data_6VHN # _model_server_result.job_id hEOUE25WmO9RM400cXB8Kg _model_server_result.datetime_utc '2024-12-03 14:21:51' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6vhn # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1101}' # _entry.id 6VHN # _exptl.entry_id 6VHN _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 477.554 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-[3-({4-[4-(4-fluorophenyl)-2-(methylsulfanyl)-1H-imidazol-5-yl]pyridin-2-yl}amino)-4-methoxyphenyl]propanamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6VHN _cell.length_a 146.865 _cell.length_b 146.865 _cell.length_c 146.865 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6VHN _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C25 H24 F N5 O2 S' _chem_comp.formula_weight 477.554 _chem_comp.id QQJ _chem_comp.mon_nstd_flag . _chem_comp.name N-[3-({4-[4-(4-fluorophenyl)-2-(methylsulfanyl)-1H-imidazol-5-yl]pyridin-2-yl}amino)-4-methoxyphenyl]propanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C33 C32 QQJ sing 277 n n C32 C31 QQJ sing 278 n n C18 S17 QQJ sing 279 n n S17 C16 QQJ sing 280 n n C31 O08 QQJ doub 281 n n C31 N12 QQJ sing 282 n n N12 C28 QQJ sing 283 n n C16 N04 QQJ doub 284 n y C16 N02 QQJ sing 285 n y N04 C14 QQJ sing 286 n y N02 C15 QQJ sing 287 n y C28 C24 QQJ doub 288 n y C28 C30 QQJ sing 289 n y C24 C25 QQJ sing 290 n y C14 C15 QQJ doub 291 n y C14 C13 QQJ sing 292 n n C30 C27 QQJ doub 293 n y C15 C21 QQJ sing 294 n n C11 C13 QQJ doub 295 n y C11 C09 QQJ sing 296 n y C13 C01 QQJ sing 297 n y C25 C26 QQJ doub 298 n y C21 C20 QQJ doub 299 n y C21 C22 QQJ sing 300 n y C20 C19 QQJ sing 301 n y C27 C26 QQJ sing 302 n y C27 N10 QQJ sing 303 n n C09 C06 QQJ doub 304 n y C26 O05 QQJ sing 305 n n C22 C23 QQJ doub 306 n y C19 N10 QQJ sing 307 n n C19 N07 QQJ doub 308 n y C01 C03 QQJ doub 309 n y C06 C03 QQJ sing 310 n y C06 F34 QQJ sing 311 n n C23 N07 QQJ sing 312 n y O05 C29 QQJ sing 313 n n C01 H1 QQJ sing 314 n n C03 H2 QQJ sing 315 n n C11 H3 QQJ sing 316 n n C09 H4 QQJ sing 317 n n C18 H5 QQJ sing 318 n n C18 H6 QQJ sing 319 n n C18 H7 QQJ sing 320 n n C20 H8 QQJ sing 321 n n C22 H9 QQJ sing 322 n n C23 H10 QQJ sing 323 n n C24 H11 QQJ sing 324 n n C25 H12 QQJ sing 325 n n C29 H13 QQJ sing 326 n n C29 H14 QQJ sing 327 n n C29 H15 QQJ sing 328 n n C30 H16 QQJ sing 329 n n C32 H17 QQJ sing 330 n n C32 H18 QQJ sing 331 n n C33 H19 QQJ sing 332 n n C33 H20 QQJ sing 333 n n C33 H21 QQJ sing 334 n n N02 H22 QQJ sing 335 n n N10 H24 QQJ sing 336 n n N12 H25 QQJ sing 337 n n # _atom_sites.entry_id 6VHN _atom_sites.fract_transf_matrix[1][1] 0.006809 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006809 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006809 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 QQJ A 1 1101 1101 QQJ L57 . C 3 HOH A 1 1201 88 HOH HOH . C 3 HOH A 2 1202 50 HOH HOH . C 3 HOH A 3 1203 2 HOH HOH . C 3 HOH A 4 1204 73 HOH HOH . C 3 HOH A 5 1205 53 HOH HOH . C 3 HOH A 6 1206 70 HOH HOH . C 3 HOH A 7 1207 20 HOH HOH . C 3 HOH A 8 1208 76 HOH HOH . C 3 HOH A 9 1209 43 HOH HOH . C 3 HOH A 10 1210 72 HOH HOH . C 3 HOH A 11 1211 61 HOH HOH . C 3 HOH A 12 1212 19 HOH HOH . C 3 HOH A 13 1213 49 HOH HOH . C 3 HOH A 14 1214 26 HOH HOH . C 3 HOH A 15 1215 5 HOH HOH . C 3 HOH A 16 1216 4 HOH HOH . C 3 HOH A 17 1217 33 HOH HOH . C 3 HOH A 18 1218 7 HOH HOH . C 3 HOH A 19 1219 39 HOH HOH . C 3 HOH A 20 1220 44 HOH HOH . C 3 HOH A 21 1221 11 HOH HOH . C 3 HOH A 22 1222 1 HOH HOH . C 3 HOH A 23 1223 25 HOH HOH . C 3 HOH A 24 1224 28 HOH HOH . C 3 HOH A 25 1225 42 HOH HOH . C 3 HOH A 26 1226 21 HOH HOH . C 3 HOH A 27 1227 97 HOH HOH . C 3 HOH A 28 1228 29 HOH HOH . C 3 HOH A 29 1229 16 HOH HOH . C 3 HOH A 30 1230 14 HOH HOH . C 3 HOH A 31 1231 8 HOH HOH . C 3 HOH A 32 1232 9 HOH HOH . C 3 HOH A 33 1233 6 HOH HOH . C 3 HOH A 34 1234 10 HOH HOH . C 3 HOH A 35 1235 83 HOH HOH . C 3 HOH A 36 1236 18 HOH HOH . C 3 HOH A 37 1237 12 HOH HOH . C 3 HOH A 38 1238 51 HOH HOH . C 3 HOH A 39 1239 15 HOH HOH . C 3 HOH A 40 1240 57 HOH HOH . C 3 HOH A 41 1241 40 HOH HOH . C 3 HOH A 42 1242 32 HOH HOH . C 3 HOH A 43 1243 3 HOH HOH . C 3 HOH A 44 1244 17 HOH HOH . C 3 HOH A 45 1245 27 HOH HOH . C 3 HOH A 46 1246 22 HOH HOH . C 3 HOH A 47 1247 24 HOH HOH . C 3 HOH A 48 1248 48 HOH HOH . C 3 HOH A 49 1249 54 HOH HOH . C 3 HOH A 50 1250 81 HOH HOH . C 3 HOH A 51 1251 55 HOH HOH . C 3 HOH A 52 1252 36 HOH HOH . C 3 HOH A 53 1253 13 HOH HOH . C 3 HOH A 54 1254 74 HOH HOH . C 3 HOH A 55 1255 35 HOH HOH . C 3 HOH A 56 1256 46 HOH HOH . C 3 HOH A 57 1257 79 HOH HOH . C 3 HOH A 58 1258 89 HOH HOH . C 3 HOH A 59 1259 37 HOH HOH . C 3 HOH A 60 1260 38 HOH HOH . C 3 HOH A 61 1261 84 HOH HOH . C 3 HOH A 62 1262 30 HOH HOH . C 3 HOH A 63 1263 78 HOH HOH . C 3 HOH A 64 1264 56 HOH HOH . C 3 HOH A 65 1265 85 HOH HOH . C 3 HOH A 66 1266 52 HOH HOH . C 3 HOH A 67 1267 68 HOH HOH . C 3 HOH A 68 1268 91 HOH HOH . C 3 HOH A 69 1269 45 HOH HOH . C 3 HOH A 70 1270 82 HOH HOH . C 3 HOH A 71 1271 31 HOH HOH . C 3 HOH A 72 1272 23 HOH HOH . C 3 HOH A 73 1273 69 HOH HOH . C 3 HOH A 74 1274 67 HOH HOH . C 3 HOH A 75 1275 58 HOH HOH . C 3 HOH A 76 1276 41 HOH HOH . C 3 HOH A 77 1277 96 HOH HOH . C 3 HOH A 78 1278 93 HOH HOH . C 3 HOH A 79 1279 77 HOH HOH . C 3 HOH A 80 1280 47 HOH HOH . C 3 HOH A 81 1281 94 HOH HOH . C 3 HOH A 82 1282 90 HOH HOH . C 3 HOH A 83 1283 59 HOH HOH . C 3 HOH A 84 1284 92 HOH HOH . C 3 HOH A 85 1285 60 HOH HOH . C 3 HOH A 86 1286 65 HOH HOH . C 3 HOH A 87 1287 64 HOH HOH . C 3 HOH A 88 1288 66 HOH HOH . C 3 HOH A 89 1289 86 HOH HOH . C 3 HOH A 90 1290 71 HOH HOH . C 3 HOH A 91 1291 98 HOH HOH . C 3 HOH A 92 1292 87 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C06 QQJ . . . B 2 -53.063 -2.449 28.902 1 61.98 ? C06 QQJ 1101 A 1 HETATM 2 C C01 QQJ . . . B 2 -52.077 -2.246 26.817 1 60.97 ? C01 QQJ 1101 A 1 HETATM 3 C C03 QQJ . . . B 2 -52.549 -3.053 27.803 1 54.96 ? C03 QQJ 1101 A 1 HETATM 4 C C16 QQJ . . . B 2 -50.194 1.309 24.915 1 73.35 ? C16 QQJ 1101 A 1 HETATM 5 C C13 QQJ . . . B 2 -52.124 -0.887 26.899 1 61.66 ? C13 QQJ 1101 A 1 HETATM 6 C C11 QQJ . . . B 2 -52.617 -0.297 28.019 1 57.86 ? C11 QQJ 1101 A 1 HETATM 7 C C09 QQJ . . . B 2 -53.106 -1.088 29.024 1 59.72 ? C09 QQJ 1101 A 1 HETATM 8 C C14 QQJ . . . B 2 -51.544 -0.063 25.772 1 66.56 ? C14 QQJ 1101 A 1 HETATM 9 C C15 QQJ . . . B 2 -51.87 0.057 24.455 1 65.64 ? C15 QQJ 1101 A 1 HETATM 10 C C18 QQJ . . . B 2 -48.194 2.816 26.351 1 76.9 ? C18 QQJ 1101 A 1 HETATM 11 C C19 QQJ . . . B 2 -53.592 -1.158 21.257 1 55.98 ? C19 QQJ 1101 A 1 HETATM 12 C C20 QQJ . . . B 2 -52.691 -0.607 22.136 1 58.04 ? C20 QQJ 1101 A 1 HETATM 13 C C21 QQJ . . . B 2 -52.923 -0.579 23.521 1 64.28 ? C21 QQJ 1101 A 1 HETATM 14 C C22 QQJ . . . B 2 -54.104 -1.135 23.94 1 53.36 ? C22 QQJ 1101 A 1 HETATM 15 C C23 QQJ . . . B 2 -54.942 -1.664 22.999 1 52.55 ? C23 QQJ 1101 A 1 HETATM 16 C C24 QQJ . . . B 2 -50.822 1.324 17.719 1 58.39 ? C24 QQJ 1101 A 1 HETATM 17 C C25 QQJ . . . B 2 -51.165 0.114 17.215 1 55.12 ? C25 QQJ 1101 A 1 HETATM 18 C C26 QQJ . . . B 2 -52.002 -0.735 17.87 1 60.02 ? C26 QQJ 1101 A 1 HETATM 19 C C27 QQJ . . . B 2 -52.511 -0.373 19.092 1 58.21 ? C27 QQJ 1101 A 1 HETATM 20 C C28 QQJ . . . B 2 -51.312 1.695 18.92 1 60.85 ? C28 QQJ 1101 A 1 HETATM 21 C C29 QQJ . . . B 2 -53.274 -2.68 17.349 1 53.89 ? C29 QQJ 1101 A 1 HETATM 22 C C30 QQJ . . . B 2 -52.178 0.854 19.598 1 56.65 ? C30 QQJ 1101 A 1 HETATM 23 C C31 QQJ . . . B 2 -50.458 3.231 20.713 1 74.18 ? C31 QQJ 1101 A 1 HETATM 24 C C32 QQJ . . . B 2 -50.07 4.616 21.212 1 74.33 ? C32 QQJ 1101 A 1 HETATM 25 C C33 QQJ . . . B 2 -48.613 4.771 21.632 1 69.28 ? C33 QQJ 1101 A 1 HETATM 26 F F34 QQJ . . . B 2 -53.539 -3.218 29.856 1 65.27 ? F34 QQJ 1101 A 1 HETATM 27 N N02 QQJ . . . B 2 -51.017 0.89 23.993 1 70.03 ? N02 QQJ 1101 A 1 HETATM 28 N N04 QQJ . . . B 2 -50.537 0.703 26.013 1 65.88 ? N04 QQJ 1101 A 1 HETATM 29 N N07 QQJ . . . B 2 -54.661 -1.684 21.73 1 52.1 ? N07 QQJ 1101 A 1 HETATM 30 N N10 QQJ . . . B 2 -53.392 -1.211 19.836 1 54.26 ? N10 QQJ 1101 A 1 HETATM 31 N N12 QQJ . . . B 2 -50.929 3.002 19.384 1 64.85 ? N12 QQJ 1101 A 1 HETATM 32 O O05 QQJ . . . B 2 -52.203 -1.894 17.157 1 62.26 ? O05 QQJ 1101 A 1 HETATM 33 O O08 QQJ . . . B 2 -50.39 2.32 21.42 1 77.19 ? O08 QQJ 1101 A 1 HETATM 34 S S17 QQJ . . . B 2 -48.838 2.479 24.717 1 82.4 ? S17 QQJ 1101 A 1 # _model_server_stats.io_time_ms 50 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 34 #