data_6VNH
#
_model_server_result.job_id            6W4mCZwQvanoo2XAQsJOXg 
_model_server_result.datetime_utc      '2024-11-24 23:27:30' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6vnh 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"D","auth_seq_id":1201}' 
#
_entry.id    6VNH 
#
_exptl.entry_id    6VNH 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              562.65 
_entity.id                          2 
_entity.src_method                  syn 
_entity.type                        non-polymer 
_entity.pdbx_description            N-{5-[(2-{[3,5-difluoro-4-(1-methylpiperidin-4-yl)phenyl]amino}-5-methylpyrimidin-4-yl)amino]-2-fluorophenyl}-2-methylpropane-2-sulfonamide 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         90 
_cell.angle_beta          90 
_cell.angle_gamma         90 
_cell.entry_id            6VNH 
_cell.length_a            111.651 
_cell.length_b            111.651 
_cell.length_c            70.565 
_cell.Z_PDB               8 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6VNH 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        76 
_symmetry.space_group_name_Hall    ? 
_symmetry.space_group_name_H-M     'P 41' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
loop_
_struct_conn.conn_type_id
_struct_conn.details
_struct_conn.id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_PDB_id
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
covale ? covale1 A C GLU 182 B GLU 1006 1_555 A N PTR 183 B PTR 1007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale2 A C PTR 183 B PTR 1007 1_555 A N TYR 184 B TYR 1008 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.327 ? 
covale ? covale3 B C GLU 182 A GLU 1006 1_555 B N PTR 183 A PTR 1007 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.328 ? 
covale ? covale4 B C PTR 183 A PTR 1007 1_555 B N TYR 184 A TYR 1008 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.33 ? 
#
_chem_comp.formula           'C27 H33 F3 N6 O2 S' 
_chem_comp.formula_weight    562.65 
_chem_comp.id                XZS 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              N-{5-[(2-{[3,5-difluoro-4-(1-methylpiperidin-4-yl)phenyl]amino}-5-methylpyrimidin-4-yl)amino]-2-fluorophenyl}-2-methylpropane-2-sulfonamide 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     ? 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N06 C07 XZS doub 405 n y 
N06 C05 XZS sing 406 n y 
C07 C02 XZS sing 407 n y 
N08 C05 XZS sing 408 n n 
N08 C09 XZS sing 409 n n 
C05 N04 XZS doub 410 n y 
C10 C09 XZS doub 411 n y 
C10 C11 XZS sing 412 n y 
C09 C16 XZS sing 413 n y 
F12 C11 XZS sing 414 n n 
C02 C01 XZS sing 415 n n 
C02 C03 XZS doub 416 n y 
C11 C13 XZS doub 417 n y 
N04 C03 XZS sing 418 n y 
C16 C14 XZS doub 419 n y 
C03 N24 XZS sing 420 n n 
C22 C21 XZS sing 421 n n 
C22 C17 XZS sing 422 n n 
C13 C14 XZS sing 423 n y 
C13 C17 XZS sing 424 n n 
C14 F15 XZS sing 425 n n 
C21 N20 XZS sing 426 n n 
C17 C18 XZS sing 427 n n 
N24 C25 XZS sing 428 n n 
C25 C38 XZS doub 429 n y 
C25 C26 XZS sing 430 n y 
C18 C19 XZS sing 431 n n 
C38 C29 XZS sing 432 n y 
N20 C23 XZS sing 433 n n 
N20 C19 XZS sing 434 n n 
C26 C27 XZS doub 435 n y 
C29 N30 XZS sing 436 n n 
C29 C28 XZS doub 437 n y 
N30 S31 XZS sing 438 n n 
C27 C28 XZS sing 439 n y 
C28 F39 XZS sing 440 n n 
O37 S31 XZS doub 441 n n 
S31 O36 XZS doub 442 n n 
S31 C32 XZS sing 443 n n 
C34 C32 XZS sing 444 n n 
C32 C35 XZS sing 445 n n 
C32 C33 XZS sing 446 n n 
C10 H1 XZS sing 447 n n 
C17 H2 XZS sing 448 n n 
C21 H3 XZS sing 449 n n 
C21 H4 XZS sing 450 n n 
C22 H5 XZS sing 451 n n 
C22 H6 XZS sing 452 n n 
C26 H7 XZS sing 453 n n 
C01 H8 XZS sing 454 n n 
C01 H9 XZS sing 455 n n 
C01 H10 XZS sing 456 n n 
C07 H11 XZS sing 457 n n 
C16 H12 XZS sing 458 n n 
C18 H13 XZS sing 459 n n 
C18 H14 XZS sing 460 n n 
C19 H15 XZS sing 461 n n 
C19 H16 XZS sing 462 n n 
C23 H17 XZS sing 463 n n 
C23 H18 XZS sing 464 n n 
C23 H19 XZS sing 465 n n 
C27 H20 XZS sing 466 n n 
C33 H21 XZS sing 467 n n 
C33 H22 XZS sing 468 n n 
C33 H23 XZS sing 469 n n 
C34 H24 XZS sing 470 n n 
C34 H25 XZS sing 471 n n 
C34 H26 XZS sing 472 n n 
C35 H27 XZS sing 473 n n 
C35 H28 XZS sing 474 n n 
C35 H29 XZS sing 475 n n 
C38 H30 XZS sing 476 n n 
N08 H31 XZS sing 477 n n 
N24 H33 XZS sing 478 n n 
N30 H34 XZS sing 479 n n 
#
_atom_sites.entry_id                     6VNH 
_atom_sites.fract_transf_matrix[1][1]    0.008956 
_atom_sites.fract_transf_matrix[1][2]    0 
_atom_sites.fract_transf_matrix[1][3]    0 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.008956 
_atom_sites.fract_transf_matrix[2][3]    0 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.014171 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 XZS B 1 1201 2 XZS LIG . 
D 2 XZS A 1 1201 1 XZS LIG . 
E 3 HOH B 1 1301 11 HOH HOH . 
E 3 HOH B 2 1302 5 HOH HOH . 
E 3 HOH B 3 1303 15 HOH HOH . 
E 3 HOH B 4 1304 3 HOH HOH . 
E 3 HOH B 5 1305 42 HOH HOH . 
E 3 HOH B 6 1306 12 HOH HOH . 
E 3 HOH B 7 1307 9 HOH HOH . 
E 3 HOH B 8 1308 24 HOH HOH . 
E 3 HOH B 9 1309 18 HOH HOH . 
E 3 HOH B 10 1310 30 HOH HOH . 
E 3 HOH B 11 1311 28 HOH HOH . 
E 3 HOH B 12 1312 10 HOH HOH . 
E 3 HOH B 13 1313 35 HOH HOH . 
E 3 HOH B 14 1314 7 HOH HOH . 
E 3 HOH B 15 1315 29 HOH HOH . 
E 3 HOH B 16 1316 13 HOH HOH . 
E 3 HOH B 17 1317 34 HOH HOH . 
E 3 HOH B 18 1318 2 HOH HOH . 
E 3 HOH B 19 1319 23 HOH HOH . 
E 3 HOH B 20 1320 26 HOH HOH . 
E 3 HOH B 21 1321 22 HOH HOH . 
E 3 HOH B 22 1322 40 HOH HOH . 
E 3 HOH B 23 1323 36 HOH HOH . 
F 3 HOH A 1 1301 1 HOH HOH . 
F 3 HOH A 2 1302 16 HOH HOH . 
F 3 HOH A 3 1303 8 HOH HOH . 
F 3 HOH A 4 1304 20 HOH HOH . 
F 3 HOH A 5 1305 19 HOH HOH . 
F 3 HOH A 6 1306 31 HOH HOH . 
F 3 HOH A 7 1307 39 HOH HOH . 
F 3 HOH A 8 1308 32 HOH HOH . 
F 3 HOH A 9 1309 6 HOH HOH . 
F 3 HOH A 10 1310 4 HOH HOH . 
F 3 HOH A 11 1311 25 HOH HOH . 
F 3 HOH A 12 1312 14 HOH HOH . 
F 3 HOH A 13 1313 27 HOH HOH . 
F 3 HOH A 14 1314 17 HOH HOH . 
F 3 HOH A 15 1315 41 HOH HOH . 
F 3 HOH A 16 1316 38 HOH HOH . 
F 3 HOH A 17 1317 21 HOH HOH . 
F 3 HOH A 18 1318 33 HOH HOH . 
F 3 HOH A 19 1319 37 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C10 XZS . . . D 2 56.902 -17.765 -15.004 1 72.45 ? C10 XZS 1201 A 1 
HETATM 2 C C13 XZS . . . D 2 55.262 -16.895 -13.472 1 82.25 ? C13 XZS 1201 A 1 
HETATM 3 C C17 XZS . . . D 2 54.584 -15.729 -12.716 1 90.92 ? C17 XZS 1201 A 1 
HETATM 4 C C21 XZS . . . D 2 53.206 -13.718 -12.816 1 100.28 ? C21 XZS 1201 A 1 
HETATM 5 C C22 XZS . . . D 2 54.021 -14.757 -13.561 1 91.51 ? C22 XZS 1201 A 1 
HETATM 6 C C26 XZS . . . D 2 54.899 -21.947 -11.428 1 65.57 ? C26 XZS 1201 A 1 
HETATM 7 C C28 XZS . . . D 2 52.653 -22.185 -10.618 1 79.02 ? C28 XZS 1201 A 1 
HETATM 8 C C01 XZS . . . D 2 57.505 -25.631 -14.261 1 57.62 ? C01 XZS 1201 A 1 
HETATM 9 C C02 XZS . . . D 2 57.377 -24.143 -14.57 1 56.95 ? C02 XZS 1201 A 1 
HETATM 10 C C03 XZS . . . D 2 56.657 -23.301 -13.733 1 69.86 ? C03 XZS 1201 A 1 
HETATM 11 C C05 XZS . . . D 2 57.163 -21.54 -15.133 1 52.47 ? C05 XZS 1201 A 1 
HETATM 12 C C07 XZS . . . D 2 57.98 -23.621 -15.7 1 59.69 ? C07 XZS 1201 A 1 
HETATM 13 C C09 XZS . . . D 2 56.441 -19.054 -14.791 1 68.98 ? C09 XZS 1201 A 1 
HETATM 14 C C11 XZS . . . D 2 56.327 -16.686 -14.353 1 79.41 ? C11 XZS 1201 A 1 
HETATM 15 C C14 XZS . . . D 2 54.799 -18.188 -13.26 1 75.87 ? C14 XZS 1201 A 1 
HETATM 16 C C16 XZS . . . D 2 55.381 -19.264 -13.918 1 67.99 ? C16 XZS 1201 A 1 
HETATM 17 C C18 XZS . . . D 2 55.522 -15.092 -11.884 1 87.54 ? C18 XZS 1201 A 1 
HETATM 18 C C19 XZS . . . D 2 54.896 -14.089 -10.934 1 86.46 ? C19 XZS 1201 A 1 
HETATM 19 C C23 XZS . . . D 2 53.792 -12.23 -11.313 1 94.33 ? C23 XZS 1201 A 1 
HETATM 20 C C25 XZS . . . D 2 54.873 -23.256 -11.884 1 68.38 ? C25 XZS 1201 A 1 
HETATM 21 C C27 XZS . . . D 2 53.787 -21.409 -10.8 1 67.48 ? C27 XZS 1201 A 1 
HETATM 22 C C29 XZS . . . D 2 52.632 -23.497 -11.065 1 76.77 ? C29 XZS 1201 A 1 
HETATM 23 C C32 XZS . . . D 2 52.255 -25.257 -8.196 1 62.86 ? C32 XZS 1201 A 1 
HETATM 24 C C33 XZS . . . D 2 51.659 -26.065 -7.05 1 74.61 ? C33 XZS 1201 A 1 
HETATM 25 C C34 XZS . . . D 2 53.259 -26.136 -8.936 1 76.29 ? C34 XZS 1201 A 1 
HETATM 26 C C35 XZS . . . D 2 52.964 -24.025 -7.638 1 67.65 ? C35 XZS 1201 A 1 
HETATM 27 C C38 XZS . . . D 2 53.743 -24.031 -11.694 1 72.88 ? C38 XZS 1201 A 1 
HETATM 28 F F12 XZS . . . D 2 56.828 -15.439 -14.604 1 80.89 ? F12 XZS 1201 A 1 
HETATM 29 F F15 XZS . . . D 2 53.761 -18.403 -12.401 1 75.32 ? F15 XZS 1201 A 1 
HETATM 30 F F39 XZS . . . D 2 51.557 -21.656 -10 1 81.77 ? F39 XZS 1201 A 1 
HETATM 31 N N04 XZS . . . D 2 56.579 -22.016 -14.047 1 66.59 ? N04 XZS 1201 A 1 
HETATM 32 N N06 XZS . . . D 2 57.845 -22.331 -15.933 1 60.97 ? N06 XZS 1201 A 1 
HETATM 33 N N08 XZS . . . D 2 57.094 -20.137 -15.516 1 59.16 ? N08 XZS 1201 A 1 
HETATM 34 N N20 XZS . . . D 2 53.672 -13.425 -11.439 1 97.11 ? N20 XZS 1201 A 1 
HETATM 35 N N24 XZS . . . D 2 56.031 -23.846 -12.536 1 69.92 ? N24 XZS 1201 A 1 
HETATM 36 N N30 XZS . . . D 2 51.448 -24.321 -10.877 1 81.92 ? N30 XZS 1201 A 1 
HETATM 37 O O36 XZS . . . D 2 50.148 -23.637 -8.709 1 104.15 ? O36 XZS 1201 A 1 
HETATM 38 O O37 XZS . . . D 2 49.873 -25.779 -9.37 1 101.47 ? O37 XZS 1201 A 1 
HETATM 39 S S31 XZS . . . D 2 50.904 -24.739 -9.306 1 111.8 ? S31 XZS 1201 A 1 
#
_model_server_stats.io_time_ms              67 
_model_server_stats.parse_time_ms           29 
_model_server_stats.create_model_time_ms    5 
_model_server_stats.query_time_ms           347 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           39 
#