data_6VNE
#
_model_server_result.job_id            vFkxLLYFNas9sJaujz6iGQ 
_model_server_result.datetime_utc      '2024-11-26 13:09:11' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6vne 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1201}' 
#
_entry.id    6VNE 
#
_exptl.entry_id    6VNE 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              524.678 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N-tert-butyl-3-{[5-methyl-2-({4-[2-(pyrrolidin-1-yl)ethoxy]phenyl}amino)pyrimidin-4-yl]amino}benzenesulfonamide 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6VNE 
_cell.length_a            114.24 
_cell.length_b            114.24 
_cell.length_c            70.891 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6VNE 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        76 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
PISA monomeric 1 author_and_software_defined_assembly 1 
PISA monomeric 1 author_and_software_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C GLU 182 B GLU 1006 1_555 A N PTR 183 B PTR 1007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale2 A C PTR 183 B PTR 1007 1_555 A N TYR 184 B TYR 1008 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.326 ? 
covale ? covale3 B C GLU 182 A GLU 1006 1_555 B N PTR 183 A PTR 1007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.331 ? 
covale ? covale4 B C PTR 183 A PTR 1007 1_555 B N TYR 184 A TYR 1008 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.325 ? 
#
_chem_comp.formula           'C27 H36 N6 O3 S' 
_chem_comp.formula_weight    524.678 
_chem_comp.id                2TA 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N-tert-butyl-3-{[5-methyl-2-({4-[2-(pyrrolidin-1-yl)ethoxy]phenyl}amino)pyrimidin-4-yl]amino}benzenesulfonamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     Fedratinib 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
CAA C5 2TA sing 1 n n 
C6 C5 2TA doub 2 n y 
C6 N1 2TA sing 3 n y 
C5 C4 2TA sing 4 n y 
N1 C2 2TA doub 5 n y 
C2 N3 2TA sing 6 n y 
C2 NAF 2TA sing 7 n n 
C4 NAW 2TA sing 8 n n 
C4 N3 2TA doub 9 n y 
NAW CAX 2TA sing 10 n n 
NAF CAG 2TA sing 11 n n 
CAG CAH 2TA doub 12 n y 
CAG CAL 2TA sing 13 n y 
CAH CAI 2TA sing 14 n y 
CAX CAY 2TA doub 15 n y 
CAX CBC 2TA sing 16 n y 
CAY CAZ 2TA sing 17 n y 
CAL CAK 2TA doub 18 n y 
CAI CAJ 2TA doub 19 n y 
CBC CBB 2TA doub 20 n y 
CAZ CBA 2TA doub 21 n y 
CAK CAJ 2TA sing 22 n y 
CAJ OAM 2TA sing 23 n n 
CBB CBA 2TA sing 24 n y 
CBB SBD 2TA sing 25 n n 
OAM CAN 2TA sing 26 n n 
OBK SBD 2TA doub 27 n n 
NBE SBD 2TA sing 28 n n 
NBE CBF 2TA sing 29 n n 
CAN CAO 2TA sing 30 n n 
SBD OBJ 2TA doub 31 n n 
CBG CBF 2TA sing 32 n n 
CBH CBF 2TA sing 33 n n 
CBF CBI 2TA sing 34 n n 
CAO NAP 2TA sing 35 n n 
NAP CAQ 2TA sing 36 n n 
NAP CAT 2TA sing 37 n n 
CAQ CAR 2TA sing 38 n n 
CAT CAS 2TA sing 39 n n 
CAR CAS 2TA sing 40 n n 
CAQ H1 2TA sing 41 n n 
CAQ H2 2TA sing 42 n n 
CAR H3 2TA sing 43 n n 
CAR H4 2TA sing 44 n n 
CAS H5 2TA sing 45 n n 
CAS H6 2TA sing 46 n n 
CAT H7 2TA sing 47 n n 
CAT H8 2TA sing 48 n n 
CAO H10 2TA sing 49 n n 
CAO H11 2TA sing 50 n n 
CAN H12 2TA sing 51 n n 
CAN H13 2TA sing 52 n n 
CAK H14 2TA sing 53 n n 
CAL H15 2TA sing 54 n n 
CAI H16 2TA sing 55 n n 
CAH H17 2TA sing 56 n n 
NAF H18 2TA sing 57 n n 
C6 H19 2TA sing 58 n n 
CAA H20 2TA sing 59 n n 
CAA H21 2TA sing 60 n n 
CAA H22 2TA sing 61 n n 
NAW H23 2TA sing 62 n n 
CBC H24 2TA sing 63 n n 
CAY H25 2TA sing 64 n n 
CAZ H26 2TA sing 65 n n 
CBA H27 2TA sing 66 n n 
NBE H28 2TA sing 67 n n 
CBH H29 2TA sing 68 n n 
CBH H30 2TA sing 69 n n 
CBH H31 2TA sing 70 n n 
CBI H32 2TA sing 71 n n 
CBI H33 2TA sing 72 n n 
CBI H34 2TA sing 73 n n 
CBG H35 2TA sing 74 n n 
CBG H36 2TA sing 75 n n 
CBG H37 2TA sing 76 n n 
#
_atom_sites.entry_id                     6VNE 
_atom_sites.fract_transf_matrix[1][1]    0.008754 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008754 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014106 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 2TA B 1 1201 2 2TA LIG . 
D 2 2TA A 1 1201 3 2TA LIG . 
E 3 HOH B 1 1301 17 HOH HOH . 
E 3 HOH B 2 1302 31 HOH HOH . 
E 3 HOH B 3 1303 10 HOH HOH . 
E 3 HOH B 4 1304 23 HOH HOH . 
E 3 HOH B 5 1305 19 HOH HOH . 
E 3 HOH B 6 1306 22 HOH HOH . 
E 3 HOH B 7 1307 4 HOH HOH . 
E 3 HOH B 8 1308 1 HOH HOH . 
E 3 HOH B 9 1309 2 HOH HOH . 
E 3 HOH B 10 1310 14 HOH HOH . 
E 3 HOH B 11 1311 12 HOH HOH . 
E 3 HOH B 12 1312 25 HOH HOH . 
E 3 HOH B 13 1313 16 HOH HOH . 
E 3 HOH B 14 1314 18 HOH HOH . 
E 3 HOH B 15 1315 32 HOH HOH . 
E 3 HOH B 16 1316 33 HOH HOH . 
E 3 HOH B 17 1317 29 HOH HOH . 
E 3 HOH B 18 1318 24 HOH HOH . 
E 3 HOH B 19 1319 30 HOH HOH . 
E 3 HOH B 20 1320 21 HOH HOH . 
F 3 HOH A 1 1301 3 HOH HOH . 
F 3 HOH A 2 1302 7 HOH HOH . 
F 3 HOH A 3 1303 26 HOH HOH . 
F 3 HOH A 4 1304 8 HOH HOH . 
F 3 HOH A 5 1305 9 HOH HOH . 
F 3 HOH A 6 1306 5 HOH HOH . 
F 3 HOH A 7 1307 34 HOH HOH . 
F 3 HOH A 8 1308 15 HOH HOH . 
F 3 HOH A 9 1309 13 HOH HOH . 
F 3 HOH A 10 1310 11 HOH HOH . 
F 3 HOH A 11 1311 20 HOH HOH . 
F 3 HOH A 12 1312 27 HOH HOH . 
F 3 HOH A 13 1313 28 HOH HOH . 
F 3 HOH A 14 1314 6 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C CAQ 2TA . . . D 2 42.507 -2.239 8.68 1 96.89 ? CAQ 2TA 1201 A 1 
HETATM 2 C CAR 2TA . . . D 2 42.939 -1.017 7.711 1 91.95 ? CAR 2TA 1201 A 1 
HETATM 3 C CAS 2TA . . . D 2 42.826 0.032 8.406 1 99.1 ? CAS 2TA 1201 A 1 
HETATM 4 C CAT 2TA . . . D 2 42.962 -0.389 9.887 1 98.4 ? CAT 2TA 1201 A 1 
HETATM 5 N NAP 2TA . . . D 2 42.9 -1.904 9.848 1 98.57 ? NAP 2TA 1201 A 1 
HETATM 6 C CAO 2TA . . . D 2 42.215 -2.41 10.705 1 96.4 ? CAO 2TA 1201 A 1 
HETATM 7 C CAN 2TA . . . D 2 40.94 -1.634 11.078 1 90.12 ? CAN 2TA 1201 A 1 
HETATM 8 O OAM 2TA . . . D 2 40.883 -1.57 12.479 1 60.42 ? OAM 2TA 1201 A 1 
HETATM 9 C CAJ 2TA . . . D 2 39.735 -0.986 13.023 1 62.98 ? CAJ 2TA 1201 A 1 
HETATM 10 C CAK 2TA . . . D 2 39.911 -0.038 14.015 1 75.71 ? CAK 2TA 1201 A 1 
HETATM 11 C CAL 2TA . . . D 2 38.811 0.566 14.604 1 60.66 ? CAL 2TA 1201 A 1 
HETATM 12 C CAI 2TA . . . D 2 38.444 -1.334 12.621 1 62.12 ? CAI 2TA 1201 A 1 
HETATM 13 C CAH 2TA . . . D 2 37.34 -0.728 13.215 1 51.41 ? CAH 2TA 1201 A 1 
HETATM 14 C CAG 2TA . . . D 2 37.533 0.231 14.211 1 53.07 ? CAG 2TA 1201 A 1 
HETATM 15 N NAF 2TA . . . D 2 36.475 0.953 14.912 1 62.85 ? NAF 2TA 1201 A 1 
HETATM 16 C C2 2TA . . . D 2 35.068 1.021 14.577 1 59.36 ? C2 2TA 1201 A 1 
HETATM 17 N N3 2TA . . . D 2 34.564 0.245 13.63 1 55.19 ? N3 2TA 1201 A 1 
HETATM 18 N N1 2TA . . . D 2 34.323 1.88 15.264 1 67.11 ? N1 2TA 1201 A 1 
HETATM 19 C C6 2TA . . . D 2 33.024 1.987 15.025 1 64.11 ? C6 2TA 1201 A 1 
HETATM 20 C C5 2TA . . . D 2 32.448 1.192 14.04 1 65.49 ? C5 2TA 1201 A 1 
HETATM 21 C CAA 2TA . . . D 2 30.959 1.269 13.708 1 49.68 ? CAA 2TA 1201 A 1 
HETATM 22 C C4 2TA . . . D 2 33.278 0.313 13.34 1 58.4 ? C4 2TA 1201 A 1 
HETATM 23 N NAW 2TA . . . D 2 32.679 -0.513 12.309 1 64.56 ? NAW 2TA 1201 A 1 
HETATM 24 C CAX 2TA . . . D 2 33.418 -1.392 11.437 1 60 ? CAX 2TA 1201 A 1 
HETATM 25 C CBC 2TA . . . D 2 32.775 -2.53 10.991 1 61.36 ? CBC 2TA 1201 A 1 
HETATM 26 C CAY 2TA . . . D 2 34.724 -1.117 11.057 1 59.73 ? CAY 2TA 1201 A 1 
HETATM 27 C CAZ 2TA . . . D 2 35.384 -2.005 10.218 1 65.17 ? CAZ 2TA 1201 A 1 
HETATM 28 C CBA 2TA . . . D 2 34.732 -3.15 9.774 1 52.93 ? CBA 2TA 1201 A 1 
HETATM 29 C CBB 2TA . . . D 2 33.434 -3.406 10.153 1 64.43 ? CBB 2TA 1201 A 1 
HETATM 30 S SBD 2TA . . . D 2 32.578 -4.901 9.549 1 107.25 ? SBD 2TA 1201 A 1 
HETATM 31 O OBJ 2TA . . . D 2 33.433 -6.045 9.866 1 84.83 ? OBJ 2TA 1201 A 1 
HETATM 32 O OBK 2TA . . . D 2 31.425 -5.233 10.388 1 96.98 ? OBK 2TA 1201 A 1 
HETATM 33 N NBE 2TA . . . D 2 32.192 -4.842 7.847 1 87.06 ? NBE 2TA 1201 A 1 
HETATM 34 C CBF 2TA . . . D 2 31.483 -3.776 7.109 1 65.85 ? CBF 2TA 1201 A 1 
HETATM 35 C CBH 2TA . . . D 2 30.099 -3.481 7.657 1 75.28 ? CBH 2TA 1201 A 1 
HETATM 36 C CBI 2TA . . . D 2 31.243 -4.203 5.673 1 63.96 ? CBI 2TA 1201 A 1 
HETATM 37 C CBG 2TA . . . D 2 32.29 -2.481 7.075 1 65.02 ? CBG 2TA 1201 A 1 
#
_model_server_stats.io_time_ms              45 
_model_server_stats.parse_time_ms           9 
_model_server_stats.create_model_time_ms    6 
_model_server_stats.query_time_ms           243 
_model_server_stats.encode_time_ms          4 
_model_server_stats.element_count           37 
#