data_6VKA # _model_server_result.job_id LQzUKL_zVTgVPNTrK7BOjQ _model_server_result.datetime_utc '2024-11-22 19:34:55' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6vka # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"J","auth_seq_id":308}' # _entry.id 6VKA # _exptl.entry_id 6VKA _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 4 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 10 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6VKA _cell.length_a 46.302 _cell.length_b 46.302 _cell.length_c 138.051 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6VKA _symmetry.cell_setting ? _symmetry.Int_Tables_number 78 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 43' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 4 F N N ? 4 G N N ? 4 H N N ? 4 I N N ? 4 J N N ? 4 N N N ? 4 O N N ? 4 P N N ? 4 Q N N ? 4 R N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale ? covale1 A C ASP 17 A ASP 64 1_555 A N CSO 18 A CSO 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale2 A C CSO 18 A CSO 65 1_555 A N THR 19 A THR 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.333 ? covale ? covale3 B C ASP 17 B ASP 64 1_555 B N CSO 18 B CSO 65 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.329 ? covale ? covale4 B C CSO 18 B CSO 65 1_555 B N THR 19 B THR 66 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.319 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 407 n n S O2 SO4 doub 408 n n S O3 SO4 sing 409 n n S O4 SO4 sing 410 n n # _atom_sites.entry_id 6VKA _atom_sites.fract_transf_matrix[1][1] 0.021597 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.021597 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.007244 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 IOD A 1 301 1 IOD IOD . D 2 IOD A 1 302 3 IOD IOD . E 3 QZV A 1 303 1 QZV LIG . F 4 SO4 A 1 304 3 SO4 SO4 . G 4 SO4 A 1 305 5 SO4 SO4 . H 4 SO4 A 1 306 10 SO4 SO4 . I 4 SO4 A 1 307 11 SO4 SO4 . J 4 SO4 A 1 308 15 SO4 SO4 . K 2 IOD A 1 309 5 IOD IOD . L 2 IOD B 1 301 2 IOD IOD . M 2 IOD B 1 302 4 IOD IOD . N 4 SO4 B 1 303 6 SO4 SO4 . O 4 SO4 B 1 304 7 SO4 SO4 . P 4 SO4 B 1 305 9 SO4 SO4 . Q 4 SO4 B 1 306 12 SO4 SO4 . R 4 SO4 B 1 307 13 SO4 SO4 . S 2 IOD B 1 308 6 IOD IOD . T 5 HOH A 1 401 2 HOH HOH . T 5 HOH A 2 402 36 HOH HOH . T 5 HOH A 3 403 101 HOH HOH . T 5 HOH A 4 404 27 HOH HOH . T 5 HOH A 5 405 97 HOH HOH . T 5 HOH A 6 406 49 HOH HOH . T 5 HOH A 7 407 4 HOH HOH . T 5 HOH A 8 408 38 HOH HOH . T 5 HOH A 9 409 30 HOH HOH . T 5 HOH A 10 410 25 HOH HOH . T 5 HOH A 11 411 100 HOH HOH . T 5 HOH A 12 412 55 HOH HOH . T 5 HOH A 13 413 69 HOH HOH . T 5 HOH A 14 414 12 HOH HOH . T 5 HOH A 15 415 11 HOH HOH . T 5 HOH A 16 416 8 HOH HOH . T 5 HOH A 17 417 54 HOH HOH . T 5 HOH A 18 418 67 HOH HOH . T 5 HOH A 19 419 31 HOH HOH . T 5 HOH A 20 420 15 HOH HOH . T 5 HOH A 21 421 85 HOH HOH . T 5 HOH A 22 422 62 HOH HOH . T 5 HOH A 23 423 33 HOH HOH . T 5 HOH A 24 424 9 HOH HOH . T 5 HOH A 25 425 58 HOH HOH . T 5 HOH A 26 426 63 HOH HOH . T 5 HOH A 27 427 92 HOH HOH . T 5 HOH A 28 428 3 HOH HOH . T 5 HOH A 29 429 154 HOH HOH . T 5 HOH A 30 430 143 HOH HOH . T 5 HOH A 31 431 152 HOH HOH . T 5 HOH A 32 432 60 HOH HOH . T 5 HOH A 33 433 28 HOH HOH . T 5 HOH A 34 434 76 HOH HOH . T 5 HOH A 35 435 13 HOH HOH . T 5 HOH A 36 436 156 HOH HOH . T 5 HOH A 37 437 56 HOH HOH . T 5 HOH A 38 438 155 HOH HOH . T 5 HOH A 39 439 144 HOH HOH . T 5 HOH A 40 440 29 HOH HOH . T 5 HOH A 41 441 37 HOH HOH . T 5 HOH A 42 442 80 HOH HOH . T 5 HOH A 43 443 18 HOH HOH . T 5 HOH A 44 444 150 HOH HOH . T 5 HOH A 45 445 153 HOH HOH . T 5 HOH A 46 446 139 HOH HOH . T 5 HOH A 47 447 17 HOH HOH . T 5 HOH A 48 448 149 HOH HOH . T 5 HOH A 49 449 137 HOH HOH . T 5 HOH A 50 450 113 HOH HOH . T 5 HOH A 51 451 151 HOH HOH . U 5 HOH B 1 401 21 HOH HOH . U 5 HOH B 2 402 34 HOH HOH . U 5 HOH B 3 403 91 HOH HOH . U 5 HOH B 4 404 65 HOH HOH . U 5 HOH B 5 405 7 HOH HOH . U 5 HOH B 6 406 104 HOH HOH . U 5 HOH B 7 407 6 HOH HOH . U 5 HOH B 8 408 47 HOH HOH . U 5 HOH B 9 409 157 HOH HOH . U 5 HOH B 10 410 5 HOH HOH . U 5 HOH B 11 411 22 HOH HOH . U 5 HOH B 12 412 99 HOH HOH . U 5 HOH B 13 413 16 HOH HOH . U 5 HOH B 14 414 14 HOH HOH . U 5 HOH B 15 415 46 HOH HOH . U 5 HOH B 16 416 45 HOH HOH . U 5 HOH B 17 417 20 HOH HOH . U 5 HOH B 18 418 53 HOH HOH . U 5 HOH B 19 419 19 HOH HOH . U 5 HOH B 20 420 42 HOH HOH . U 5 HOH B 21 421 103 HOH HOH . U 5 HOH B 22 422 86 HOH HOH . U 5 HOH B 23 423 51 HOH HOH . U 5 HOH B 24 424 79 HOH HOH . U 5 HOH B 25 425 59 HOH HOH . U 5 HOH B 26 426 114 HOH HOH . U 5 HOH B 27 427 127 HOH HOH . U 5 HOH B 28 428 24 HOH HOH . U 5 HOH B 29 429 10 HOH HOH . U 5 HOH B 30 430 90 HOH HOH . U 5 HOH B 31 431 102 HOH HOH . U 5 HOH B 32 432 145 HOH HOH . U 5 HOH B 33 433 66 HOH HOH . U 5 HOH B 34 434 64 HOH HOH . U 5 HOH B 35 435 23 HOH HOH . U 5 HOH B 36 436 75 HOH HOH . U 5 HOH B 37 437 111 HOH HOH . U 5 HOH B 38 438 121 HOH HOH . U 5 HOH B 39 439 41 HOH HOH . U 5 HOH B 40 440 105 HOH HOH . U 5 HOH B 41 441 147 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . J 4 7.824 17.677 -15.722 1 22.48 ? S SO4 308 A 1 HETATM 2 O O1 SO4 . . . J 4 8.565 17.784 -16.986 1 55.37 ? O1 SO4 308 A 1 HETATM 3 O O2 SO4 . . . J 4 6.489 17.187 -16.052 1 38.08 ? O2 SO4 308 A 1 HETATM 4 O O3 SO4 . . . J 4 8.541 16.764 -14.867 1 33.2 ? O3 SO4 308 A 1 HETATM 5 O O4 SO4 . . . J 4 7.699 18.996 -15.115 1 35.75 ? O4 SO4 308 A 1 # _model_server_stats.io_time_ms 9 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 275 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 5 #