data_6VOB # _model_server_result.job_id xq7ndKBtLl422DGdgF_DPA _model_server_result.datetime_utc '2024-11-17 14:46:35' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6vob # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"C","auth_seq_id":202}' # _entry.id 6VOB # _exptl.entry_id 6VOB _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 42.02 _entity.id 3 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'AZIDE ION' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6VOB _cell.length_a 57.66 _cell.length_b 57.66 _cell.length_c 183.78 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6VOB _symmetry.cell_setting ? _symmetry.Int_Tables_number 98 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'I 41 2 2' # _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1 0 0 0 1 0 0 0 1 0 0 0 2 'crystal symmetry operation' 8_665 -y+1,-x+1,-z 0 -1 0 -1 0 0 0 0 -1 57.66 57.66 0 3 'crystal symmetry operation' 10_665 -x+1,-y+1,z -1 0 0 0 -1 0 0 0 1 57.66 57.66 0 4 'crystal symmetry operation' 15_555 y,x,-z 0 1 0 1 0 0 0 0 -1 0 0 0 # _struct_asym.details ? _struct_asym.entity_id 3 _struct_asym.id C _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A OH TYR 124 A TYR 124 1_555 B FE1 KM3 . A KM3 201 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 1.807 ? metalc ? metalc2 B FE1 KM3 . A KM3 201 1_555 C N1 AZI . A AZI 202 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.45 ? metalc ? metalc3 B FE1 KM3 . A KM3 201 1_555 C N3 AZI . A AZI 202 10_665 ? ? ? ? ? ? ? ? ? ? ? ? 2.449 ? metalc ? metalc4 B FE1 KM3 . A KM3 201 1_555 E O HOH . A HOH 302 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.139 ? metalc ? metalc5 B FE1 KM3 . A KM3 201 1_555 E O HOH . A HOH 302 10_665 ? ? ? ? ? ? ? ? ? ? ? ? 2.139 ? # _chem_comp.formula 'N3 -1' _chem_comp.formula_weight 42.02 _chem_comp.id AZI _chem_comp.mon_nstd_flag . _chem_comp.name 'AZIDE ION' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N1 N2 AZI doub 76 n n N2 N3 AZI doub 77 n n # _atom_sites.entry_id 6VOB _atom_sites.fract_transf_matrix[1][1] 0.017343 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.017343 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.005441 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 KM3 A 1 201 1 KM3 KM3 . C 3 AZI A 1 202 1 AZI AZI . D 4 ACT A 1 203 1 ACT ACT . E 5 HOH A 1 301 34 HOH HOH . E 5 HOH A 2 302 1 HOH HOH . E 5 HOH A 3 303 94 HOH HOH . E 5 HOH A 4 304 157 HOH HOH . E 5 HOH A 5 305 40 HOH HOH . E 5 HOH A 6 306 68 HOH HOH . E 5 HOH A 7 307 17 HOH HOH . E 5 HOH A 8 308 55 HOH HOH . E 5 HOH A 9 309 43 HOH HOH . E 5 HOH A 10 310 29 HOH HOH . E 5 HOH A 11 311 5 HOH HOH . E 5 HOH A 12 312 85 HOH HOH . E 5 HOH A 13 313 10 HOH HOH . E 5 HOH A 14 314 31 HOH HOH . E 5 HOH A 15 315 37 HOH HOH . E 5 HOH A 16 316 98 HOH HOH . E 5 HOH A 17 317 22 HOH HOH . E 5 HOH A 18 318 3 HOH HOH . E 5 HOH A 19 319 25 HOH HOH . E 5 HOH A 20 320 9 HOH HOH . E 5 HOH A 21 321 7 HOH HOH . E 5 HOH A 22 322 27 HOH HOH . E 5 HOH A 23 323 45 HOH HOH . E 5 HOH A 24 324 155 HOH HOH . E 5 HOH A 25 325 93 HOH HOH . E 5 HOH A 26 326 38 HOH HOH . E 5 HOH A 27 327 60 HOH HOH . E 5 HOH A 28 328 57 HOH HOH . E 5 HOH A 29 329 51 HOH HOH . E 5 HOH A 30 330 16 HOH HOH . E 5 HOH A 31 331 39 HOH HOH . E 5 HOH A 32 332 92 HOH HOH . E 5 HOH A 33 333 154 HOH HOH . E 5 HOH A 34 334 24 HOH HOH . E 5 HOH A 35 335 33 HOH HOH . E 5 HOH A 36 336 2 HOH HOH . E 5 HOH A 37 337 23 HOH HOH . E 5 HOH A 38 338 56 HOH HOH . E 5 HOH A 39 339 46 HOH HOH . E 5 HOH A 40 340 67 HOH HOH . E 5 HOH A 41 341 58 HOH HOH . E 5 HOH A 42 342 76 HOH HOH . E 5 HOH A 43 343 13 HOH HOH . E 5 HOH A 44 344 20 HOH HOH . E 5 HOH A 45 345 8 HOH HOH . E 5 HOH A 46 346 42 HOH HOH . E 5 HOH A 47 347 66 HOH HOH . E 5 HOH A 48 348 32 HOH HOH . E 5 HOH A 49 349 12 HOH HOH . E 5 HOH A 50 350 26 HOH HOH . E 5 HOH A 51 351 11 HOH HOH . E 5 HOH A 52 352 48 HOH HOH . E 5 HOH A 53 353 50 HOH HOH . E 5 HOH A 54 354 15 HOH HOH . E 5 HOH A 55 355 129 HOH HOH . E 5 HOH A 56 356 65 HOH HOH . E 5 HOH A 57 357 44 HOH HOH . E 5 HOH A 58 358 84 HOH HOH . E 5 HOH A 59 359 35 HOH HOH . E 5 HOH A 60 360 73 HOH HOH . E 5 HOH A 61 361 4 HOH HOH . E 5 HOH A 62 362 18 HOH HOH . E 5 HOH A 63 363 53 HOH HOH . E 5 HOH A 64 364 19 HOH HOH . E 5 HOH A 65 365 6 HOH HOH . E 5 HOH A 66 366 78 HOH HOH . E 5 HOH A 67 367 28 HOH HOH . E 5 HOH A 68 368 82 HOH HOH . E 5 HOH A 69 369 49 HOH HOH . E 5 HOH A 70 370 119 HOH HOH . E 5 HOH A 71 371 47 HOH HOH . E 5 HOH A 72 372 143 HOH HOH . E 5 HOH A 73 373 69 HOH HOH . E 5 HOH A 74 374 61 HOH HOH . E 5 HOH A 75 375 156 HOH HOH . E 5 HOH A 76 376 36 HOH HOH . E 5 HOH A 77 377 138 HOH HOH . E 5 HOH A 78 378 89 HOH HOH . E 5 HOH A 79 379 126 HOH HOH . E 5 HOH A 80 380 41 HOH HOH . E 5 HOH A 81 381 62 HOH HOH . E 5 HOH A 82 382 70 HOH HOH . E 5 HOH A 83 383 139 HOH HOH . E 5 HOH A 84 384 140 HOH HOH . E 5 HOH A 85 385 71 HOH HOH . E 5 HOH A 86 386 72 HOH HOH . E 5 HOH A 87 387 77 HOH HOH . E 5 HOH A 88 388 91 HOH HOH . E 5 HOH A 89 389 63 HOH HOH . E 5 HOH A 90 390 110 HOH HOH . E 5 HOH A 91 391 75 HOH HOH . E 5 HOH A 92 392 103 HOH HOH . E 5 HOH A 93 393 86 HOH HOH . E 5 HOH A 94 394 54 HOH HOH . E 5 HOH A 95 395 142 HOH HOH . E 5 HOH A 96 396 99 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 N N1 AZI . . . C 3 28.572 27.718 -17.876 0.5 22.88 ? N1 AZI 202 A 1 HETATM 2 N N2 AZI . . . C 3 28.831 28.83 -17.916 0.5 28.03 ? N2 AZI 202 A 1 HETATM 3 N N3 AZI . . . C 3 29.088 29.942 -17.875 0.5 22.83 ? N3 AZI 202 A 1 # _model_server_stats.io_time_ms 75 _model_server_stats.parse_time_ms 68 _model_server_stats.create_model_time_ms 18 _model_server_stats.query_time_ms 278 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 3 #