data_6VOV
#
_model_server_result.job_id            md9QemoEKOCmLSs8p3XCeg 
_model_server_result.datetime_utc      '2024-11-26 23:29:12' 
_model_server_result.server_version    0.9.12 
_model_server_result.query_name        ligand 
_model_server_result.source_id         pdb-bcif 
_model_server_result.entry_id          6vov 
#
_model_server_params.name     atom_site 
_model_server_params.value    '{"label_asym_id":"C","auth_seq_id":701}' 
#
_entry.id    6VOV 
#
_exptl.entry_id    6VOV 
_exptl.method      'X-RAY DIFFRACTION' 
#
_entity.details                     ? 
_entity.formula_weight              443.504 
_entity.id                          2 
_entity.src_method                  nat 
_entity.type                        non-polymer 
_entity.pdbx_description            6-(6-aminopyrazin-2-yl)-N-{4-[4-(oxetan-3-yl)piperazin-1-yl]phenyl}imidazo[1,2-a]pyrazin-8-amine 
_entity.pdbx_number_of_molecules    2 
_entity.pdbx_parent_entity_id       . 
_entity.pdbx_mutation               ? 
_entity.pdbx_fragment               ? 
_entity.pdbx_ec                     ? 
#
_cell.angle_alpha         81.015 
_cell.angle_beta          90.33 
_cell.angle_gamma         79.252 
_cell.entry_id            6VOV 
_cell.length_a            39.973 
_cell.length_b            42.05 
_cell.length_c            87.613 
_cell.Z_PDB               2 
_cell.pdbx_unique_axis    ? 
#
_symmetry.entry_id                 6VOV 
_symmetry.cell_setting             ? 
_symmetry.Int_Tables_number        1 
_symmetry.space_group_name_Hall    'P 1' 
_symmetry.space_group_name_H-M     'P 1' 
#
loop_
_pdbx_struct_assembly.method_details
_pdbx_struct_assembly.oligomeric_details
_pdbx_struct_assembly.oligomeric_count
_pdbx_struct_assembly.details
_pdbx_struct_assembly.id
? monomeric 1 author_defined_assembly 1 
? monomeric 1 author_defined_assembly 2 
#
loop_
_pdbx_struct_assembly_gen.asym_id_list
_pdbx_struct_assembly_gen.assembly_id
_pdbx_struct_assembly_gen.oper_expression
A,C,E 1 1 
B,D,F 2 1 
#
_pdbx_struct_oper_list.id                    1 
_pdbx_struct_oper_list.type                  'identity operation' 
_pdbx_struct_oper_list.name                  1_555 
_pdbx_struct_oper_list.symmetry_operation    x,y,z 
_pdbx_struct_oper_list.matrix[1][1]          1 
_pdbx_struct_oper_list.matrix[1][2]          0 
_pdbx_struct_oper_list.matrix[1][3]          0 
_pdbx_struct_oper_list.matrix[2][1]          0 
_pdbx_struct_oper_list.matrix[2][2]          1 
_pdbx_struct_oper_list.matrix[2][3]          0 
_pdbx_struct_oper_list.matrix[3][1]          0 
_pdbx_struct_oper_list.matrix[3][2]          0 
_pdbx_struct_oper_list.matrix[3][3]          1 
_pdbx_struct_oper_list.vector[1]             0 
_pdbx_struct_oper_list.vector[2]             0 
_pdbx_struct_oper_list.vector[3]             0 
#
loop_
_struct_asym.details
_struct_asym.entity_id
_struct_asym.id
_struct_asym.pdbx_modified
_struct_asym.pdbx_blank_PDB_chainid_flag
? 2 C N N 
? 2 D N N 
#
_chem_comp.formula           'C23 H25 N9 O' 
_chem_comp.formula_weight    443.504 
_chem_comp.id                R6D 
_chem_comp.mon_nstd_flag     . 
_chem_comp.name              6-(6-aminopyrazin-2-yl)-N-{4-[4-(oxetan-3-yl)piperazin-1-yl]phenyl}imidazo[1,2-a]pyrazin-8-amine 
_chem_comp.type              non-polymer 
_chem_comp.pdbx_synonyms     GS-9876 
#
loop_
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.comp_id
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_ordinal
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_aromatic_flag
N33 C14 R6D sing 277 n n 
C14 C15 R6D doub 278 n y 
C14 N13 R6D sing 279 n y 
C15 N16 R6D sing 280 n y 
N13 C12 R6D doub 281 n y 
N16 C17 R6D doub 282 n y 
C12 C17 R6D sing 283 n y 
C12 C02 R6D sing 284 n n 
C03 C02 R6D doub 285 n y 
C03 N04 R6D sing 286 n y 
C02 N01 R6D sing 287 n y 
N04 C07 R6D sing 288 n y 
N04 C05 R6D sing 289 n y 
C07 C08 R6D doub 290 n y 
N01 C06 R6D doub 291 n y 
C05 C06 R6D sing 292 n y 
C05 N09 R6D doub 293 n y 
C06 N10 R6D sing 294 n n 
C08 N09 R6D sing 295 n y 
C22 C21 R6D doub 296 n y 
C22 C11 R6D sing 297 n y 
C21 C20 R6D sing 298 n y 
N10 C11 R6D sing 299 n n 
C11 C18 R6D doub 300 n y 
C20 N23 R6D sing 301 n n 
C20 C19 R6D doub 302 n y 
N23 C24 R6D sing 303 n n 
N23 C28 R6D sing 304 n n 
C18 C19 R6D sing 305 n y 
C25 C24 R6D sing 306 n n 
C25 N26 R6D sing 307 n n 
C27 C28 R6D sing 308 n n 
C27 N26 R6D sing 309 n n 
N26 C29 R6D sing 310 n n 
C29 C30 R6D sing 311 n n 
C29 C32 R6D sing 312 n n 
C30 O31 R6D sing 313 n n 
C32 O31 R6D sing 314 n n 
C03 H1 R6D sing 315 n n 
C07 H2 R6D sing 316 n n 
C08 H3 R6D sing 317 n n 
C15 H4 R6D sing 318 n n 
C17 H5 R6D sing 319 n n 
C18 H6 R6D sing 320 n n 
C19 H7 R6D sing 321 n n 
C21 H8 R6D sing 322 n n 
C22 H9 R6D sing 323 n n 
C24 H10 R6D sing 324 n n 
C24 H11 R6D sing 325 n n 
C25 H12 R6D sing 326 n n 
C25 H13 R6D sing 327 n n 
C27 H14 R6D sing 328 n n 
C27 H15 R6D sing 329 n n 
C28 H16 R6D sing 330 n n 
C28 H17 R6D sing 331 n n 
C29 H18 R6D sing 332 n n 
C30 H19 R6D sing 333 n n 
C30 H20 R6D sing 334 n n 
C32 H21 R6D sing 335 n n 
C32 H22 R6D sing 336 n n 
N10 H23 R6D sing 337 n n 
N33 H25 R6D sing 338 n n 
N33 H26 R6D sing 339 n n 
#
_atom_sites.entry_id                     6VOV 
_atom_sites.fract_transf_matrix[1][1]    0.025017 
_atom_sites.fract_transf_matrix[1][2]    -0.004749 
_atom_sites.fract_transf_matrix[1][3]    0.000916 
_atom_sites.fract_transf_matrix[2][1]    0 
_atom_sites.fract_transf_matrix[2][2]    0.024206 
_atom_sites.fract_transf_matrix[2][3]    -0.003925 
_atom_sites.fract_transf_matrix[3][1]    0 
_atom_sites.fract_transf_matrix[3][2]    0 
_atom_sites.fract_transf_matrix[3][3]    0.011563 
_atom_sites.fract_transf_vector[1]       0 
_atom_sites.fract_transf_vector[2]       0 
_atom_sites.fract_transf_vector[3]       0 
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 2 R6D A 1 701 1 R6D S2W . 
D 2 R6D B 1 701 2 R6D S2W . 
E 3 HOH A 1 801 94 HOH HOH . 
E 3 HOH A 2 802 107 HOH HOH . 
E 3 HOH A 3 803 150 HOH HOH . 
E 3 HOH A 4 804 46 HOH HOH . 
E 3 HOH A 5 805 29 HOH HOH . 
E 3 HOH A 6 806 109 HOH HOH . 
E 3 HOH A 7 807 110 HOH HOH . 
E 3 HOH A 8 808 53 HOH HOH . 
E 3 HOH A 9 809 16 HOH HOH . 
E 3 HOH A 10 810 91 HOH HOH . 
E 3 HOH A 11 811 65 HOH HOH . 
E 3 HOH A 12 812 22 HOH HOH . 
E 3 HOH A 13 813 66 HOH HOH . 
E 3 HOH A 14 814 31 HOH HOH . 
E 3 HOH A 15 815 34 HOH HOH . 
E 3 HOH A 16 816 5 HOH HOH . 
E 3 HOH A 17 817 70 HOH HOH . 
E 3 HOH A 18 818 63 HOH HOH . 
E 3 HOH A 19 819 135 HOH HOH . 
E 3 HOH A 20 820 4 HOH HOH . 
E 3 HOH A 21 821 85 HOH HOH . 
E 3 HOH A 22 822 78 HOH HOH . 
E 3 HOH A 23 823 64 HOH HOH . 
E 3 HOH A 24 824 30 HOH HOH . 
E 3 HOH A 25 825 32 HOH HOH . 
E 3 HOH A 26 826 136 HOH HOH . 
E 3 HOH A 27 827 88 HOH HOH . 
E 3 HOH A 28 828 1 HOH HOH . 
E 3 HOH A 29 829 152 HOH HOH . 
E 3 HOH A 30 830 55 HOH HOH . 
E 3 HOH A 31 831 42 HOH HOH . 
E 3 HOH A 32 832 142 HOH HOH . 
E 3 HOH A 33 833 133 HOH HOH . 
E 3 HOH A 34 834 9 HOH HOH . 
E 3 HOH A 35 835 48 HOH HOH . 
E 3 HOH A 36 836 173 HOH HOH . 
E 3 HOH A 37 837 119 HOH HOH . 
E 3 HOH A 38 838 36 HOH HOH . 
E 3 HOH A 39 839 14 HOH HOH . 
E 3 HOH A 40 840 35 HOH HOH . 
E 3 HOH A 41 841 113 HOH HOH . 
E 3 HOH A 42 842 18 HOH HOH . 
E 3 HOH A 43 843 67 HOH HOH . 
E 3 HOH A 44 844 121 HOH HOH . 
E 3 HOH A 45 845 74 HOH HOH . 
E 3 HOH A 46 846 99 HOH HOH . 
E 3 HOH A 47 847 171 HOH HOH . 
E 3 HOH A 48 848 43 HOH HOH . 
E 3 HOH A 49 849 116 HOH HOH . 
E 3 HOH A 50 850 115 HOH HOH . 
E 3 HOH A 51 851 134 HOH HOH . 
E 3 HOH A 52 852 56 HOH HOH . 
E 3 HOH A 53 853 172 HOH HOH . 
E 3 HOH A 54 854 62 HOH HOH . 
E 3 HOH A 55 855 45 HOH HOH . 
E 3 HOH A 56 856 97 HOH HOH . 
E 3 HOH A 57 857 145 HOH HOH . 
E 3 HOH A 58 858 175 HOH HOH . 
E 3 HOH A 59 859 52 HOH HOH . 
E 3 HOH A 60 860 151 HOH HOH . 
E 3 HOH A 61 861 71 HOH HOH . 
E 3 HOH A 62 862 61 HOH HOH . 
E 3 HOH A 63 863 141 HOH HOH . 
E 3 HOH A 64 864 155 HOH HOH . 
E 3 HOH A 65 865 98 HOH HOH . 
E 3 HOH A 66 866 153 HOH HOH . 
E 3 HOH A 67 867 126 HOH HOH . 
E 3 HOH A 68 868 111 HOH HOH . 
E 3 HOH A 69 869 164 HOH HOH . 
E 3 HOH A 70 870 128 HOH HOH . 
E 3 HOH A 71 871 132 HOH HOH . 
E 3 HOH A 72 872 95 HOH HOH . 
E 3 HOH A 73 873 96 HOH HOH . 
E 3 HOH A 74 874 163 HOH HOH . 
E 3 HOH A 75 875 177 HOH HOH . 
E 3 HOH A 76 876 165 HOH HOH . 
E 3 HOH A 77 877 170 HOH HOH . 
E 3 HOH A 78 878 143 HOH HOH . 
E 3 HOH A 79 879 122 HOH HOH . 
E 3 HOH A 80 880 93 HOH HOH . 
E 3 HOH A 81 881 79 HOH HOH . 
F 3 HOH B 1 801 54 HOH HOH . 
F 3 HOH B 2 802 159 HOH HOH . 
F 3 HOH B 3 803 33 HOH HOH . 
F 3 HOH B 4 804 19 HOH HOH . 
F 3 HOH B 5 805 40 HOH HOH . 
F 3 HOH B 6 806 47 HOH HOH . 
F 3 HOH B 7 807 8 HOH HOH . 
F 3 HOH B 8 808 49 HOH HOH . 
F 3 HOH B 9 809 23 HOH HOH . 
F 3 HOH B 10 810 13 HOH HOH . 
F 3 HOH B 11 811 117 HOH HOH . 
F 3 HOH B 12 812 28 HOH HOH . 
F 3 HOH B 13 813 106 HOH HOH . 
F 3 HOH B 14 814 50 HOH HOH . 
F 3 HOH B 15 815 114 HOH HOH . 
F 3 HOH B 16 816 69 HOH HOH . 
F 3 HOH B 17 817 123 HOH HOH . 
F 3 HOH B 18 818 17 HOH HOH . 
F 3 HOH B 19 819 7 HOH HOH . 
F 3 HOH B 20 820 25 HOH HOH . 
F 3 HOH B 21 821 77 HOH HOH . 
F 3 HOH B 22 822 73 HOH HOH . 
F 3 HOH B 23 823 124 HOH HOH . 
F 3 HOH B 24 824 166 HOH HOH . 
F 3 HOH B 25 825 3 HOH HOH . 
F 3 HOH B 26 826 37 HOH HOH . 
F 3 HOH B 27 827 51 HOH HOH . 
F 3 HOH B 28 828 174 HOH HOH . 
F 3 HOH B 29 829 90 HOH HOH . 
F 3 HOH B 30 830 146 HOH HOH . 
F 3 HOH B 31 831 24 HOH HOH . 
F 3 HOH B 32 832 108 HOH HOH . 
F 3 HOH B 33 833 38 HOH HOH . 
F 3 HOH B 34 834 2 HOH HOH . 
F 3 HOH B 35 835 44 HOH HOH . 
F 3 HOH B 36 836 10 HOH HOH . 
F 3 HOH B 37 837 105 HOH HOH . 
F 3 HOH B 38 838 68 HOH HOH . 
F 3 HOH B 39 839 12 HOH HOH . 
F 3 HOH B 40 840 154 HOH HOH . 
F 3 HOH B 41 841 21 HOH HOH . 
F 3 HOH B 42 842 131 HOH HOH . 
F 3 HOH B 43 843 92 HOH HOH . 
F 3 HOH B 44 844 161 HOH HOH . 
F 3 HOH B 45 845 58 HOH HOH . 
F 3 HOH B 46 846 41 HOH HOH . 
F 3 HOH B 47 847 11 HOH HOH . 
F 3 HOH B 48 848 168 HOH HOH . 
F 3 HOH B 49 849 120 HOH HOH . 
F 3 HOH B 50 850 6 HOH HOH . 
F 3 HOH B 51 851 20 HOH HOH . 
F 3 HOH B 52 852 26 HOH HOH . 
F 3 HOH B 53 853 39 HOH HOH . 
F 3 HOH B 54 854 158 HOH HOH . 
F 3 HOH B 55 855 167 HOH HOH . 
F 3 HOH B 56 856 103 HOH HOH . 
F 3 HOH B 57 857 83 HOH HOH . 
F 3 HOH B 58 858 76 HOH HOH . 
F 3 HOH B 59 859 75 HOH HOH . 
F 3 HOH B 60 860 89 HOH HOH . 
F 3 HOH B 61 861 176 HOH HOH . 
F 3 HOH B 62 862 102 HOH HOH . 
F 3 HOH B 63 863 148 HOH HOH . 
F 3 HOH B 64 864 80 HOH HOH . 
F 3 HOH B 65 865 169 HOH HOH . 
F 3 HOH B 66 866 147 HOH HOH . 
F 3 HOH B 67 867 157 HOH HOH . 
F 3 HOH B 68 868 59 HOH HOH . 
F 3 HOH B 69 869 101 HOH HOH . 
F 3 HOH B 70 870 87 HOH HOH . 
F 3 HOH B 71 871 140 HOH HOH . 
F 3 HOH B 72 872 129 HOH HOH . 
F 3 HOH B 73 873 130 HOH HOH . 
F 3 HOH B 74 874 104 HOH HOH . 
F 3 HOH B 75 875 57 HOH HOH . 
F 3 HOH B 76 876 100 HOH HOH . 
F 3 HOH B 77 877 149 HOH HOH . 
F 3 HOH B 78 878 162 HOH HOH . 
F 3 HOH B 79 879 60 HOH HOH . 
F 3 HOH B 80 880 84 HOH HOH . 
F 3 HOH B 81 881 15 HOH HOH . 
F 3 HOH B 82 882 27 HOH HOH . 
F 3 HOH B 83 883 137 HOH HOH . 
F 3 HOH B 84 884 160 HOH HOH . 
F 3 HOH B 85 885 125 HOH HOH . 
F 3 HOH B 86 886 156 HOH HOH . 
F 3 HOH B 87 887 112 HOH HOH . 
F 3 HOH B 88 888 81 HOH HOH . 
F 3 HOH B 89 889 86 HOH HOH . 
F 3 HOH B 90 890 144 HOH HOH . 
F 3 HOH B 91 891 72 HOH HOH . 
F 3 HOH B 92 892 82 HOH HOH . 
F 3 HOH B 93 893 127 HOH HOH . 
F 3 HOH B 94 894 118 HOH HOH . 
F 3 HOH B 95 895 139 HOH HOH . 
F 3 HOH B 96 896 138 HOH HOH . 
#
loop_
_atom_site.group_PDB
_atom_site.id
_atom_site.type_symbol
_atom_site.label_atom_id
_atom_site.label_comp_id
_atom_site.label_seq_id
_atom_site.label_alt_id
_atom_site.pdbx_PDB_ins_code
_atom_site.label_asym_id
_atom_site.label_entity_id
_atom_site.Cartn_x
_atom_site.Cartn_y
_atom_site.Cartn_z
_atom_site.occupancy
_atom_site.B_iso_or_equiv
_atom_site.pdbx_formal_charge
_atom_site.auth_atom_id
_atom_site.auth_comp_id
_atom_site.auth_seq_id
_atom_site.auth_asym_id
_atom_site.pdbx_PDB_model_num
HETATM 1 C C02 R6D . . . C 2 -16.881 20.106 -7.007 1 17.39 ? C02 R6D 701 A 1 
HETATM 2 C C03 R6D . . . C 2 -18.191 19.789 -7.139 1 16.37 ? C03 R6D 701 A 1 
HETATM 3 C C05 R6D . . . C 2 -17.885 18.25 -5.35 1 12.37 ? C05 R6D 701 A 1 
HETATM 4 C C06 R6D . . . C 2 -16.487 18.621 -5.233 1 16.32 ? C06 R6D 701 A 1 
HETATM 5 C C07 R6D . . . C 2 -19.927 18.288 -6.141 1 14.8 ? C07 R6D 701 A 1 
HETATM 6 C C08 R6D . . . C 2 -19.799 17.389 -5.109 1 10.97 ? C08 R6D 701 A 1 
HETATM 7 C C11 R6D . . . C 2 -14.284 18.295 -4.067 1 11.92 ? C11 R6D 701 A 1 
HETATM 8 C C12 R6D . . . C 2 -16.25 21.088 -7.901 1 22.25 ? C12 R6D 701 A 1 
HETATM 9 C C14 R6D . . . C 2 -16.445 22.303 -9.877 1 20.81 ? C14 R6D 701 A 1 
HETATM 10 C C15 R6D . . . C 2 -15.188 22.828 -9.658 1 19.45 ? C15 R6D 701 A 1 
HETATM 11 C C17 R6D . . . C 2 -14.982 21.619 -7.7 1 22.27 ? C17 R6D 701 A 1 
HETATM 12 C C18 R6D . . . C 2 -13.698 17.592 -3.025 1 16.19 ? C18 R6D 701 A 1 
HETATM 13 C C19 R6D . . . C 2 -12.342 17.762 -2.723 1 18.03 ? C19 R6D 701 A 1 
HETATM 14 C C20 R6D . . . C 2 -11.518 18.629 -3.457 1 23.1 ? C20 R6D 701 A 1 
HETATM 15 C C21 R6D . . . C 2 -12.124 19.319 -4.512 1 22.14 ? C21 R6D 701 A 1 
HETATM 16 C C22 R6D . . . C 2 -13.475 19.15 -4.821 1 20.29 ? C22 R6D 701 A 1 
HETATM 17 C C24 R6D . . . C 2 -9.674 20.178 -2.951 1 29.16 ? C24 R6D 701 A 1 
HETATM 18 C C25 R6D . . . C 2 -8.141 20.245 -3.011 1 32.67 ? C25 R6D 701 A 1 
HETATM 19 C C27 R6D . . . C 2 -7.903 17.875 -2.651 1 33.5 ? C27 R6D 701 A 1 
HETATM 20 C C28 R6D . . . C 2 -9.429 17.698 -2.532 1 24.99 ? C28 R6D 701 A 1 
HETATM 21 C C29 R6D . . . C 2 -6.211 19.528 -1.701 1 50.32 ? C29 R6D 701 A 1 
HETATM 22 C C30 R6D . . . C 2 -6.18 20.82 -0.874 1 44.76 ? C30 R6D 701 A 1 
HETATM 23 C C32 R6D . . . C 2 -5.788 18.848 -0.395 1 45.27 ? C32 R6D 701 A 1 
HETATM 24 N N01 R6D . . . C 2 -16.025 19.524 -6.074 1 15 ? N01 R6D 701 A 1 
HETATM 25 N N04 R6D . . . C 2 -18.691 18.852 -6.268 1 14.79 ? N04 R6D 701 A 1 
HETATM 26 N N09 R6D . . . C 2 -18.514 17.37 -4.625 1 15.16 ? N09 R6D 701 A 1 
HETATM 27 N N10 R6D . . . C 2 -15.641 18.068 -4.31 1 13.91 ? N10 R6D 701 A 1 
HETATM 28 N N13 R6D . . . C 2 -16.966 21.428 -8.996 1 21.69 ? N13 R6D 701 A 1 
HETATM 29 N N16 R6D . . . C 2 -14.448 22.491 -8.587 1 25.13 ? N16 R6D 701 A 1 
HETATM 30 N N23 R6D . . . C 2 -10.153 18.803 -3.171 1 21.24 ? N23 R6D 701 A 1 
HETATM 31 N N26 R6D . . . C 2 -7.587 19.208 -2.131 1 41.2 ? N26 R6D 701 A 1 
HETATM 32 N N33 R6D . . . C 2 -17.192 22.673 -10.98 1 19.53 ? N33 R6D 701 A 1 
HETATM 33 O O31 R6D . . . C 2 -6.111 20.048 0.362 1 48.09 ? O31 R6D 701 A 1 
#
_model_server_stats.io_time_ms              11 
_model_server_stats.parse_time_ms           11 
_model_server_stats.create_model_time_ms    10 
_model_server_stats.query_time_ms           346 
_model_server_stats.encode_time_ms          2 
_model_server_stats.element_count           33 
#