sing 262 n n 
CE1 CZ PHE doub 263 n y 
CE1 HE1 PHE sing 264 n n 
CE2 CZ PHE sing 265 n y 
CE2 HE2 PHE sing 266 n n 
CZ HZ PHE sing 267 n n 
OXT HXT PHE sing 268 n n 
#
_atom_sites.entry_id                     6VH5 
_atom_sites.fract_transf_matrix[1][1]    0.004406 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0.001866 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.016327 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.009046 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
E 2 PHE A 1 301 300 PHE PHE . 
F 3 EDO A 1 302 401 EDO EDO . 
G 2 PHE B 1 301 300 PHE PHE . 
H 3 EDO B 1 302 401 EDO EDO . 
I 3 EDO B 1 303 701 EDO EDO . 
J 2 PHE C 1 301 300 PHE PHE . 
K 3 EDO C 1 302 401 EDO EDO . 
L 2 PHE D 1 301 300 PHE PHE . 
M 3 EDO D 1 302 401 EDO EDO . 
N 3 EDO D 1 303 601 EDO EDO . 
O 4 HOH A 1 401 57 HOH HOH . 
O 4 HOH A 2 402 18 HOH HOH . 
O 4 HOH A 3 403 50 HOH HOH . 
O 4 HOH A 4 404 56 HOH HOH . 
O 4 HOH A 5 405 128 HOH HOH . 
O 4 HOH A 6 406 239 HOH HOH . 
O 4 HOH A 7 407 139 HOH HOH . 
O 4 HOH A 8 408 34 HOH HOH . 
O 4 HOH A 9 409 204 HOH HOH . 
O 4 HOH A 10 410 120 HOH HOH . 
O 4 HOH A 11 411 58 HOH HOH . 
O 4 HOH A 12 412 143 HOH HOH . 
O 4 HOH A 13 413 127 HOH HOH . 
O 4 HOH A 14 414 23 HOH HOH . 
O 4 HOH A 15 415 121 HOH HOH . 
O 4 HOH A 16 416 138 HOH HOH . 
O 4 HOH A 17 417 117 HOH HOH . 
O 4 HOH A 18 418 125 HOH HOH . 
O 4 HOH A 19 419 191 HOH HOH . 
O 4 HOH A 20 420 63 HOH HOH . 
O 4 HOH A 21 421 41 HOH HOH . 
O 4 HOH A 22 422 187 HOH HOH . 
O 4 HOH A 23 423 25 HOH HOH . 
O 4 HOH A 24 424 31 HOH HOH . 
O 4 HOH A 25 425 131 HOH HOH . 
O 4 HOH A 26 426 129 HOH HOH . 
O 4 HOH A 27 427 61 HOH HOH . 
O 4 HOH A 28 428 194 HOH HOH . 
O 4 HOH A 29 429 123 HOH HOH . 
O 4 HOH A 30 430 54 HOH HOH . 
O 4 HOH A 31 431 193 HOH HOH . 
O 4 HOH A 32 432 62 HOH HOH . 
O 4 HOH A 33 433 202 HOH HOH . 
O 4 HOH A 34 434 44 HOH HOH . 
O 4 HOH A 35 435 134 HOH HOH . 
O 4 HOH A 36 436 190 HOH HOH . 
O 4 HOH A 37 437 126 HOH HOH . 
O 4 HOH A 38 438 166 HOH HOH . 
O 4 HOH A 39 439 189 HOH HOH . 
O 4 HOH A 40 440 64 HOH HOH . 
O 4 HOH A 41 441 144 HOH HOH . 
O 4 HOH A 42 442 146 HOH HOH . 
O 4 HOH A 43 443 55 HOH HOH . 
O 4 HOH A 44 444 203 HOH HOH . 
O 4 HOH A 45 445 130 HOH HOH . 
O 4 HOH A 46 446 137 HOH HOH . 
O 4 HOH A 47 447 53 HOH HOH . 
O 4 HOH A 48 448 198 HOH HOH . 
O 4 HOH A 49 449 145 HOH HOH . 
O 4 HOH A 50 450 118 HOH HOH . 
O 4 HOH A 51 451 65 HOH HOH . 
O 4 HOH A 52 452 119 HOH HOH . 
P 4 HOH B 1 401 147 HOH HOH . 
P 4 HOH B 2 402 12 HOH HOH . 
P 4 HOH B 3 403 79 HOH HOH . 
P 4 HOH B 4 404 85 HOH HOH . 
P 4 HOH B 5 405 80 HOH HOH . 
P 4 HOH B 6 406 148 HOH HOH . 
P 4 HOH B 7 407 212 HOH HOH . 
P 4 HOH B 8 408 156 HOH HOH . 
P 4 HOH B 9 409 82 HOH HOH . 
P 4 HOH B 10 410 66 HOH HOH . 
P 4 HOH B 11 411 151 HOH HOH . 
P 4 HOH B 12 412 35 HOH HOH . 
P 4 HOH B 13 413 15 HOH HOH . 
P 4 HOH B 14 414 77 HOH HOH . 
P 4 HOH B 15 415 17 HOH HOH . 
P 4 HOH B 16 416 83 HOH HOH . 
P 4 HOH B 17 417 67 HOH HOH . 
P 4 HOH B 18 418 8 HOH HOH . 
P 4 HOH B 19 419 216 HOH HOH . 
P 4 HOH B 20 420 217 HOH HOH . 
P 4 HOH B 21 421 70 HOH HOH . 
P 4 HOH B 22 422 211 HOH HOH . 
P 4 HOH B 23 423 235 HOH HOH . 
P 4 HOH B 24 424 208 HOH HOH . 
P 4 HOH B 25 425 242 HOH HOH . 
P 4 HOH B 26 426 214 HOH HOH . 
P 4 HOH B 27 427 74 HOH HOH . 
P 4 HOH B 28 428 200 HOH HOH . 
P 4 HOH B 29 429 49 HOH HOH . 
P 4 HOH B 30 430 76 HOH HOH . 
P 4 HOH B 31 431 150 HOH HOH . 
P 4 HOH B 32 432 209 HOH HOH . 
P 4 HOH B 33 433 240 HOH HOH . 
P 4 HOH B 34 434 28 HOH HOH . 
P 4 HOH B 35 435 68 HOH HOH . 
P 4 HOH B 36 436 243 HOH HOH . 
P 4 HOH B 37 437 205 HOH HOH . 
P 4 HOH B 38 438 71 HOH HOH . 
P 4 HOH B 39 439 81 HOH HOH . 
P 4 HOH B 40 440 69 HOH HOH . 
P 4 HOH B 41 441 73 HOH HOH . 
P 4 HOH B 42 442 75 HOH HOH . 
P 4 HOH B 43 443 213 HOH HOH . 
P 4 HOH B 44 444 215 HOH HOH . 
P 4 HOH B 45 445 84 HOH HOH . 
P 4 HOH B 46 446 155 HOH HOH . 
P 4 HOH B 47 447 253 HOH HOH . 
P 4 HOH B 48 448 72 HOH HOH . 
P 4 HOH B 49 449 241 HOH HOH . 
P 4 HOH B 50 450 207 HOH HOH . 
Q 4 HOH C 1 401 161 HOH HOH . 
Q 4 HOH C 2 402 170 HOH HOH . 
Q 4 HOH C 3 403 244 HOH HOH . 
Q 4 HOH C 4 404 218 HOH HOH . 
Q 4 HOH C 5 405 162 HOH HOH . 
Q 4 HOH C 6 406 167 HOH HOH . 
Q 4 HOH C 7 407 92 HOH HOH . 
Q 4 HOH C 8 408 225 HOH HOH . 
Q 4 HOH C 9 409 219 HOH HOH . 
Q 4 HOH C 10 410 98 HOH HOH . 
Q 4 HOH C 11 411 164 HOH HOH . 
Q 4 HOH C 12 412 94 HOH HOH . 
Q 4 HOH C 13 413 96 HOH HOH . 
Q 4 HOH C 14 414 97 HOH HOH . 
Q 4 HOH C 15 415 220 HOH HOH . 
Q 4 HOH C 16 416 160 HOH HOH . 
Q 4 HOH C 17 417 87 HOH HOH . 
Q 4 HOH C 18 418 254 HOH HOH . 
Q 4 HOH C 19 419 7 HOH HOH . 
Q 4 HOH C 20 420 43 HOH HOH . 
Q 4 HOH C 21 421 245 HOH HOH . 
Q 4 HOH C 22 422 89 HOH HOH . 
Q 4 HOH C 23 423 158 HOH HOH . 
Q 4 HOH C 24 424 86 HOH HOH . 
Q 4 HOH C 25 425 223 HOH HOH . 
Q 4 HOH C 26 426 249 HOH HOH . 
Q 4 HOH C 27 427 165 HOH HOH . 
Q 4 HOH C 28 428 251 HOH HOH . 
Q 4 HOH C 29 429 252 HOH HOH . 
R 4 HOH D 1 401 104 HOH HOH . 
R 4 HOH D 2 402 103 HOH HOH . 
R 4 HOH D 3 403 231 HOH HOH . 
R 4 HOH D 4 404 149 HOH HOH . 
R 4 HOH D 5 405 171 HOH HOH . 
R 4 HOH D 6 406 181 HOH HOH . 
R 4 HOH D 7 407 4 HOH HOH . 
R 4 HOH D 8 408 107 HOH HOH . 
R 4 HOH D 9 409 232 HOH HOH . 
R 4 HOH D 10 410 178 HOH HOH . 
R 4 HOH D 11 411 234 HOH HOH . 
R 4 HOH D 12 412 105 HOH HOH . 
R 4 HOH D 13 413 11 HOH HOH . 
R 4 HOH D 14 414 185 HOH HOH . 
R 4 HOH D 15 415 227 HOH HOH . 
R 4 HOH D 16 416 228 HOH HOH . 
R 4 HOH D 17 417 246 HOH HOH . 
R 4 HOH D 18 418 99 HOH HOH . 
R 4 HOH D 19 419 30 HOH HOH . 
R 4 HOH D 20 420 247 HOH HOH . 
R 4 HOH D 21 421 237 HOH HOH . 
R 4 HOH D 22 422 230 HOH HOH . 
R 4 HOH D 23 423 179 HOH HOH . 
R 4 HOH D 24 424 14 HOH HOH . 
R 4 HOH D 25 425 175 HOH HOH . 
R 4 HOH D 26 426 173 HOH HOH . 
R 4 HOH D 27 427 46 HOH HOH . 
R 4 HOH D 28 428 106 HOH HOH . 
R 4 HOH D 29 429 176 HOH HOH . 
R 4 HOH D 30 430 109 HOH HOH . 
R 4 HOH D 31 431 100 HOH HOH . 
R 4 HOH D 32 432 233 HOH HOH . 
R 4 HOH D 33 433 102 HOH HOH . 
R 4 HOH D 34 434 226 HOH HOH . 
R 4 HOH D 35 435 186 HOH HOH . 
R 4 HOH D 36 436 229 HOH HOH . 
R 4 HOH D 37 437 183 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 N N PHE . . . L 2 87.812 34.674 30.428 1 42.92 ? N PHE 301 D 1 
HETATM 2 C CA PHE . . . L 2 88.459 35.741 29.673 1 51.68 ? CA PHE 301 D 1 
HETATM 3 C C PHE . . . L 2 89.721 36.233 30.374 1 56.79 ? C PHE 301 D 1 
HETATM 4 O O PHE . . . L 2 90.396 37.152 29.904 1 55.95 ? O PHE 301 D 1 
HETATM 5 C CB PHE . . . L 2 87.498 36.909 29.448 1 42.91 ? CB PHE 301 D 1 
HETATM 6 C CG PHE . . . L 2 86.761 37.338 30.691 1 54.99 ? CG PHE 301 D 1 
HETATM 7 C CD1 PHE . . . L 2 85.437 36.974 30.884 1 53.45 ? CD1 PHE 301 D 1 
HETATM 8 C CD2 PHE . . . L 2 87.384 38.109 31.663 1 47.73 ? CD2 PHE 301 D 1 
HETATM 9 C CE1 PHE . . . L 2 84.747 37.369 32.029 1 48.42 ? CE1 PHE 301 D 1 
HETATM 10 C CE2 PHE . . . L 2 86.705 38.502 32.795 1 55.47 ? CE2 PHE 301 D 1 
HETATM 11 C CZ PHE . . . L 2 85.376 38.134 32.979 1 53.87 ? CZ PHE 301 D 1 
HETATM 12 O OXT PHE . . . L 2 90.077 35.727 31.435 1 61.48 ? OXT PHE 301 D 1 
#
_model_server_stats.io_time_ms              87 
_model_server_stats.parse_time_ms           12 
_model_server_stats.create_model_time_ms    11 
_model_server_stats.query_time_ms           341 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           12 
#