data_6VIZ # _model_server_result.job_id AwxGTEePlVWtmtJH6LZ4Og _model_server_result.datetime_utc '2024-11-24 18:30:30' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6viz # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":201}' # _entry.id 6VIZ # _exptl.entry_id 6VIZ _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 507.601 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 4-[2-(2,6-dimethylphenoxy)-5-(ethylsulfonyl)phenyl]-N-ethyl-6-methyl-7-oxo-6,7-dihydro-1H-pyrrolo[2,3-c]pyridine-2-carboxamide _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6VIZ _cell.length_a 141.43 _cell.length_b 141.43 _cell.length_c 134.05 _cell.Z_PDB 36 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6VIZ _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 61 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,D,G 1 1 B,E,H 2 1 C,F,I 3 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 D N N ? 2 E N N ? 2 F N N # _chem_comp.formula 'C27 H29 N3 O5 S' _chem_comp.formula_weight 507.601 _chem_comp.id QYY _chem_comp.mon_nstd_flag . _chem_comp.name 4-[2-(2,6-dimethylphenoxy)-5-(ethylsulfonyl)phenyl]-N-ethyl-6-methyl-7-oxo-6,7-dihydro-1H-pyrrolo[2,3-c]pyridine-2-carboxamide _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O34 S36 QYY doub 277 n n O33 S36 QYY doub 278 n n S36 C27 QYY sing 279 n n S36 C14 QYY sing 280 n n C27 C24 QYY sing 281 n n C14 C5 QYY doub 282 n y C14 C6 QYY sing 283 n y C5 C4 QYY sing 284 n y C6 C8 QYY doub 285 n y C4 C12 QYY doub 286 n y C8 C12 QYY sing 287 n y C8 C18 QYY sing 288 n n C12 O35 QYY sing 289 n n C18 C9 QYY sing 290 n n C18 C17 QYY doub 291 n n O32 C20 QYY doub 292 n n C7 C9 QYY sing 293 n y C7 C16 QYY doub 294 n y C22 C11 QYY sing 295 n n C9 C15 QYY doub 296 n y C17 N29 QYY sing 297 n n C20 C16 QYY sing 298 n n C20 N30 QYY sing 299 n n C16 N28 QYY sing 300 n y C15 N28 QYY sing 301 n y C15 C19 QYY sing 302 n n N29 C19 QYY sing 303 n n N29 C25 QYY sing 304 n n N30 C26 QYY sing 305 n n C19 O31 QYY doub 306 n n C26 C23 QYY sing 307 n n O35 C13 QYY sing 308 n n C11 C13 QYY doub 309 n y C11 C3 QYY sing 310 n y C13 C10 QYY sing 311 n y C3 C1 QYY doub 312 n y C10 C21 QYY sing 313 n n C10 C2 QYY doub 314 n y C1 C2 QYY sing 315 n y C4 H1 QYY sing 316 n n C5 H2 QYY sing 317 n n C6 H3 QYY sing 318 n n C7 H4 QYY sing 319 n n C17 H5 QYY sing 320 n n C21 H6 QYY sing 321 n n C21 H7 QYY sing 322 n n C21 H8 QYY sing 323 n n C22 H9 QYY sing 324 n n C22 H10 QYY sing 325 n n C22 H11 QYY sing 326 n n C24 H12 QYY sing 327 n n C24 H13 QYY sing 328 n n C24 H14 QYY sing 329 n n C26 H15 QYY sing 330 n n C26 H16 QYY sing 331 n n C1 H17 QYY sing 332 n n C2 H18 QYY sing 333 n n C3 H19 QYY sing 334 n n C23 H20 QYY sing 335 n n C23 H21 QYY sing 336 n n C23 H22 QYY sing 337 n n C25 H23 QYY sing 338 n n C25 H24 QYY sing 339 n n C25 H25 QYY sing 340 n n C27 H26 QYY sing 341 n n C27 H27 QYY sing 342 n n N28 H28 QYY sing 343 n n N30 H29 QYY sing 344 n n # _atom_sites.entry_id 6VIZ _atom_sites.fract_transf_matrix[1][1] 0.007071 _atom_sites.fract_transf_matrix[1][2] 0.004082 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.008164 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.00746 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 QYY A 1 201 1 QYY LIG . E 2 QYY B 1 201 1 QYY LIG . F 2 QYY C 1 201 1 QYY LIG . G 3 HOH A 1 301 92 HOH HOH . G 3 HOH A 2 302 115 HOH HOH . G 3 HOH A 3 303 134 HOH HOH . G 3 HOH A 4 304 83 HOH HOH . G 3 HOH A 5 305 118 HOH HOH . G 3 HOH A 6 306 117 HOH HOH . G 3 HOH A 7 307 186 HOH HOH . G 3 HOH A 8 308 121 HOH HOH . G 3 HOH A 9 309 116 HOH HOH . G 3 HOH A 10 310 82 HOH HOH . G 3 HOH A 11 311 139 HOH HOH . G 3 HOH A 12 312 77 HOH HOH . G 3 HOH A 13 313 161 HOH HOH . G 3 HOH A 14 314 136 HOH HOH . G 3 HOH A 15 315 14 HOH HOH . G 3 HOH A 16 316 126 HOH HOH . G 3 HOH A 17 317 220 HOH HOH . G 3 HOH A 18 318 123 HOH HOH . G 3 HOH A 19 319 19 HOH HOH . G 3 HOH A 20 320 64 HOH HOH . G 3 HOH A 21 321 44 HOH HOH . G 3 HOH A 22 322 133 HOH HOH . G 3 HOH A 23 323 42 HOH HOH . G 3 HOH A 24 324 26 HOH HOH . G 3 HOH A 25 325 22 HOH HOH . G 3 HOH A 26 326 23 HOH HOH . G 3 HOH A 27 327 3 HOH HOH . G 3 HOH A 28 328 28 HOH HOH . G 3 HOH A 29 329 47 HOH HOH . G 3 HOH A 30 330 147 HOH HOH . G 3 HOH A 31 331 145 HOH HOH . G 3 HOH A 32 332 120 HOH HOH . G 3 HOH A 33 333 217 HOH HOH . G 3 HOH A 34 334 87 HOH HOH . G 3 HOH A 35 335 140 HOH HOH . G 3 HOH A 36 336 39 HOH HOH . G 3 HOH A 37 337 51 HOH HOH . G 3 HOH A 38 338 203 HOH HOH . G 3 HOH A 39 339 97 HOH HOH . G 3 HOH A 40 340 175 HOH HOH . G 3 HOH A 41 341 137 HOH HOH . G 3 HOH A 42 342 127 HOH HOH . G 3 HOH A 43 343 189 HOH HOH . G 3 HOH A 44 344 106 HOH HOH . G 3 HOH A 45 345 35 HOH HOH . G 3 HOH A 46 346 131 HOH HOH . G 3 HOH A 47 347 199 HOH HOH . G 3 HOH A 48 348 216 HOH HOH . G 3 HOH A 49 349 212 HOH HOH . G 3 HOH A 50 350 170 HOH HOH . G 3 HOH A 51 351 152 HOH HOH . G 3 HOH A 52 352 154 HOH HOH . G 3 HOH A 53 353 156 HOH HOH . G 3 HOH A 54 354 104 HOH HOH . G 3 HOH A 55 355 54 HOH HOH . G 3 HOH A 56 356 68 HOH HOH . G 3 HOH A 57 357 1 HOH HOH . G 3 HOH A 58 358 185 HOH HOH . G 3 HOH A 59 359 101 HOH HOH . G 3 HOH A 60 360 73 HOH HOH . G 3 HOH A 61 361 195 HOH HOH . G 3 HOH A 62 362 63 HOH HOH . G 3 HOH A 63 363 129 HOH HOH . G 3 HOH A 64 364 90 HOH HOH . G 3 HOH A 65 365 159 HOH HOH . G 3 HOH A 66 366 50 HOH HOH . H 3 HOH B 1 301 109 HOH HOH . H 3 HOH B 2 302 25 HOH HOH . H 3 HOH B 3 303 181 HOH HOH . H 3 HOH B 4 304 150 HOH HOH . H 3 HOH B 5 305 21 HOH HOH . H 3 HOH B 6 306 79 HOH HOH . H 3 HOH B 7 307 80 HOH HOH . H 3 HOH B 8 308 57 HOH HOH . H 3 HOH B 9 309 37 HOH HOH . H 3 HOH B 10 310 85 HOH HOH . H 3 HOH B 11 311 86 HOH HOH . H 3 HOH B 12 312 221 HOH HOH . H 3 HOH B 13 313 16 HOH HOH . H 3 HOH B 14 314 55 HOH HOH . H 3 HOH B 15 315 81 HOH HOH . H 3 HOH B 16 316 132 HOH HOH . H 3 HOH B 17 317 15 HOH HOH . H 3 HOH B 18 318 164 HOH HOH . H 3 HOH B 19 319 100 HOH HOH . H 3 HOH B 20 320 29 HOH HOH . H 3 HOH B 21 321 52 HOH HOH . H 3 HOH B 22 322 17 HOH HOH . H 3 HOH B 23 323 49 HOH HOH . H 3 HOH B 24 324 65 HOH HOH . H 3 HOH B 25 325 69 HOH HOH . H 3 HOH B 26 326 18 HOH HOH . H 3 HOH B 27 327 60 HOH HOH . H 3 HOH B 28 328 141 HOH HOH . H 3 HOH B 29 329 38 HOH HOH . H 3 HOH B 30 330 70 HOH HOH . H 3 HOH B 31 331 71 HOH HOH . H 3 HOH B 32 332 169 HOH HOH . H 3 HOH B 33 333 43 HOH HOH . H 3 HOH B 34 334 113 HOH HOH . H 3 HOH B 35 335 168 HOH HOH . H 3 HOH B 36 336 6 HOH HOH . H 3 HOH B 37 337 183 HOH HOH . H 3 HOH B 38 338 214 HOH HOH . H 3 HOH B 39 339 193 HOH HOH . H 3 HOH B 40 340 4 HOH HOH . H 3 HOH B 41 341 41 HOH HOH . H 3 HOH B 42 342 66 HOH HOH . H 3 HOH B 43 343 32 HOH HOH . H 3 HOH B 44 344 144 HOH HOH . H 3 HOH B 45 345 58 HOH HOH . H 3 HOH B 46 346 188 HOH HOH . H 3 HOH B 47 347 7 HOH HOH . H 3 HOH B 48 348 88 HOH HOH . H 3 HOH B 49 349 157 HOH HOH . H 3 HOH B 50 350 89 HOH HOH . I 3 HOH C 1 301 12 HOH HOH . I 3 HOH C 2 302 111 HOH HOH . I 3 HOH C 3 303 119 HOH HOH . I 3 HOH C 4 304 78 HOH HOH . I 3 HOH C 5 305 5 HOH HOH . I 3 HOH C 6 306 128 HOH HOH . I 3 HOH C 7 307 72 HOH HOH . I 3 HOH C 8 308 10 HOH HOH . I 3 HOH C 9 309 180 HOH HOH . I 3 HOH C 10 310 182 HOH HOH . I 3 HOH C 11 311 135 HOH HOH . I 3 HOH C 12 312 200 HOH HOH . I 3 HOH C 13 313 124 HOH HOH . I 3 HOH C 14 314 103 HOH HOH . I 3 HOH C 15 315 125 HOH HOH . I 3 HOH C 16 316 84 HOH HOH . I 3 HOH C 17 317 8 HOH HOH . I 3 HOH C 18 318 30 HOH HOH . I 3 HOH C 19 319 196 HOH HOH . I 3 HOH C 20 320 130 HOH HOH . I 3 HOH C 21 321 95 HOH HOH . I 3 HOH C 22 322 76 HOH HOH . I 3 HOH C 23 323 110 HOH HOH . I 3 HOH C 24 324 59 HOH HOH . I 3 HOH C 25 325 143 HOH HOH . I 3 HOH C 26 326 31 HOH HOH . I 3 HOH C 27 327 102 HOH HOH . I 3 HOH C 28 328 27 HOH HOH . I 3 HOH C 29 329 46 HOH HOH . I 3 HOH C 30 330 61 HOH HOH . I 3 HOH C 31 331 13 HOH HOH . I 3 HOH C 32 332 197 HOH HOH . I 3 HOH C 33 333 211 HOH HOH . I 3 HOH C 34 334 20 HOH HOH . I 3 HOH C 35 335 148 HOH HOH . I 3 HOH C 36 336 146 HOH HOH . I 3 HOH C 37 337 94 HOH HOH . I 3 HOH C 38 338 153 HOH HOH . I 3 HOH C 39 339 151 HOH HOH . I 3 HOH C 40 340 33 HOH HOH . I 3 HOH C 41 341 112 HOH HOH . I 3 HOH C 42 342 40 HOH HOH . I 3 HOH C 43 343 166 HOH HOH . I 3 HOH C 44 344 205 HOH HOH . I 3 HOH C 45 345 215 HOH HOH . I 3 HOH C 46 346 105 HOH HOH . I 3 HOH C 47 347 209 HOH HOH . I 3 HOH C 48 348 138 HOH HOH . I 3 HOH C 49 349 53 HOH HOH . I 3 HOH C 50 350 108 HOH HOH . I 3 HOH C 51 351 11 HOH HOH . I 3 HOH C 52 352 213 HOH HOH . I 3 HOH C 53 353 75 HOH HOH . I 3 HOH C 54 354 202 HOH HOH . I 3 HOH C 55 355 34 HOH HOH . I 3 HOH C 56 356 45 HOH HOH . I 3 HOH C 57 357 158 HOH HOH . I 3 HOH C 58 358 178 HOH HOH . I 3 HOH C 59 359 114 HOH HOH . I 3 HOH C 60 360 67 HOH HOH . I 3 HOH C 61 361 177 HOH HOH . I 3 HOH C 62 362 93 HOH HOH . I 3 HOH C 63 363 91 HOH HOH . I 3 HOH C 64 364 167 HOH HOH . I 3 HOH C 65 365 194 HOH HOH . I 3 HOH C 66 366 184 HOH HOH . I 3 HOH C 67 367 96 HOH HOH . I 3 HOH C 68 368 24 HOH HOH . I 3 HOH C 69 369 2 HOH HOH . I 3 HOH C 70 370 174 HOH HOH . I 3 HOH C 71 371 56 HOH HOH . I 3 HOH C 72 372 9 HOH HOH . I 3 HOH C 73 373 74 HOH HOH . I 3 HOH C 74 374 99 HOH HOH . I 3 HOH C 75 375 176 HOH HOH . I 3 HOH C 76 376 122 HOH HOH . I 3 HOH C 77 377 62 HOH HOH . I 3 HOH C 78 378 36 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C4 QYY . . . D 2 -61.529 26.341 5.79 1 60 ? C4 QYY 201 A 1 HETATM 2 C C5 QYY . . . D 2 -60.659 26.331 4.727 1 61.33 ? C5 QYY 201 A 1 HETATM 3 C C6 QYY . . . D 2 -60.617 28.752 4.756 1 61.03 ? C6 QYY 201 A 1 HETATM 4 C C7 QYY . . . D 2 -64.487 29.78 6.349 1 58.9 ? C7 QYY 201 A 1 HETATM 5 C C8 QYY . . . D 2 -61.499 28.773 5.808 1 59.58 ? C8 QYY 201 A 1 HETATM 6 C C10 QYY . . . D 2 -62.587 26.164 9.218 1 52.87 ? C10 QYY 201 A 1 HETATM 7 C C13 QYY . . . D 2 -63.232 26.473 8.036 1 53.62 ? C13 QYY 201 A 1 HETATM 8 C C15 QYY . . . D 2 -63.557 31.768 6.94 1 58.64 ? C15 QYY 201 A 1 HETATM 9 C C17 QYY . . . D 2 -60.988 30.998 6.593 1 58.83 ? C17 QYY 201 A 1 HETATM 10 C C20 QYY . . . D 2 -66.895 30.357 6.66 1 59.69 ? C20 QYY 201 A 1 HETATM 11 C C21 QYY . . . D 2 -61.413 26.967 9.678 1 52.55 ? C21 QYY 201 A 1 HETATM 12 C C22 QYY . . . D 2 -65.076 26.132 6.362 1 51.93 ? C22 QYY 201 A 1 HETATM 13 C C24 QYY . . . D 2 -56.692 27.802 3.985 1 66.41 ? C24 QYY 201 A 1 HETATM 14 C C26 QYY . . . D 2 -69.121 31.158 7.217 1 60.04 ? C26 QYY 201 A 1 HETATM 15 C C1 QYY . . . D 2 -64.111 24.35 9.519 1 51.49 ? C1 QYY 201 A 1 HETATM 16 C C2 QYY . . . D 2 -63.013 25.072 9.944 1 52.17 ? C2 QYY 201 A 1 HETATM 17 C C3 QYY . . . D 2 -64.786 24.697 8.369 1 51.38 ? C3 QYY 201 A 1 HETATM 18 C C9 QYY . . . D 2 -63.275 30.493 6.514 1 58.97 ? C9 QYY 201 A 1 HETATM 19 C C11 QYY . . . D 2 -64.345 25.765 7.615 1 52.33 ? C11 QYY 201 A 1 HETATM 20 C C12 QYY . . . D 2 -61.938 27.557 6.311 1 58.62 ? C12 QYY 201 A 1 HETATM 21 C C14 QYY . . . D 2 -60.211 27.542 4.239 1 62.81 ? C14 QYY 201 A 1 HETATM 22 C C16 QYY . . . D 2 -65.502 30.658 6.666 1 59.05 ? C16 QYY 201 A 1 HETATM 23 C C18 QYY . . . D 2 -61.935 30.086 6.323 1 59.14 ? C18 QYY 201 A 1 HETATM 24 C C19 QYY . . . D 2 -62.558 32.772 7.215 1 58.25 ? C19 QYY 201 A 1 HETATM 25 C C23 QYY . . . D 2 -69.731 32.277 8.033 1 60.27 ? C23 QYY 201 A 1 HETATM 26 C C25 QYY . . . D 2 -60.163 33.172 7.286 1 57.82 ? C25 QYY 201 A 1 HETATM 27 C C27 QYY . . . D 2 -57.761 28.622 3.324 1 65.89 ? C27 QYY 201 A 1 HETATM 28 N N28 QYY . . . D 2 -64.921 31.852 7.016 1 58.44 ? N28 QYY 201 A 1 HETATM 29 N N29 QYY . . . D 2 -61.267 32.281 7.046 1 58.43 ? N29 QYY 201 A 1 HETATM 30 N N30 QYY . . . D 2 -67.704 31.373 7.075 1 59.83 ? N30 QYY 201 A 1 HETATM 31 O O31 QYY . . . D 2 -62.803 33.917 7.573 1 57.13 ? O31 QYY 201 A 1 HETATM 32 O O32 QYY . . . D 2 -67.319 29.257 6.343 1 60.42 ? O32 QYY 201 A 1 HETATM 33 O O33 QYY . . . D 2 -58.666 26.187 2.756 1 65.69 ? O33 QYY 201 A 1 HETATM 34 O O34 QYY . . . D 2 -59.775 28.257 1.765 1 65.64 ? O34 QYY 201 A 1 HETATM 35 O O35 QYY . . . D 2 -62.828 27.615 7.366 1 55.82 ? O35 QYY 201 A 1 HETATM 36 S S36 QYY . . . D 2 -59.099 27.556 2.848 1 65.15 ? S36 QYY 201 A 1 # _model_server_stats.io_time_ms 7 _model_server_stats.parse_time_ms 7 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 215 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 36 #