data_6VN2 # _model_server_result.job_id mnCIBE-hkHLsjm0Hy-K0Yg _model_server_result.datetime_utc '2024-10-18 04:26:22' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6vn2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":601}' # _entry.id 6VN2 # _exptl.entry_id 6VN2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 510.993 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-({7-[(2R)-5-chloro-2-(piperazine-1-carbonyl)-2,3-dihydro-1-benzofuran-7-yl]thieno[3,2-b]pyridin-2-yl}methyl)-1H-pyrrole-2,5-dione _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.86 _cell.angle_gamma 90 _cell.entry_id 6VN2 _cell.length_a 70.044 _cell.length_b 65.339 _cell.length_c 85.081 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6VN2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,F 1 1 B,E,G 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 110 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 315 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 110 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 315 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.058 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C25 H23 Cl N4 O4 S' _chem_comp.formula_weight 510.993 _chem_comp.id R44 _chem_comp.mon_nstd_flag . _chem_comp.name 1-({7-[(2R)-5-chloro-2-(piperazine-1-carbonyl)-2,3-dihydro-1-benzofuran-7-yl]thieno[3,2-b]pyridin-2-yl}methyl)-1H-pyrrole-2,5-dione _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6VN2 _atom_sites.fract_transf_matrix[1][1] 0.014277 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000962 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015305 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01178 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 R44 A 1 601 1 R44 INX . D 3 ACT A 1 602 1 ACT ACT . E 2 R44 B 1 601 2 R44 INX . F 4 HOH A 1 701 9 HOH HOH . F 4 HOH A 2 702 5 HOH HOH . F 4 HOH A 3 703 4 HOH HOH . F 4 HOH A 4 704 10 HOH HOH . F 4 HOH A 5 705 14 HOH HOH . F 4 HOH A 6 706 12 HOH HOH . G 4 HOH B 1 701 1 HOH HOH . G 4 HOH B 2 702 3 HOH HOH . G 4 HOH B 3 703 6 HOH HOH . G 4 HOH B 4 704 15 HOH HOH . G 4 HOH B 5 705 7 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 R44 . . . C 2 26.658 -1.959 27.626 1 69.47 ? C2 R44 601 A 1 HETATM 2 C C3 R44 . . . C 2 26.545 -1.441 26.335 1 83.97 ? C3 R44 601 A 1 HETATM 3 C C4 R44 . . . C 2 26.23 -0.095 26.156 1 85.01 ? C4 R44 601 A 1 HETATM 4 C C5 R44 . . . C 2 26.026 0.743 27.259 1 88 ? C5 R44 601 A 1 HETATM 5 C C6 R44 . . . C 2 26.138 0.217 28.573 1 86.67 ? C6 R44 601 A 1 HETATM 6 C C7 R44 . . . C 2 26.45 -1.135 28.717 1 74.67 ? C7 R44 601 A 1 HETATM 7 C C8 R44 . . . C 2 25.929 1.067 29.782 1 96.35 ? C8 R44 601 A 1 HETATM 8 C C12 R44 . . . C 2 26.613 1.954 31.973 1 84.45 ? C12 R44 601 A 1 HETATM 9 C C16 R44 . . . C 2 26.869 1.114 30.866 1 87.79 ? C16 R44 601 A 1 HETATM 10 C C17 R44 . . . C 2 29.852 0.839 33.562 1 81.83 ? C17 R44 601 A 1 HETATM 11 C C19 R44 . . . C 2 31.263 2.891 33.564 1 85.92 ? C19 R44 601 A 1 HETATM 12 O O20 R44 . . . C 2 30.716 3.477 34.471 1 81.46 ? O20 R44 601 A 1 HETATM 13 C C21 R44 . . . C 2 32.449 3.455 32.823 1 96.24 ? C21 R44 601 A 1 HETATM 14 C C23 R44 . . . C 2 31.756 1.283 32.06 1 84.42 ? C23 R44 601 A 1 HETATM 15 O O25 R44 . . . C 2 25.724 1.995 26.855 1 85.22 ? O25 R44 601 A 1 HETATM 16 C C32 R44 . . . C 2 28.467 5.243 25.869 1 99.28 ? C32 R44 601 A 1 HETATM 17 C C33 R44 . . . C 2 28.995 5.466 27.305 1 100.61 ? C33 R44 601 A 1 HETATM 18 C C35 R44 . . . C 2 26.685 4.807 28.176 1 86.98 ? C35 R44 601 A 1 HETATM 19 C C36 R44 . . . C 2 26.183 4.919 26.729 1 82.76 ? C36 R44 601 A 1 HETATM 20 CL CL1 R44 . . . C 2 27.052 -3.618 27.925 1 80.7 ? CL1 R44 601 A 1 HETATM 21 C C9 R44 . . . C 2 24.782 1.878 29.882 1 106.42 ? C9 R44 601 A 1 HETATM 22 C C10 R44 . . . C 2 24.601 2.679 31.013 1 93.23 ? C10 R44 601 A 1 HETATM 23 N N11 R44 . . . C 2 25.483 2.706 32.001 1 78.71 ? N11 R44 601 A 1 HETATM 24 C C13 R44 . . . C 2 27.665 1.877 32.967 1 92.18 ? C13 R44 601 A 1 HETATM 25 C C14 R44 . . . C 2 28.655 1.062 32.678 1 88.78 ? C14 R44 601 A 1 HETATM 26 S S15 R44 . . . C 2 28.393 0.282 31.139 1 94.95 ? S15 R44 601 A 1 HETATM 27 N N18 R44 . . . C 2 30.957 1.674 33.068 1 76.88 ? N18 R44 601 A 1 HETATM 28 C C22 R44 . . . C 2 32.782 2.36 31.795 1 96.93 ? C22 R44 601 A 1 HETATM 29 O O24 R44 . . . C 2 31.699 0.237 31.448 1 85.41 ? O24 R44 601 A 1 HETATM 30 C C26 R44 . . . C 2 25.99 2.207 25.453 1 87.78 ? C26 R44 601 A 1 HETATM 31 C C28 R44 . . . C 2 26.047 0.749 24.907 1 84.66 ? C28 R44 601 A 1 HETATM 32 C C29 R44 . . . C 2 27.235 3.084 25.333 1 96.63 ? C29 R44 601 A 1 HETATM 33 O O30 R44 . . . C 2 28.196 2.679 24.699 1 97.18 ? O30 R44 601 A 1 HETATM 34 N N31 R44 . . . C 2 27.282 4.332 25.921 1 96.64 ? N31 R44 601 A 1 HETATM 35 N N34 R44 . . . C 2 27.889 5.651 28.274 1 93.82 ? N34 R44 601 A 1 # _model_server_stats.io_time_ms 19 _model_server_stats.parse_time_ms 18 _model_server_stats.create_model_time_ms 7 _model_server_stats.query_time_ms 311 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 35 #