data_6VLT # _model_server_result.job_id fSfS3GBveee1h2lJLekxgw _model_server_result.datetime_utc '2024-12-02 20:44:40' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6vlt # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"U","auth_seq_id":505}' # _entry.id 6VLT # _exptl.entry_id 6VLT _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 96.063 _entity.id 5 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'SULFATE ION' _entity.pdbx_number_of_molecules 3 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6VLT _cell.length_a 238.1 _cell.length_b 238.1 _cell.length_c 109.851 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6VLT _symmetry.cell_setting ? _symmetry.Int_Tables_number 144 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 PISA monomeric 1 author_and_software_defined_assembly 3 PISA monomeric 1 author_and_software_defined_assembly 4 PISA monomeric 1 author_and_software_defined_assembly 5 PISA monomeric 1 author_and_software_defined_assembly 6 PISA monomeric 1 author_and_software_defined_assembly 7 PISA monomeric 1 author_and_software_defined_assembly 8 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,I,J,JA 1 1 B,K,L,KA 2 1 C,M,N,LA 3 1 D,O,P,MA 4 1 E,Q,R,S,T,U,NA 5 1 F,V,W,X,Y,Z,OA 6 1 G,AA,BA,CA,DA,EA,PA 7 1 H,FA,GA,HA,IA,QA 8 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 5 U N N ? 5 Z N N ? 5 EA N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 417 A CYS 435 1_555 I FE HEM . A HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.236 ? metalc ? metalc2 B SG CYS 417 B CYS 435 1_555 K FE HEM . B HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.209 ? metalc ? metalc3 C SG CYS 417 C CYS 435 1_555 M FE HEM . C HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.216 ? metalc ? metalc4 D SG CYS 417 D CYS 435 1_555 O FE HEM . D HEM 501 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.231 ? metalc ? metalc5 E SG CYS 417 E CYS 435 1_555 R FE HEM . E HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.21 ? metalc ? metalc6 F SG CYS 417 F CYS 435 1_555 W FE HEM . F HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? metalc ? metalc7 G SG CYS 417 G CYS 435 1_555 BA FE HEM . G HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.229 ? metalc ? metalc8 H SG CYS 417 H CYS 435 1_555 GA FE HEM . H HEM 502 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.233 ? # _chem_comp.formula 'O4 S -2' _chem_comp.formula_weight 96.063 _chem_comp.id SO4 _chem_comp.mon_nstd_flag . _chem_comp.name 'SULFATE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag S O1 SO4 doub 506 n n S O2 SO4 doub 507 n n S O3 SO4 sing 508 n n S O4 SO4 sing 509 n n # _atom_sites.entry_id 6VLT _atom_sites.fract_transf_matrix[1][1] 0.0042 _atom_sites.fract_transf_matrix[1][2] 0.002425 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.00485 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.009103 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code I 2 HEM A 1 501 501 HEM HEM . J 3 LSN A 1 502 503 LSN LSN . K 2 HEM B 1 501 501 HEM HEM . L 3 LSN B 1 502 503 LSN LSN . M 2 HEM C 1 501 501 HEM HEM . N 3 LSN C 1 502 503 LSN LSN . O 2 HEM D 1 501 501 HEM HEM . P 3 LSN D 1 502 503 LSN LSN . Q 4 CM5 E 1 501 604 CM5 CM5 . R 2 HEM E 1 502 501 HEM HEM . S 3 LSN E 1 503 503 LSN LSN . T 4 CM5 E 1 504 604 CM5 CM5 . U 5 SO4 E 1 505 1 SO4 SO4 . V 4 CM5 F 1 501 604 CM5 CM5 . W 2 HEM F 1 502 501 HEM HEM . X 3 LSN F 1 503 503 LSN LSN . Y 4 CM5 F 1 504 604 CM5 CM5 . Z 5 SO4 F 1 505 2 SO4 SO4 . AA 4 CM5 G 1 501 604 CM5 CM5 . BA 2 HEM G 1 502 501 HEM HEM . CA 3 LSN G 1 503 503 LSN LSN . DA 4 CM5 G 1 504 604 CM5 CM5 . EA 5 SO4 G 1 505 3 SO4 SO4 . FA 4 CM5 H 1 501 604 CM5 CM5 . GA 2 HEM H 1 502 501 HEM HEM . HA 3 LSN H 1 503 503 LSN LSN . IA 4 CM5 H 1 504 604 CM5 CM5 . JA 6 HOH A 1 601 391 HOH HOH . JA 6 HOH A 2 602 260 HOH HOH . JA 6 HOH A 3 603 390 HOH HOH . JA 6 HOH A 4 604 333 HOH HOH . JA 6 HOH A 5 605 493 HOH HOH . JA 6 HOH A 6 606 329 HOH HOH . JA 6 HOH A 7 607 491 HOH HOH . JA 6 HOH A 8 608 261 HOH HOH . JA 6 HOH A 9 609 336 HOH HOH . JA 6 HOH A 10 610 492 HOH HOH . JA 6 HOH A 11 611 503 HOH HOH . JA 6 HOH A 12 612 349 HOH HOH . KA 6 HOH B 1 601 167 HOH HOH . KA 6 HOH B 2 602 191 HOH HOH . KA 6 HOH B 3 603 653 HOH HOH . KA 6 HOH B 4 604 173 HOH HOH . KA 6 HOH B 5 605 163 HOH HOH . KA 6 HOH B 6 606 523 HOH HOH . KA 6 HOH B 7 607 159 HOH HOH . KA 6 HOH B 8 608 172 HOH HOH . KA 6 HOH B 9 609 344 HOH HOH . KA 6 HOH B 10 610 401 HOH HOH . KA 6 HOH B 11 611 165 HOH HOH . KA 6 HOH B 12 612 511 HOH HOH . KA 6 HOH B 13 613 416 HOH HOH . KA 6 HOH B 14 614 189 HOH HOH . KA 6 HOH B 15 615 371 HOH HOH . KA 6 HOH B 16 616 654 HOH HOH . KA 6 HOH B 17 617 417 HOH HOH . KA 6 HOH B 18 618 351 HOH HOH . KA 6 HOH B 19 619 418 HOH HOH . LA 6 HOH C 1 601 270 HOH HOH . LA 6 HOH C 2 602 18 HOH HOH . LA 6 HOH C 3 603 265 HOH HOH . LA 6 HOH C 4 604 23 HOH HOH . LA 6 HOH C 5 605 429 HOH HOH . LA 6 HOH C 6 606 428 HOH HOH . LA 6 HOH C 7 607 664 HOH HOH . LA 6 HOH C 8 608 662 HOH HOH . LA 6 HOH C 9 609 666 HOH HOH . LA 6 HOH C 10 610 532 HOH HOH . LA 6 HOH C 11 611 345 HOH HOH . LA 6 HOH C 12 612 266 HOH HOH . LA 6 HOH C 13 613 210 HOH HOH . LA 6 HOH C 14 614 395 HOH HOH . LA 6 HOH C 15 615 669 HOH HOH . LA 6 HOH C 16 616 433 HOH HOH . LA 6 HOH C 17 617 424 HOH HOH . LA 6 HOH C 18 618 353 HOH HOH . LA 6 HOH C 19 619 435 HOH HOH . LA 6 HOH C 20 620 578 HOH HOH . LA 6 HOH C 21 621 211 HOH HOH . MA 6 HOH D 1 601 40 HOH HOH . MA 6 HOH D 2 602 443 HOH HOH . MA 6 HOH D 3 603 278 HOH HOH . MA 6 HOH D 4 604 545 HOH HOH . MA 6 HOH D 5 605 490 HOH HOH . MA 6 HOH D 6 606 437 HOH HOH . MA 6 HOH D 7 607 672 HOH HOH . MA 6 HOH D 8 608 438 HOH HOH . NA 6 HOH E 1 601 292 HOH HOH . NA 6 HOH E 2 602 675 HOH HOH . NA 6 HOH E 3 603 502 HOH HOH . NA 6 HOH E 4 604 550 HOH HOH . NA 6 HOH E 5 605 563 HOH HOH . NA 6 HOH E 6 606 288 HOH HOH . NA 6 HOH E 7 607 57 HOH HOH . NA 6 HOH E 8 608 567 HOH HOH . NA 6 HOH E 9 609 63 HOH HOH . NA 6 HOH E 10 610 47 HOH HOH . NA 6 HOH E 11 611 566 HOH HOH . NA 6 HOH E 12 612 449 HOH HOH . NA 6 HOH E 13 613 282 HOH HOH . NA 6 HOH E 14 614 234 HOH HOH . NA 6 HOH E 15 615 376 HOH HOH . NA 6 HOH E 16 616 445 HOH HOH . NA 6 HOH E 17 617 284 HOH HOH . NA 6 HOH E 18 618 233 HOH HOH . NA 6 HOH E 19 619 551 HOH HOH . NA 6 HOH E 20 620 375 HOH HOH . NA 6 HOH E 21 621 231 HOH HOH . NA 6 HOH E 22 622 403 HOH HOH . OA 6 HOH F 1 601 80 HOH HOH . OA 6 HOH F 2 602 310 HOH HOH . OA 6 HOH F 3 603 489 HOH HOH . OA 6 HOH F 4 604 69 HOH HOH . OA 6 HOH F 5 605 364 HOH HOH . OA 6 HOH F 6 606 77 HOH HOH . OA 6 HOH F 7 607 135 HOH HOH . OA 6 HOH F 8 608 309 HOH HOH . OA 6 HOH F 9 609 619 HOH HOH . OA 6 HOH F 10 610 459 HOH HOH . OA 6 HOH F 11 611 538 HOH HOH . OA 6 HOH F 12 612 581 HOH HOH . OA 6 HOH F 13 613 575 HOH HOH . OA 6 HOH F 14 614 230 HOH HOH . OA 6 HOH F 15 615 306 HOH HOH . OA 6 HOH F 16 616 585 HOH HOH . OA 6 HOH F 17 617 76 HOH HOH . OA 6 HOH F 18 618 692 HOH HOH . OA 6 HOH F 19 619 576 HOH HOH . OA 6 HOH F 20 620 584 HOH HOH . PA 6 HOH G 1 601 476 HOH HOH . PA 6 HOH G 2 602 140 HOH HOH . PA 6 HOH G 3 603 643 HOH HOH . PA 6 HOH G 4 604 385 HOH HOH . PA 6 HOH G 5 605 175 HOH HOH . PA 6 HOH G 6 606 145 HOH HOH . PA 6 HOH G 7 607 599 HOH HOH . PA 6 HOH G 8 608 467 HOH HOH . PA 6 HOH G 9 609 647 HOH HOH . PA 6 HOH G 10 610 121 HOH HOH . PA 6 HOH G 11 611 347 HOH HOH . PA 6 HOH G 12 612 594 HOH HOH . PA 6 HOH G 13 613 386 HOH HOH . PA 6 HOH G 14 614 461 HOH HOH . PA 6 HOH G 15 615 314 HOH HOH . PA 6 HOH G 16 616 593 HOH HOH . QA 6 HOH H 1 601 482 HOH HOH . QA 6 HOH H 2 602 328 HOH HOH . QA 6 HOH H 3 603 221 HOH HOH . QA 6 HOH H 4 604 426 HOH HOH . QA 6 HOH H 5 605 517 HOH HOH . QA 6 HOH H 6 606 483 HOH HOH . QA 6 HOH H 7 607 92 HOH HOH . QA 6 HOH H 8 608 318 HOH HOH . QA 6 HOH H 9 609 616 HOH HOH . QA 6 HOH H 10 610 84 HOH HOH . QA 6 HOH H 11 611 488 HOH HOH . QA 6 HOH H 12 612 382 HOH HOH . QA 6 HOH H 13 613 367 HOH HOH . QA 6 HOH H 14 614 323 HOH HOH . QA 6 HOH H 15 615 97 HOH HOH . QA 6 HOH H 16 616 625 HOH HOH . QA 6 HOH H 17 617 618 HOH HOH . QA 6 HOH H 18 618 695 HOH HOH . QA 6 HOH H 19 619 322 HOH HOH . QA 6 HOH H 20 620 179 HOH HOH . QA 6 HOH H 21 621 178 HOH HOH . QA 6 HOH H 22 622 86 HOH HOH . QA 6 HOH H 23 623 617 HOH HOH . QA 6 HOH H 24 624 487 HOH HOH . QA 6 HOH H 25 625 341 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 S S SO4 . . . U 5 36.712 15.762 34.907 1 183.53 ? S SO4 505 E 1 HETATM 2 O O1 SO4 . . . U 5 37.478 16.619 34.048 1 181.01 ? O1 SO4 505 E 1 HETATM 3 O O2 SO4 . . . U 5 35.962 14.834 34.108 1 163.61 ? O2 SO4 505 E 1 HETATM 4 O O3 SO4 . . . U 5 37.596 15.042 35.779 1 167.68 ? O3 SO4 505 E 1 HETATM 5 O O4 SO4 . . . U 5 35.811 16.554 35.695 1 183.68 ? O4 SO4 505 E 1 # _model_server_stats.io_time_ms 68 _model_server_stats.parse_time_ms 44 _model_server_stats.create_model_time_ms 173 _model_server_stats.query_time_ms 1316 _model_server_stats.encode_time_ms 8 _model_server_stats.element_count 5 #