data_6VHG # _model_server_result.job_id ECMWar9mktJAt9tw-b6NtA _model_server_result.datetime_utc '2024-10-20 19:08:42' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6vhg # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1101}' # _entry.id 6VHG # _exptl.entry_id 6VHG _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 458.555 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 3-(3,4-dimethoxyphenyl)-N~5~-(1-methylpiperidin-4-yl)-6-phenylpyrazolo[1,5-a]pyrimidine-5,7-diamine _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6VHG _cell.length_a 97.815 _cell.length_b 97.815 _cell.length_c 143.963 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6VHG _symmetry.cell_setting ? _symmetry.Int_Tables_number 182 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 63 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C SER 202 A SER 904 1_555 A N PTR 203 A PTR 905 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.313 ? covale ? covale2 A C PTR 203 A PTR 905 1_555 A N VAL 204 A VAL 906 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.336 ? covale ? covale3 A C ILE 225 A ILE 927 1_555 A N PTR 226 A PTR 928 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.332 ? covale ? covale4 A C PTR 226 A PTR 928 1_555 A N THR 227 A THR 929 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.334 ? # _chem_comp.formula 'C26 H30 N6 O2' _chem_comp.formula_weight 458.555 _chem_comp.id QX1 _chem_comp.mon_nstd_flag . _chem_comp.name 3-(3,4-dimethoxyphenyl)-N~5~-(1-methylpiperidin-4-yl)-6-phenylpyrazolo[1,5-a]pyrimidine-5,7-diamine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C26 O24 QX1 sing 312 n n C15 C14 QX1 doub 313 n y C15 C16 QX1 sing 314 n y C33 C32 QX1 sing 315 n n C33 C28 QX1 sing 316 n n C14 C13 QX1 sing 317 n y C32 N31 QX1 sing 318 n n O24 C20 QX1 sing 319 n n N11 C28 QX1 sing 320 n n N11 C4 QX1 sing 321 n n C16 C17 QX1 doub 322 n y C28 C29 QX1 sing 323 n n C20 C19 QX1 doub 324 n y C20 C21 QX1 sing 325 n y O25 C21 QX1 sing 326 n n O25 C27 QX1 sing 327 n n C4 N3 QX1 doub 328 n y C4 C5 QX1 sing 329 n y C19 C12 QX1 sing 330 n y C13 C5 QX1 sing 331 n n C13 C18 QX1 doub 332 n y N3 C2 QX1 sing 333 n y C21 C22 QX1 doub 334 n y C5 C6 QX1 doub 335 n y N31 C34 QX1 sing 336 n n N31 C30 QX1 sing 337 n n C12 C9 QX1 sing 338 n n C12 C23 QX1 doub 339 n y C2 C9 QX1 doub 340 n y C2 N1 QX1 sing 341 n y C22 C23 QX1 sing 342 n y C9 C8 QX1 sing 343 n y C6 N1 QX1 sing 344 n y C6 N10 QX1 sing 345 n n C17 C18 QX1 sing 346 n y N1 N7 QX1 sing 347 n y C29 C30 QX1 sing 348 n n C8 N7 QX1 doub 349 n y C14 H1 QX1 sing 350 n n C15 H2 QX1 sing 351 n n C16 H3 QX1 sing 352 n n C17 H4 QX1 sing 353 n n C18 H5 QX1 sing 354 n n C19 H6 QX1 sing 355 n n C22 H7 QX1 sing 356 n n C23 H8 QX1 sing 357 n n C26 H9 QX1 sing 358 n n C26 H10 QX1 sing 359 n n C26 H11 QX1 sing 360 n n C27 H12 QX1 sing 361 n n C27 H13 QX1 sing 362 n n C27 H14 QX1 sing 363 n n C28 H15 QX1 sing 364 n n C29 H16 QX1 sing 365 n n C29 H17 QX1 sing 366 n n C30 H18 QX1 sing 367 n n C30 H19 QX1 sing 368 n n C8 H20 QX1 sing 369 n n N10 H21 QX1 sing 370 n n N10 H22 QX1 sing 371 n n N11 H23 QX1 sing 372 n n C32 H25 QX1 sing 373 n n C32 H26 QX1 sing 374 n n C33 H27 QX1 sing 375 n n C33 H28 QX1 sing 376 n n C34 H29 QX1 sing 377 n n C34 H30 QX1 sing 378 n n C34 H31 QX1 sing 379 n n # _atom_sites.entry_id 6VHG _atom_sites.fract_transf_matrix[1][1] 0.010223 _atom_sites.fract_transf_matrix[1][2] 0.005902 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.011805 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006946 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 QX1 A 1 1101 1 QX1 LI1 . C 3 SO4 A 1 1102 1 SO4 SO4 . D 3 SO4 A 1 1103 2 SO4 SO4 . E 3 SO4 A 1 1104 3 SO4 SO4 . F 3 SO4 A 1 1105 4 SO4 SO4 . G 4 CL A 1 1106 5 CL CL . H 4 CL A 1 1107 6 CL CL . I 5 ACT A 1 1108 7 ACT ACT . J 6 HOH A 1 1201 91 HOH HOH . J 6 HOH A 2 1202 133 HOH HOH . J 6 HOH A 3 1203 4 HOH HOH . J 6 HOH A 4 1204 5 HOH HOH . J 6 HOH A 5 1205 109 HOH HOH . J 6 HOH A 6 1206 85 HOH HOH . J 6 HOH A 7 1207 1 HOH HOH . J 6 HOH A 8 1208 42 HOH HOH . J 6 HOH A 9 1209 38 HOH HOH . J 6 HOH A 10 1210 20 HOH HOH . J 6 HOH A 11 1211 132 HOH HOH . J 6 HOH A 12 1212 12 HOH HOH . J 6 HOH A 13 1213 47 HOH HOH . J 6 HOH A 14 1214 83 HOH HOH . J 6 HOH A 15 1215 61 HOH HOH . J 6 HOH A 16 1216 129 HOH HOH . J 6 HOH A 17 1217 124 HOH HOH . J 6 HOH A 18 1218 35 HOH HOH . J 6 HOH A 19 1219 89 HOH HOH . J 6 HOH A 20 1220 66 HOH HOH . J 6 HOH A 21 1221 6 HOH HOH . J 6 HOH A 22 1222 34 HOH HOH . J 6 HOH A 23 1223 9 HOH HOH . J 6 HOH A 24 1224 36 HOH HOH . J 6 HOH A 25 1225 76 HOH HOH . J 6 HOH A 26 1226 122 HOH HOH . J 6 HOH A 27 1227 10 HOH HOH . J 6 HOH A 28 1228 51 HOH HOH . J 6 HOH A 29 1229 39 HOH HOH . J 6 HOH A 30 1230 41 HOH HOH . J 6 HOH A 31 1231 26 HOH HOH . J 6 HOH A 32 1232 32 HOH HOH . J 6 HOH A 33 1233 73 HOH HOH . J 6 HOH A 34 1234 74 HOH HOH . J 6 HOH A 35 1235 113 HOH HOH . J 6 HOH A 36 1236 21 HOH HOH . J 6 HOH A 37 1237 46 HOH HOH . J 6 HOH A 38 1238 54 HOH HOH . J 6 HOH A 39 1239 19 HOH HOH . J 6 HOH A 40 1240 130 HOH HOH . J 6 HOH A 41 1241 2 HOH HOH . J 6 HOH A 42 1242 50 HOH HOH . J 6 HOH A 43 1243 69 HOH HOH . J 6 HOH A 44 1244 16 HOH HOH . J 6 HOH A 45 1245 7 HOH HOH . J 6 HOH A 46 1246 92 HOH HOH . J 6 HOH A 47 1247 22 HOH HOH . J 6 HOH A 48 1248 70 HOH HOH . J 6 HOH A 49 1249 82 HOH HOH . J 6 HOH A 50 1250 37 HOH HOH . J 6 HOH A 51 1251 94 HOH HOH . J 6 HOH A 52 1252 24 HOH HOH . J 6 HOH A 53 1253 43 HOH HOH . J 6 HOH A 54 1254 65 HOH HOH . J 6 HOH A 55 1255 28 HOH HOH . J 6 HOH A 56 1256 98 HOH HOH . J 6 HOH A 57 1257 99 HOH HOH . J 6 HOH A 58 1258 11 HOH HOH . J 6 HOH A 59 1259 18 HOH HOH . J 6 HOH A 60 1260 49 HOH HOH . J 6 HOH A 61 1261 103 HOH HOH . J 6 HOH A 62 1262 27 HOH HOH . J 6 HOH A 63 1263 13 HOH HOH . J 6 HOH A 64 1264 31 HOH HOH . J 6 HOH A 65 1265 68 HOH HOH . J 6 HOH A 66 1266 60 HOH HOH . J 6 HOH A 67 1267 88 HOH HOH . J 6 HOH A 68 1268 64 HOH HOH . J 6 HOH A 69 1269 48 HOH HOH . J 6 HOH A 70 1270 112 HOH HOH . J 6 HOH A 71 1271 118 HOH HOH . J 6 HOH A 72 1272 55 HOH HOH . J 6 HOH A 73 1273 29 HOH HOH . J 6 HOH A 74 1274 45 HOH HOH . J 6 HOH A 75 1275 15 HOH HOH . J 6 HOH A 76 1276 30 HOH HOH . J 6 HOH A 77 1277 77 HOH HOH . J 6 HOH A 78 1278 62 HOH HOH . J 6 HOH A 79 1279 25 HOH HOH . J 6 HOH A 80 1280 101 HOH HOH . J 6 HOH A 81 1281 72 HOH HOH . J 6 HOH A 82 1282 96 HOH HOH . J 6 HOH A 83 1283 57 HOH HOH . J 6 HOH A 84 1284 8 HOH HOH . J 6 HOH A 85 1285 67 HOH HOH . J 6 HOH A 86 1286 104 HOH HOH . J 6 HOH A 87 1287 114 HOH HOH . J 6 HOH A 88 1288 44 HOH HOH . J 6 HOH A 89 1289 116 HOH HOH . J 6 HOH A 90 1290 93 HOH HOH . J 6 HOH A 91 1291 102 HOH HOH . J 6 HOH A 92 1292 117 HOH HOH . J 6 HOH A 93 1293 33 HOH HOH . J 6 HOH A 94 1294 14 HOH HOH . J 6 HOH A 95 1295 71 HOH HOH . J 6 HOH A 96 1296 90 HOH HOH . J 6 HOH A 97 1297 53 HOH HOH . J 6 HOH A 98 1298 84 HOH HOH . J 6 HOH A 99 1299 126 HOH HOH . J 6 HOH A 100 1300 3 HOH HOH . J 6 HOH A 101 1301 125 HOH HOH . J 6 HOH A 102 1302 23 HOH HOH . J 6 HOH A 103 1303 75 HOH HOH . J 6 HOH A 104 1304 123 HOH HOH . J 6 HOH A 105 1305 97 HOH HOH . J 6 HOH A 106 1306 56 HOH HOH . J 6 HOH A 107 1307 17 HOH HOH . J 6 HOH A 108 1308 100 HOH HOH . J 6 HOH A 109 1309 119 HOH HOH . J 6 HOH A 110 1310 111 HOH HOH . J 6 HOH A 111 1311 107 HOH HOH . J 6 HOH A 112 1312 95 HOH HOH . J 6 HOH A 113 1313 79 HOH HOH . J 6 HOH A 114 1314 115 HOH HOH . J 6 HOH A 115 1315 121 HOH HOH . J 6 HOH A 116 1316 127 HOH HOH . J 6 HOH A 117 1317 52 HOH HOH . J 6 HOH A 118 1318 63 HOH HOH . J 6 HOH A 119 1319 128 HOH HOH . J 6 HOH A 120 1320 108 HOH HOH . J 6 HOH A 121 1321 58 HOH HOH . J 6 HOH A 122 1322 59 HOH HOH . J 6 HOH A 123 1323 110 HOH HOH . J 6 HOH A 124 1324 105 HOH HOH . J 6 HOH A 125 1325 106 HOH HOH . J 6 HOH A 126 1326 80 HOH HOH . J 6 HOH A 127 1327 120 HOH HOH . J 6 HOH A 128 1328 81 HOH HOH . J 6 HOH A 129 1329 87 HOH HOH . J 6 HOH A 130 1330 131 HOH HOH . J 6 HOH A 131 1331 86 HOH HOH . J 6 HOH A 132 1332 78 HOH HOH . J 6 HOH A 133 1333 40 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 QX1 . . . B 2 0.932 143.383 151.806 1 23.06 ? C2 QX1 1101 A 1 HETATM 2 C C12 QX1 . . . B 2 0.929 145.989 151.76 1 26.68 ? C12 QX1 1101 A 1 HETATM 3 C C13 QX1 . . . B 2 1.865 139.314 151.287 1 19.42 ? C13 QX1 1101 A 1 HETATM 4 C C14 QX1 . . . B 2 1.506 138.684 150.096 1 19.11 ? C14 QX1 1101 A 1 HETATM 5 C C15 QX1 . . . B 2 1.783 137.322 149.905 1 18.93 ? C15 QX1 1101 A 1 HETATM 6 C C16 QX1 . . . B 2 2.402 136.567 150.912 1 18.54 ? C16 QX1 1101 A 1 HETATM 7 C C17 QX1 . . . B 2 2.749 137.192 152.099 1 18.78 ? C17 QX1 1101 A 1 HETATM 8 C C18 QX1 . . . B 2 2.464 138.553 152.28 1 19.22 ? C18 QX1 1101 A 1 HETATM 9 C C19 QX1 . . . B 2 2.226 146.13 151.277 1 28.21 ? C19 QX1 1101 A 1 HETATM 10 C C20 QX1 . . . B 2 2.79 147.387 151.047 1 29.71 ? C20 QX1 1101 A 1 HETATM 11 C C21 QX1 . . . B 2 2.043 148.547 151.341 1 29.17 ? C21 QX1 1101 A 1 HETATM 12 C C22 QX1 . . . B 2 0.728 148.415 151.836 1 27.73 ? C22 QX1 1101 A 1 HETATM 13 C C23 QX1 . . . B 2 0.183 147.149 152.055 1 26.99 ? C23 QX1 1101 A 1 HETATM 14 C C26 QX1 . . . B 2 4.719 146.42 149.748 1 31 ? C26 QX1 1101 A 1 HETATM 15 C C27 QX1 . . . B 2 2.214 150.997 151.797 1 29.33 ? C27 QX1 1101 A 1 HETATM 16 C C28 QX1 . . . B 2 5.007 142.219 150.937 1 19.16 ? C28 QX1 1101 A 1 HETATM 17 C C29 QX1 . . . B 2 5.439 142.281 152.422 1 18.65 ? C29 QX1 1101 A 1 HETATM 18 C C30 QX1 . . . B 2 6.719 143.15 152.513 1 19.01 ? C30 QX1 1101 A 1 HETATM 19 N N1 QX1 . . . B 2 0.104 142.441 152.195 1 23.13 ? N1 QX1 1101 A 1 HETATM 20 N N3 QX1 . . . B 2 2.24 143.031 151.317 1 21.25 ? N3 QX1 1101 A 1 HETATM 21 C C4 QX1 . . . B 2 2.592 141.814 151.173 1 20.66 ? C4 QX1 1101 A 1 HETATM 22 C C5 QX1 . . . B 2 1.558 140.783 151.516 1 20.72 ? C5 QX1 1101 A 1 HETATM 23 C C6 QX1 . . . B 2 0.366 141.158 152.046 1 21.8 ? C6 QX1 1101 A 1 HETATM 24 N N7 QX1 . . . B 2 -1.023 143.041 152.638 1 23.81 ? N7 QX1 1101 A 1 HETATM 25 C C8 QX1 . . . B 2 -0.953 144.296 152.522 1 24.2 ? C8 QX1 1101 A 1 HETATM 26 C C9 QX1 . . . B 2 0.38 144.595 151.998 1 24.6 ? C9 QX1 1101 A 1 HETATM 27 N N10 QX1 . . . B 2 -0.567 140.301 152.387 1 21.28 ? N10 QX1 1101 A 1 HETATM 28 N N11 QX1 . . . B 2 3.778 141.442 150.775 1 19.93 ? N11 QX1 1101 A 1 HETATM 29 O O24 QX1 . . . B 2 4.091 147.488 150.51 1 31.22 ? O24 QX1 1101 A 1 HETATM 30 O O25 QX1 . . . B 2 2.644 149.806 151.115 1 29.66 ? O25 QX1 1101 A 1 HETATM 31 N N31 QX1 . . . B 2 7.832 142.566 151.697 1 18.98 ? N31 QX1 1101 A 1 HETATM 32 C C32 QX1 . . . B 2 7.504 142.278 150.269 1 18.81 ? C32 QX1 1101 A 1 HETATM 33 C C33 QX1 . . . B 2 6.138 141.56 150.075 1 18.9 ? C33 QX1 1101 A 1 HETATM 34 C C34 QX1 . . . B 2 9.115 143.286 151.833 1 18.33 ? C34 QX1 1101 A 1 # _model_server_stats.io_time_ms 15 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 8 _model_server_stats.query_time_ms 325 _model_server_stats.encode_time_ms 6 _model_server_stats.element_count 34 #