data_6VN2 # _model_server_result.job_id AJ_4ZGETyXwp06NxQziuwA _model_server_result.datetime_utc '2024-10-18 04:19:39' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6vn2 # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"E","auth_seq_id":601}' # _entry.id 6VN2 # _exptl.entry_id 6VN2 _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 510.993 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 1-({7-[(2R)-5-chloro-2-(piperazine-1-carbonyl)-2,3-dihydro-1-benzofuran-7-yl]thieno[3,2-b]pyridin-2-yl}methyl)-1H-pyrrole-2,5-dione _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 93.86 _cell.angle_gamma 90 _cell.entry_id 6VN2 _cell.length_a 70.044 _cell.length_b 65.339 _cell.length_c 85.081 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6VN2 _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id PISA monomeric 1 author_and_software_defined_assembly 1 PISA monomeric 1 author_and_software_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,F 1 1 B,E,G 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 E N N # _struct_conn.conn_type_id disulf _struct_conn.details ? _struct_conn.id disulf1 _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_atom_id SG _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 110 _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 315 _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id B _struct_conn.ptnr2_label_atom_id SG _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 110 _struct_conn.ptnr2_auth_asym_id B _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 315 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_PDB_id ? _struct_conn.pdbx_dist_value 2.058 _struct_conn.pdbx_value_order ? # _chem_comp.formula 'C25 H23 Cl N4 O4 S' _chem_comp.formula_weight 510.993 _chem_comp.id R44 _chem_comp.mon_nstd_flag . _chem_comp.name 1-({7-[(2R)-5-chloro-2-(piperazine-1-carbonyl)-2,3-dihydro-1-benzofuran-7-yl]thieno[3,2-b]pyridin-2-yl}methyl)-1H-pyrrole-2,5-dione _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # _atom_sites.entry_id 6VN2 _atom_sites.fract_transf_matrix[1][1] 0.014277 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0.000962 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.015305 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.01178 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 R44 A 1 601 1 R44 INX . D 3 ACT A 1 602 1 ACT ACT . E 2 R44 B 1 601 2 R44 INX . F 4 HOH A 1 701 9 HOH HOH . F 4 HOH A 2 702 5 HOH HOH . F 4 HOH A 3 703 4 HOH HOH . F 4 HOH A 4 704 10 HOH HOH . F 4 HOH A 5 705 14 HOH HOH . F 4 HOH A 6 706 12 HOH HOH . G 4 HOH B 1 701 1 HOH HOH . G 4 HOH B 2 702 3 HOH HOH . G 4 HOH B 3 703 6 HOH HOH . G 4 HOH B 4 704 15 HOH HOH . G 4 HOH B 5 705 7 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C2 R44 . . . E 2 6.314 1.006 93.809 1 62.94 ? C2 R44 601 B 1 HETATM 2 C C3 R44 . . . E 2 7.153 1.5 94.797 1 74.87 ? C3 R44 601 B 1 HETATM 3 C C4 R44 . . . E 2 7.565 2.822 94.767 1 73.83 ? C4 R44 601 B 1 HETATM 4 C C5 R44 . . . E 2 7.132 3.684 93.761 1 63.91 ? C5 R44 601 B 1 HETATM 5 C C6 R44 . . . E 2 6.277 3.194 92.736 1 68.56 ? C6 R44 601 B 1 HETATM 6 C C7 R44 . . . E 2 5.886 1.852 92.797 1 68.1 ? C7 R44 601 B 1 HETATM 7 C C8 R44 . . . E 2 5.794 4.101 91.647 1 76.59 ? C8 R44 601 B 1 HETATM 8 C C12 R44 . . . E 2 4.026 5.074 90.241 1 68 ? C12 R44 601 B 1 HETATM 9 C C16 R44 . . . E 2 4.415 4.166 91.248 1 62.19 ? C16 R44 601 B 1 HETATM 10 C C17 R44 . . . E 2 0.443 3.952 90.545 1 77.17 ? C17 R44 601 B 1 HETATM 11 C C19 R44 . . . E 2 -0.759 5.975 91.363 1 87.12 ? C19 R44 601 B 1 HETATM 12 O O20 R44 . . . E 2 -0.785 6.588 90.319 1 86.67 ? O20 R44 601 B 1 HETATM 13 C C21 R44 . . . E 2 -1.357 6.508 92.642 1 87.31 ? C21 R44 601 B 1 HETATM 14 C C23 R44 . . . E 2 -0.35 4.336 92.859 1 80.3 ? C23 R44 601 B 1 HETATM 15 O O25 R44 . . . E 2 7.659 4.917 93.951 1 91 ? O25 R44 601 B 1 HETATM 16 C C32 R44 . . . E 2 5.809 8.004 96.496 1 120.81 ? C32 R44 601 B 1 HETATM 17 C C33 R44 . . . E 2 4.622 8.329 95.562 1 125.95 ? C33 R44 601 B 1 HETATM 18 C C35 R44 . . . E 2 6.152 7.902 93.577 1 99.65 ? C35 R44 601 B 1 HETATM 19 C C36 R44 . . . E 2 7.323 7.872 94.563 1 93.52 ? C36 R44 601 B 1 HETATM 20 CL CL1 R44 . . . E 2 5.813 -0.653 93.842 1 89.24 ? CL1 R44 601 B 1 HETATM 21 C C9 R44 . . . E 2 6.696 4.977 90.995 1 81.57 ? C9 R44 601 B 1 HETATM 22 C C10 R44 . . . E 2 6.228 5.842 90.008 1 76.07 ? C10 R44 601 B 1 HETATM 23 N N11 R44 . . . E 2 4.955 5.871 89.661 1 85.39 ? N11 R44 601 B 1 HETATM 24 C C13 R44 . . . E 2 2.609 5.022 89.95 1 66.6 ? C13 R44 601 B 1 HETATM 25 C C14 R44 . . . E 2 1.927 4.16 90.664 1 68.31 ? C14 R44 601 B 1 HETATM 26 S S15 R44 . . . E 2 2.974 3.304 91.764 1 86.74 ? S15 R44 601 B 1 HETATM 27 N N18 R44 . . . E 2 -0.223 4.756 91.586 1 85.08 ? N18 R44 601 B 1 HETATM 28 C C22 R44 . . . E 2 -1.073 5.392 93.661 1 82.63 ? C22 R44 601 B 1 HETATM 29 O O24 R44 . . . E 2 0.041 3.283 93.321 1 68.58 ? O24 R44 601 B 1 HETATM 30 C C26 R44 . . . E 2 8.153 5.091 95.298 1 102.24 ? C26 R44 601 B 1 HETATM 31 C C28 R44 . . . E 2 8.445 3.622 95.701 1 87.94 ? C28 R44 601 B 1 HETATM 32 C C29 R44 . . . E 2 7.147 5.894 96.111 1 89.62 ? C29 R44 601 B 1 HETATM 33 O O30 R44 . . . E 2 6.666 5.394 97.104 1 114.22 ? O30 R44 601 B 1 HETATM 34 N N31 R44 . . . E 2 6.797 7.167 95.753 1 89.1 ? N31 R44 601 B 1 HETATM 35 N N34 R44 . . . E 2 5.071 8.692 94.197 1 114.65 ? N34 R44 601 B 1 # _model_server_stats.io_time_ms 67 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 6 _model_server_stats.query_time_ms 301 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 35 #