data_6VIP # _model_server_result.job_id A6kysnLp5rnrza2C0GXlrA _model_server_result.datetime_utc '2025-02-20 21:41:48' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6vip # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"F","auth_seq_id":1701}' # _entry.id 6VIP # _exptl.entry_id 6VIP _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 326.436 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description {4-[(3,5-dimethyl-1H-pyrazol-1-yl)methyl]phenyl}(4-ethylpiperazin-1-yl)methanone _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6VIP _cell.length_a 57.887 _cell.length_b 60.156 _cell.length_c 69.721 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6VIP _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 21 21 21' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 software_defined_assembly 1 PISA monomeric 1 software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,I 1 1 B,F,G,H,J 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 F N N # _chem_comp.formula 'C19 H26 N4 O' _chem_comp.formula_weight 326.436 _chem_comp.id QXY _chem_comp.mon_nstd_flag . _chem_comp.name {4-[(3,5-dimethyl-1H-pyrazol-1-yl)methyl]phenyl}(4-ethylpiperazin-1-yl)methanone _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag C11 C10 QXY sing 277 n n C11 N2 QXY sing 278 n n C10 C9 QXY doub 279 n y C10 C17 QXY sing 280 n y C9 C8 QXY sing 281 n y C17 C18 QXY doub 282 n y N2 C12 QXY sing 283 n y N2 N3 QXY sing 284 n y O C6 QXY doub 285 n n C13 C12 QXY sing 286 n n C18 C7 QXY sing 287 n y C8 C7 QXY doub 288 n y C7 C6 QXY sing 289 n n C12 C14 QXY doub 290 n y N3 C15 QXY doub 291 n y C6 N1 QXY sing 292 n n C15 C14 QXY sing 293 n y C15 C16 QXY sing 294 n n N1 C4 QXY sing 295 n n N1 C3 QXY sing 296 n n C4 C5 QXY sing 297 n n C3 C2 QXY sing 298 n n C5 N QXY sing 299 n n C2 N QXY sing 300 n n N C1 QXY sing 301 n n C1 C QXY sing 302 n n C4 H1 QXY sing 303 n n C4 H2 QXY sing 304 n n C5 H3 QXY sing 305 n n C5 H4 QXY sing 306 n n C8 H5 QXY sing 307 n n C9 H6 QXY sing 308 n n C11 H7 QXY sing 309 n n C11 H8 QXY sing 310 n n C13 H9 QXY sing 311 n n C13 H10 QXY sing 312 n n C13 H11 QXY sing 313 n n C14 H12 QXY sing 314 n n C3 H13 QXY sing 315 n n C3 H14 QXY sing 316 n n C2 H15 QXY sing 317 n n C2 H16 QXY sing 318 n n C1 H18 QXY sing 319 n n C1 H19 QXY sing 320 n n C H20 QXY sing 321 n n C H21 QXY sing 322 n n C H22 QXY sing 323 n n C18 H23 QXY sing 324 n n C17 H24 QXY sing 325 n n C16 H25 QXY sing 326 n n C16 H26 QXY sing 327 n n C16 H27 QXY sing 328 n n # _atom_sites.entry_id 6VIP _atom_sites.fract_transf_matrix[1][1] 0.017275 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016623 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.014343 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 QXY A 1 1701 3000 QXY XXX . D 3 UNX A 1 1702 1000 UNX UNX . E 3 UNX A 1 1703 1002 UNX UNX . F 2 QXY B 1 1701 3000 QXY XXX . G 3 UNX B 1 1702 1001 UNX UNX . H 3 UNX B 1 1703 1003 UNX UNX . I 4 HOH A 1 1801 129 HOH HOH . I 4 HOH A 2 1802 102 HOH HOH . I 4 HOH A 3 1803 61 HOH HOH . I 4 HOH A 4 1804 122 HOH HOH . I 4 HOH A 5 1805 109 HOH HOH . I 4 HOH A 6 1806 125 HOH HOH . I 4 HOH A 7 1807 139 HOH HOH . I 4 HOH A 8 1808 126 HOH HOH . I 4 HOH A 9 1809 10 HOH HOH . I 4 HOH A 10 1810 77 HOH HOH . I 4 HOH A 11 1811 56 HOH HOH . I 4 HOH A 12 1812 134 HOH HOH . I 4 HOH A 13 1813 27 HOH HOH . I 4 HOH A 14 1814 75 HOH HOH . I 4 HOH A 15 1815 49 HOH HOH . I 4 HOH A 16 1816 52 HOH HOH . I 4 HOH A 17 1817 44 HOH HOH . I 4 HOH A 18 1818 157 HOH HOH . I 4 HOH A 19 1819 153 HOH HOH . I 4 HOH A 20 1820 82 HOH HOH . I 4 HOH A 21 1821 76 HOH HOH . I 4 HOH A 22 1822 50 HOH HOH . I 4 HOH A 23 1823 13 HOH HOH . I 4 HOH A 24 1824 137 HOH HOH . I 4 HOH A 25 1825 99 HOH HOH . I 4 HOH A 26 1826 1 HOH HOH . I 4 HOH A 27 1827 54 HOH HOH . I 4 HOH A 28 1828 161 HOH HOH . I 4 HOH A 29 1829 51 HOH HOH . I 4 HOH A 30 1830 53 HOH HOH . I 4 HOH A 31 1831 141 HOH HOH . I 4 HOH A 32 1832 38 HOH HOH . I 4 HOH A 33 1833 110 HOH HOH . I 4 HOH A 34 1834 68 HOH HOH . I 4 HOH A 35 1835 11 HOH HOH . I 4 HOH A 36 1836 72 HOH HOH . I 4 HOH A 37 1837 95 HOH HOH . I 4 HOH A 38 1838 124 HOH HOH . I 4 HOH A 39 1839 45 HOH HOH . I 4 HOH A 40 1840 140 HOH HOH . I 4 HOH A 41 1841 24 HOH HOH . I 4 HOH A 42 1842 43 HOH HOH . I 4 HOH A 43 1843 47 HOH HOH . I 4 HOH A 44 1844 18 HOH HOH . I 4 HOH A 45 1845 93 HOH HOH . I 4 HOH A 46 1846 85 HOH HOH . I 4 HOH A 47 1847 30 HOH HOH . I 4 HOH A 48 1848 131 HOH HOH . I 4 HOH A 49 1849 111 HOH HOH . I 4 HOH A 50 1850 19 HOH HOH . I 4 HOH A 51 1851 138 HOH HOH . I 4 HOH A 52 1852 103 HOH HOH . I 4 HOH A 53 1853 25 HOH HOH . I 4 HOH A 54 1854 23 HOH HOH . I 4 HOH A 55 1855 41 HOH HOH . I 4 HOH A 56 1856 2 HOH HOH . I 4 HOH A 57 1857 104 HOH HOH . I 4 HOH A 58 1858 130 HOH HOH . I 4 HOH A 59 1859 162 HOH HOH . I 4 HOH A 60 1860 42 HOH HOH . I 4 HOH A 61 1861 71 HOH HOH . I 4 HOH A 62 1862 12 HOH HOH . I 4 HOH A 63 1863 70 HOH HOH . I 4 HOH A 64 1864 74 HOH HOH . I 4 HOH A 65 1865 81 HOH HOH . I 4 HOH A 66 1866 98 HOH HOH . I 4 HOH A 67 1867 60 HOH HOH . I 4 HOH A 68 1868 101 HOH HOH . I 4 HOH A 69 1869 133 HOH HOH . I 4 HOH A 70 1870 135 HOH HOH . I 4 HOH A 71 1871 154 HOH HOH . I 4 HOH A 72 1872 100 HOH HOH . I 4 HOH A 73 1873 67 HOH HOH . I 4 HOH A 74 1874 132 HOH HOH . I 4 HOH A 75 1875 107 HOH HOH . I 4 HOH A 76 1876 105 HOH HOH . I 4 HOH A 77 1877 142 HOH HOH . J 4 HOH B 1 1801 159 HOH HOH . J 4 HOH B 2 1802 146 HOH HOH . J 4 HOH B 3 1803 57 HOH HOH . J 4 HOH B 4 1804 8 HOH HOH . J 4 HOH B 5 1805 78 HOH HOH . J 4 HOH B 6 1806 120 HOH HOH . J 4 HOH B 7 1807 37 HOH HOH . J 4 HOH B 8 1808 128 HOH HOH . J 4 HOH B 9 1809 150 HOH HOH . J 4 HOH B 10 1810 59 HOH HOH . J 4 HOH B 11 1811 151 HOH HOH . J 4 HOH B 12 1812 114 HOH HOH . J 4 HOH B 13 1813 163 HOH HOH . J 4 HOH B 14 1814 62 HOH HOH . J 4 HOH B 15 1815 35 HOH HOH . J 4 HOH B 16 1816 73 HOH HOH . J 4 HOH B 17 1817 145 HOH HOH . J 4 HOH B 18 1818 84 HOH HOH . J 4 HOH B 19 1819 9 HOH HOH . J 4 HOH B 20 1820 34 HOH HOH . J 4 HOH B 21 1821 63 HOH HOH . J 4 HOH B 22 1822 115 HOH HOH . J 4 HOH B 23 1823 28 HOH HOH . J 4 HOH B 24 1824 15 HOH HOH . J 4 HOH B 25 1825 36 HOH HOH . J 4 HOH B 26 1826 96 HOH HOH . J 4 HOH B 27 1827 87 HOH HOH . J 4 HOH B 28 1828 31 HOH HOH . J 4 HOH B 29 1829 158 HOH HOH . J 4 HOH B 30 1830 6 HOH HOH . J 4 HOH B 31 1831 14 HOH HOH . J 4 HOH B 32 1832 123 HOH HOH . J 4 HOH B 33 1833 32 HOH HOH . J 4 HOH B 34 1834 144 HOH HOH . J 4 HOH B 35 1835 79 HOH HOH . J 4 HOH B 36 1836 4 HOH HOH . J 4 HOH B 37 1837 26 HOH HOH . J 4 HOH B 38 1838 155 HOH HOH . J 4 HOH B 39 1839 65 HOH HOH . J 4 HOH B 40 1840 39 HOH HOH . J 4 HOH B 41 1841 91 HOH HOH . J 4 HOH B 42 1842 86 HOH HOH . J 4 HOH B 43 1843 17 HOH HOH . J 4 HOH B 44 1844 5 HOH HOH . J 4 HOH B 45 1845 127 HOH HOH . J 4 HOH B 46 1846 116 HOH HOH . J 4 HOH B 47 1847 90 HOH HOH . J 4 HOH B 48 1848 149 HOH HOH . J 4 HOH B 49 1849 148 HOH HOH . J 4 HOH B 50 1850 66 HOH HOH . J 4 HOH B 51 1851 33 HOH HOH . J 4 HOH B 52 1852 83 HOH HOH . J 4 HOH B 53 1853 3 HOH HOH . J 4 HOH B 54 1854 20 HOH HOH . J 4 HOH B 55 1855 22 HOH HOH . J 4 HOH B 56 1856 92 HOH HOH . J 4 HOH B 57 1857 46 HOH HOH . J 4 HOH B 58 1858 143 HOH HOH . J 4 HOH B 59 1859 88 HOH HOH . J 4 HOH B 60 1860 29 HOH HOH . J 4 HOH B 61 1861 118 HOH HOH . J 4 HOH B 62 1862 80 HOH HOH . J 4 HOH B 63 1863 7 HOH HOH . J 4 HOH B 64 1864 119 HOH HOH . J 4 HOH B 65 1865 112 HOH HOH . J 4 HOH B 66 1866 21 HOH HOH . J 4 HOH B 67 1867 58 HOH HOH . J 4 HOH B 68 1868 106 HOH HOH . J 4 HOH B 69 1869 48 HOH HOH . J 4 HOH B 70 1870 147 HOH HOH . J 4 HOH B 71 1871 156 HOH HOH . J 4 HOH B 72 1872 160 HOH HOH . J 4 HOH B 73 1873 152 HOH HOH . J 4 HOH B 74 1874 40 HOH HOH . J 4 HOH B 75 1875 69 HOH HOH . J 4 HOH B 76 1876 108 HOH HOH . J 4 HOH B 77 1877 117 HOH HOH . J 4 HOH B 78 1878 64 HOH HOH . J 4 HOH B 79 1879 113 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 QXY . . . F 2 1.99 -27.174 32.384 1 33.27 ? C4 QXY 1701 B 1 HETATM 2 C C5 QXY . . . F 2 0.699 -26.613 32.856 1 30.4 ? C5 QXY 1701 B 1 HETATM 3 C C6 QXY . . . F 2 4.099 -26.099 32.836 1 42.83 ? C6 QXY 1701 B 1 HETATM 4 N N1 QXY . . . F 2 2.932 -26.08 32.158 1 36.23 ? N1 QXY 1701 B 1 HETATM 5 C C7 QXY . . . F 2 5.111 -25.04 32.571 1 47.41 ? C7 QXY 1701 B 1 HETATM 6 C C8 QXY . . . F 2 5.475 -24.172 33.593 1 50.54 ? C8 QXY 1701 B 1 HETATM 7 N N2 QXY . . . F 2 7.655 -21.006 31.104 1 61.98 ? N2 QXY 1701 B 1 HETATM 8 C C9 QXY . . . F 2 6.468 -23.234 33.398 1 55.17 ? C9 QXY 1701 B 1 HETATM 9 C C10 QXY . . . F 2 7.133 -23.142 32.187 1 56.33 ? C10 QXY 1701 B 1 HETATM 10 C C11 QXY . . . F 2 8.169 -22.069 31.964 1 61.96 ? C11 QXY 1701 B 1 HETATM 11 C C12 QXY . . . F 2 7.114 -19.813 31.456 1 61.32 ? C12 QXY 1701 B 1 HETATM 12 N N3 QXY . . . F 2 7.557 -21.242 29.767 1 64.32 ? N3 QXY 1701 B 1 HETATM 13 C C13 QXY . . . F 2 7.111 -19.296 32.857 1 61.43 ? C13 QXY 1701 B 1 HETATM 14 C C14 QXY . . . F 2 6.628 -19.268 30.303 1 61.92 ? C14 QXY 1701 B 1 HETATM 15 C C15 QXY . . . F 2 6.917 -20.188 29.285 1 63.37 ? C15 QXY 1701 B 1 HETATM 16 O O QXY . . . F 2 4.365 -26.977 33.641 1 41.31 ? O QXY 1701 B 1 HETATM 17 C C3 QXY . . . F 2 2.407 -25.123 31.174 1 33.19 ? C3 QXY 1701 B 1 HETATM 18 C C2 QXY . . . F 2 1.03 -24.628 31.596 1 32.6 ? C2 QXY 1701 B 1 HETATM 19 N N QXY . . . F 2 0.119 -25.757 31.827 1 29.39 ? N QXY 1701 B 1 HETATM 20 C C1 QXY . . . F 2 -1.191 -25.302 32.29 1 29.35 ? C1 QXY 1701 B 1 HETATM 21 C C QXY . . . F 2 -1.963 -24.466 31.332 1 29.15 ? C QXY 1701 B 1 HETATM 22 C C18 QXY . . . F 2 5.773 -24.947 31.352 1 51.15 ? C18 QXY 1701 B 1 HETATM 23 C C17 QXY . . . F 2 6.776 -24.013 31.168 1 53.64 ? C17 QXY 1701 B 1 HETATM 24 C C16 QXY . . . F 2 6.545 -20.135 27.841 1 64.94 ? C16 QXY 1701 B 1 # _model_server_stats.io_time_ms 51 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 277 _model_server_stats.encode_time_ms 5 _model_server_stats.element_count 24 #