data_6VIF
#
_model_server_result.job_id            btBj156LRFMvRhDW2qjgAg 
_model_server_result.datetime_utc      '2024-12-28 05:20:00' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6vif 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":601}' 
#
_entry.id    6VIF 
#
_exptl.entry_id    6VIF 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              481.693 
_entity.id                          3 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            'N-[(8beta,11alpha,12alpha)-8-{[methyl(phenyl)amino]methyl}-1,6:7,14-dicycloprosta-1(6),2,4,7(14)-tetraen-11-yl]sulfuric diamide' 
_entity.pdbx_number_of_molecules    1 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6VIF 
_cell.length_a            46.134 
_cell.length_b            46.134 
_cell.length_c            223.436 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6VIF 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        96 
_symmetry.space_group_name_Hall    'P 4nw 2abw' 
_symmetry.space_group_name_H-M     'P 43 21 2' 
#
_pdbx_struct_assembly.method_details        PISA 
_pdbx_struct_assembly.oligomeric_details    dimeric 
_pdbx_struct_assembly.oligomeric_count      2 
_pdbx_struct_assembly.details               author_and_software_defined_assembly 
_pdbx_struct_assembly.id                    1 
#
_pdbx_struct_assembly_gen.asym_id_list       A,B,C,D 
_pdbx_struct_assembly_gen.assembly_id        1 
_pdbx_struct_assembly_gen.oper_expression    1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
_struct_asym.details                        ? 
_struct_asym.entity_id                      3 
_struct_asym.id                             C 
_struct_asym.pdbx_modified                  N 
_struct_asym.pdbx_blank_PDB_chainid_flag    N 
#
_chem_comp.formula           'C28 H39 N3 O2 S' 
_chem_comp.formula_weight    481.693 
_chem_comp.id                QY4 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              'N-[(8beta,11alpha,12alpha)-8-{[methyl(phenyl)amino]methyl}-1,6:7,14-dicycloprosta-1(6),2,4,7(14)-tetraen-11-yl]sulfuric diamide' 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
O31 S29 QY4 doub 277 n n 
O32 S29 QY4 doub 278 n n 
N30 S29 QY4 sing 279 n n 
S29 N28 QY4 sing 280 n n 
N28 C27 QY4 sing 281 n n 
C27 C11 QY4 sing 282 n n 
C27 C33 QY4 sing 283 n n 
C12 C11 QY4 sing 284 n n 
C12 C13 QY4 sing 285 n n 
C11 C10 QY4 sing 286 n n 
C01 N02 QY4 sing 287 n n 
C33 C34 QY4 sing 288 n n 
C19 C18 QY4 sing 289 n n 
C15 C14 QY4 sing 290 n n 
C15 C16 QY4 sing 291 n n 
C13 C14 QY4 sing 292 n n 
C13 C20 QY4 doub 293 n n 
C17 C18 QY4 sing 294 n n 
C17 C16 QY4 sing 295 n n 
C10 C34 QY4 sing 296 n n 
C10 C09 QY4 sing 297 n n 
C10 C20 QY4 sing 298 n n 
N02 C09 QY4 sing 299 n n 
N02 C03 QY4 sing 300 n n 
C08 C03 QY4 doub 301 n y 
C08 C07 QY4 sing 302 n y 
C20 C21 QY4 sing 303 n n 
C03 C04 QY4 sing 304 n y 
C07 C06 QY4 doub 305 n y 
C04 C05 QY4 doub 306 n y 
C06 C05 QY4 sing 307 n y 
C21 C26 QY4 doub 308 n y 
C21 C22 QY4 sing 309 n y 
C26 C25 QY4 sing 310 n y 
C22 C23 QY4 doub 311 n y 
C25 C24 QY4 doub 312 n y 
C23 C24 QY4 sing 313 n y 
C15 H2 QY4 sing 314 n n 
C15 H3 QY4 sing 315 n n 
C17 H4 QY4 sing 316 n n 
C17 H5 QY4 sing 317 n n 
C22 H7 QY4 sing 318 n n 
C24 H8 QY4 sing 319 n n 
C26 H9 QY4 sing 320 n n 
C01 H10 QY4 sing 321 n n 
C01 H11 QY4 sing 322 n n 
C01 H12 QY4 sing 323 n n 
C04 H13 QY4 sing 324 n n 
C05 H14 QY4 sing 325 n n 
C06 H15 QY4 sing 326 n n 
C07 H16 QY4 sing 327 n n 
C08 H17 QY4 sing 328 n n 
C09 H18 QY4 sing 329 n n 
C09 H19 QY4 sing 330 n n 
C11 H20 QY4 sing 331 n n 
C12 H21 QY4 sing 332 n n 
C12 H22 QY4 sing 333 n n 
C14 H23 QY4 sing 334 n n 
C14 H24 QY4 sing 335 n n 
C16 H25 QY4 sing 336 n n 
C16 H26 QY4 sing 337 n n 
C18 H27 QY4 sing 338 n n 
C18 H28 QY4 sing 339 n n 
C19 H29 QY4 sing 340 n n 
C19 H30 QY4 sing 341 n n 
C19 H31 QY4 sing 342 n n 
C23 H32 QY4 sing 343 n n 
C25 H33 QY4 sing 344 n n 
C27 H34 QY4 sing 345 n n 
C33 H35 QY4 sing 346 n n 
C33 H36 QY4 sing 347 n n 
C34 H37 QY4 sing 348 n n 
C34 H38 QY4 sing 349 n n 
N28 H39 QY4 sing 350 n n 
N30 H40 QY4 sing 351 n n 
N30 H41 QY4 sing 352 n n 
#
_atom_sites.entry_id                     6VIF 
_atom_sites.fract_transf_matrix[1][1]    0.021676 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.021676 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.004476 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 QY4 A 1 601 1 QY4 LIG . 
D 4 HOH A 1 701 4 HOH HOH . 
D 4 HOH A 2 702 3 HOH HOH . 
D 4 HOH A 3 703 8 HOH HOH . 
D 4 HOH A 4 704 9 HOH HOH . 
D 4 HOH A 5 705 11 HOH HOH . 
D 4 HOH A 6 706 5 HOH HOH . 
D 4 HOH A 7 707 7 HOH HOH . 
D 4 HOH A 8 708 1 HOH HOH . 
D 4 HOH A 9 709 6 HOH HOH . 
D 4 HOH A 10 710 2 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 QY4 . . . C 3 -19.566 11.158 -12.652 1 63.41 ? C10 QY4 601 A 1 
HETATM 2 C C13 QY4 . . . C 3 -21.444 12.741 -12.891 1 65.63 ? C13 QY4 601 A 1 
HETATM 3 C C15 QY4 . . . C 3 -23.991 12.748 -12.916 1 78.29 ? C15 QY4 601 A 1 
HETATM 4 C C17 QY4 . . . C 3 -25.261 10.533 -12.874 1 86.76 ? C17 QY4 601 A 1 
HETATM 5 C C20 QY4 . . . C 3 -20.375 12.168 -11.923 1 63.42 ? C20 QY4 601 A 1 
HETATM 6 C C21 QY4 . . . C 3 -20.211 12.55 -10.452 1 59.38 ? C21 QY4 601 A 1 
HETATM 7 C C22 QY4 . . . C 3 -20.867 11.828 -9.467 1 59.3 ? C22 QY4 601 A 1 
HETATM 8 C C24 QY4 . . . C 3 -19.913 13.248 -7.784 1 55.05 ? C24 QY4 601 A 1 
HETATM 9 C C26 QY4 . . . C 3 -19.406 13.623 -10.1 1 51.81 ? C26 QY4 601 A 1 
HETATM 10 C C01 QY4 . . . C 3 -19.7 7.942 -13.836 1 64.99 ? C01 QY4 601 A 1 
HETATM 11 C C03 QY4 . . . C 3 -18.135 7.946 -11.893 1 67.13 ? C03 QY4 601 A 1 
HETATM 12 C C04 QY4 . . . C 3 -17.365 8.649 -10.979 1 68.61 ? C04 QY4 601 A 1 
HETATM 13 C C05 QY4 . . . C 3 -16.323 8.023 -10.313 1 67.67 ? C05 QY4 601 A 1 
HETATM 14 C C06 QY4 . . . C 3 -16.051 6.686 -10.552 1 68.24 ? C06 QY4 601 A 1 
HETATM 15 C C07 QY4 . . . C 3 -16.821 5.976 -11.46 1 68.34 ? C07 QY4 601 A 1 
HETATM 16 C C08 QY4 . . . C 3 -17.861 6.605 -12.127 1 68.1 ? C08 QY4 601 A 1 
HETATM 17 C C09 QY4 . . . C 3 -19.92 9.762 -12.078 1 66.6 ? C09 QY4 601 A 1 
HETATM 18 C C11 QY4 . . . C 3 -19.938 11.341 -14.175 1 63.43 ? C11 QY4 601 A 1 
HETATM 19 C C12 QY4 . . . C 3 -21.221 12.17 -14.224 1 63.27 ? C12 QY4 601 A 1 
HETATM 20 C C14 QY4 . . . C 3 -22.718 13.48 -12.462 1 72.51 ? C14 QY4 601 A 1 
HETATM 21 C C16 QY4 . . . C 3 -24.138 11.373 -12.256 1 83.88 ? C16 QY4 601 A 1 
HETATM 22 C C18 QY4 . . . C 3 -26.647 11.129 -12.628 1 89.31 ? C18 QY4 601 A 1 
HETATM 23 C C19 QY4 . . . C 3 -27.766 10.222 -13.148 1 91.41 ? C19 QY4 601 A 1 
HETATM 24 C C23 QY4 . . . C 3 -20.718 12.176 -8.134 1 61.07 ? C23 QY4 601 A 1 
HETATM 25 C C25 QY4 . . . C 3 -19.257 13.971 -8.768 1 55.24 ? C25 QY4 601 A 1 
HETATM 26 C C27 QY4 . . . C 3 -18.857 11.941 -14.782 1 62.33 ? C27 QY4 601 A 1 
HETATM 27 C C33 QY4 . . . C 3 -17.783 12.333 -13.61 1 63.86 ? C33 QY4 601 A 1 
HETATM 28 C C34 QY4 . . . C 3 -18.029 11.488 -12.566 1 61.69 ? C34 QY4 601 A 1 
HETATM 29 N N02 QY4 . . . C 3 -19.241 8.574 -12.61 1 65.35 ? N02 QY4 601 A 1 
HETATM 30 N N28 QY4 . . . C 3 -19.27 13.143 -15.512 1 64.5 ? N28 QY4 601 A 1 
HETATM 31 N N30 QY4 . . . C 3 -20.92 12.397 -17.637 1 69.62 ? N30 QY4 601 A 1 
HETATM 32 O O31 QY4 . . . C 3 -18.295 12.357 -17.819 1 65.03 ? O31 QY4 601 A 1 
HETATM 33 O O32 QY4 . . . C 3 -19.255 14.41 -17.814 1 69.74 ? O32 QY4 601 A 1 
HETATM 34 S S29 QY4 . . . C 3 -19.414 13.083 -17.214 1 66.8 ? S29 QY4 601 A 1 
#
_model_server_stats.io_time_ms              59 
_model_server_stats.parse_time_ms           16 
_model_server_stats.create_model_time_ms    4 
_model_server_stats.query_time_ms           314 
_model_server_stats.encode_time_ms          7 
_model_server_stats.element_count           34 
#