data_6VHP # _model_server_result.job_id I6c_H7rPHO3wpr46pHJvxQ _model_server_result.datetime_utc '2024-12-22 02:21:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6vhp # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":1101}' # _entry.id 6VHP # _exptl.entry_id 6VHP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 521.606 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description N-{3-[(4-{4-(4-fluorophenyl)-2-[(2-methoxyethyl)sulfanyl]-1H-imidazol-5-yl}pyridin-2-yl)amino]-4-methoxyphenyl}propanamide _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6VHP _cell.length_a 145.811 _cell.length_b 145.811 _cell.length_c 145.811 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6VHP _symmetry.cell_setting ? _symmetry.Int_Tables_number 197 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 2 3' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _struct_conn.conn_type_id covale _struct_conn.details ? _struct_conn.id covale1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 102 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 797 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id C33 _struct_conn.ptnr2_label_comp_id QP1 _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id QP1 _struct_conn.ptnr2_auth_seq_id 1101 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 1.766 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C27 H28 F N5 O3 S' _chem_comp.formula_weight 521.606 _chem_comp.id QP1 _chem_comp.mon_nstd_flag . _chem_comp.name N-{3-[(4-{4-(4-fluorophenyl)-2-[(2-methoxyethyl)sulfanyl]-1H-imidazol-5-yl}pyridin-2-yl)amino]-4-methoxyphenyl}propanamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag F34 C06 QP1 sing 275 n n C29 O05 QP1 sing 276 n n C09 C06 QP1 doub 277 n y C09 C11 QP1 sing 278 n y C23 N07 QP1 doub 279 n y C23 C22 QP1 sing 280 n y N07 C19 QP1 sing 281 n y C06 C03 QP1 sing 282 n y O05 C26 QP1 sing 283 n n C11 C13 QP1 doub 284 n y C22 C21 QP1 doub 285 n y C19 N10 QP1 sing 286 n n C19 C20 QP1 doub 287 n y N10 C27 QP1 sing 288 n n C03 C01 QP1 doub 289 n y C26 C27 QP1 doub 290 n y C26 C25 QP1 sing 291 n y C27 C30 QP1 sing 292 n y C13 C01 QP1 sing 293 n y C13 C14 QP1 sing 294 n n C21 C20 QP1 sing 295 n y C21 C15 QP1 sing 296 n n C25 C24 QP1 doub 297 n y C14 C15 QP1 doub 298 n y C14 N04 QP1 sing 299 n y C15 N02 QP1 sing 300 n y C30 C28 QP1 doub 301 n y C24 C28 QP1 sing 302 n y C28 N12 QP1 sing 303 n n N04 C16 QP1 doub 304 n y N02 C16 QP1 sing 305 n y C16 S17 QP1 sing 306 n n N12 C31 QP1 sing 307 n n O08 C31 QP1 doub 308 n n C31 C32 QP1 sing 309 n n S17 C18 QP1 sing 310 n n C35 O36 QP1 sing 311 n n C35 C18 QP1 sing 312 n n C37 O36 QP1 sing 313 n n C32 C33 QP1 sing 314 n n C11 H1 QP1 sing 315 n n C18 H2 QP1 sing 316 n n C18 H3 QP1 sing 317 n n C20 H4 QP1 sing 318 n n C24 H5 QP1 sing 319 n n C25 H6 QP1 sing 320 n n C29 H7 QP1 sing 321 n n C29 H8 QP1 sing 322 n n C29 H9 QP1 sing 323 n n C30 H10 QP1 sing 324 n n C32 H11 QP1 sing 325 n n C32 H12 QP1 sing 326 n n C33 H13 QP1 sing 327 n n C33 H14 QP1 sing 328 n n C33 H15 QP1 sing 329 n n C35 H16 QP1 sing 330 n n C35 H17 QP1 sing 331 n n C01 H18 QP1 sing 332 n n C03 H19 QP1 sing 333 n n C09 H20 QP1 sing 334 n n C22 H21 QP1 sing 335 n n C23 H22 QP1 sing 336 n n C37 H23 QP1 sing 337 n n C37 H24 QP1 sing 338 n n C37 H25 QP1 sing 339 n n N02 H26 QP1 sing 340 n n N10 H28 QP1 sing 341 n n N12 H29 QP1 sing 342 n n # _atom_sites.entry_id 6VHP _atom_sites.fract_transf_matrix[1][1] 0.006858 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.006858 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006858 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id QP1 _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 1101 _pdbx_nonpoly_scheme.auth_seq_num 1101 _pdbx_nonpoly_scheme.pdb_mon_id QP1 _pdbx_nonpoly_scheme.auth_mon_id L29 _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C11 QP1 . . . B 2 -0.407 -52.257 27.625 1 65.51 ? C11 QP1 1101 A 1 HETATM 2 C C18 QP1 . . . B 2 -3.655 -48.054 22.438 1 93.75 ? C18 QP1 1101 A 1 HETATM 3 C C19 QP1 . . . B 2 0.887 -53.293 21.042 1 36.9 ? C19 QP1 1101 A 1 HETATM 4 C C20 QP1 . . . B 2 0.138 -52.218 21.83 1 49.78 ? C20 QP1 1101 A 1 HETATM 5 C C21 QP1 . . . B 2 0.046 -52.292 23.318 1 51.04 ? C21 QP1 1101 A 1 HETATM 6 C C24 QP1 . . . B 2 -1.345 -50.604 16.811 1 56.03 ? C24 QP1 1101 A 1 HETATM 7 C C25 QP1 . . . B 2 0.143 -50.876 16.554 1 65.76 ? C25 QP1 1101 A 1 HETATM 8 C C27 QP1 . . . B 2 0.233 -52.406 18.712 1 37.39 ? C27 QP1 1101 A 1 HETATM 9 C C29 QP1 . . . B 2 2.609 -52.205 15.929 1 65.1 ? C29 QP1 1101 A 1 HETATM 10 C C30 QP1 . . . B 2 -1.244 -52.136 18.955 1 44.16 ? C30 QP1 1101 A 1 HETATM 11 C C31 QP1 . . . B 2 -3.992 -50.695 19.574 1 75.57 ? C31 QP1 1101 A 1 HETATM 12 C C32 QP1 . . . B 2 -5.486 -50.433 19.735 1 74.91 ? C32 QP1 1101 A 1 HETATM 13 C C33 QP1 . . . B 2 -6.205 -50.776 18.435 1 67.91 ? C33 QP1 1101 A 1 HETATM 14 C C35 QP1 . . . B 2 -2.443 -47.385 21.794 1 97 ? C35 QP1 1101 A 1 HETATM 15 O O36 QP1 . . . B 2 -2.005 -48.151 20.708 1 86.25 ? O36 QP1 1101 A 1 HETATM 16 C C01 QP1 . . . B 2 1.756 -51.34 26.408 1 71.35 ? C01 QP1 1101 A 1 HETATM 17 C C03 QP1 . . . B 2 2.629 -51.964 27.493 1 63.34 ? C03 QP1 1101 A 1 HETATM 18 C C06 QP1 . . . B 2 1.984 -52.736 28.642 1 63.29 ? C06 QP1 1101 A 1 HETATM 19 C C09 QP1 . . . B 2 0.466 -52.882 28.71 1 68.58 ? C09 QP1 1101 A 1 HETATM 20 C C13 QP1 . . . B 2 0.238 -51.489 26.474 1 70.3 ? C13 QP1 1101 A 1 HETATM 21 C C14 QP1 . . . B 2 -0.646 -50.866 25.395 1 75.78 ? C14 QP1 1101 A 1 HETATM 22 C C15 QP1 . . . B 2 -0.723 -51.204 24.072 1 64.36 ? C15 QP1 1101 A 1 HETATM 23 C C16 QP1 . . . B 2 -2.092 -49.583 24.454 1 62.63 ? C16 QP1 1101 A 1 HETATM 24 C C22 QP1 . . . B 2 0.692 -53.433 24.031 1 52.33 ? C22 QP1 1101 A 1 HETATM 25 C C23 QP1 . . . B 2 1.447 -54.504 23.249 1 64.84 ? C23 QP1 1101 A 1 HETATM 26 C C26 QP1 . . . B 2 0.927 -51.781 17.508 1 46.98 ? C26 QP1 1101 A 1 HETATM 27 C C28 QP1 . . . B 2 -2.037 -51.233 18.021 1 49.99 ? C28 QP1 1101 A 1 HETATM 28 C C37 QP1 . . . B 2 -0.687 -48.603 20.828 1 78.69 ? C37 QP1 1101 A 1 HETATM 29 F F34 QP1 . . . B 2 2.764 -53.295 29.612 1 66.96 ? F34 QP1 1101 A 1 HETATM 30 N N02 QP1 . . . B 2 -1.612 -50.411 23.516 1 58.3 ? N02 QP1 1101 A 1 HETATM 31 N N04 QP1 . . . B 2 -1.485 -49.877 25.61 1 74.75 ? N04 QP1 1101 A 1 HETATM 32 N N07 QP1 . . . B 2 1.531 -54.417 21.77 1 44.87 ? N07 QP1 1101 A 1 HETATM 33 N N10 QP1 . . . B 2 1.006 -53.265 19.593 1 40.76 ? N10 QP1 1101 A 1 HETATM 34 N N12 QP1 . . . B 2 -3.451 -50.973 18.252 1 63.3 ? N12 QP1 1101 A 1 HETATM 35 O O05 QP1 . . . B 2 2.283 -52.034 17.278 1 52.49 ? O05 QP1 1101 A 1 HETATM 36 O O08 QP1 . . . B 2 -3.293 -50.669 20.527 1 83.63 ? O08 QP1 1101 A 1 HETATM 37 S S17 QP1 . . . B 2 -3.345 -48.29 24.211 1 110.71 ? S17 QP1 1101 A 1 # _model_server_stats.io_time_ms 10 _model_server_stats.parse_time_ms 9 _model_server_stats.create_model_time_ms 14 _model_server_stats.query_time_ms 237 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 37 #