data_6VOV # _model_server_result.job_id brza2zonxPWC-3d5sZCIJw _model_server_result.datetime_utc '2024-11-05 12:48:47' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6vov # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"D","auth_seq_id":701}' # _entry.id 6VOV # _exptl.entry_id 6VOV _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 443.504 _entity.id 2 _entity.src_method nat _entity.type non-polymer _entity.pdbx_description 6-(6-aminopyrazin-2-yl)-N-{4-[4-(oxetan-3-yl)piperazin-1-yl]phenyl}imidazo[1,2-a]pyrazin-8-amine _entity.pdbx_number_of_molecules 2 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 81.015 _cell.angle_beta 90.33 _cell.angle_gamma 79.252 _cell.entry_id 6VOV _cell.length_a 39.973 _cell.length_b 42.05 _cell.length_c 87.613 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6VOV _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall 'P 1' _symmetry.space_group_name_H-M 'P 1' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,E 1 1 B,D,F 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N # _chem_comp.formula 'C23 H25 N9 O' _chem_comp.formula_weight 443.504 _chem_comp.id R6D _chem_comp.mon_nstd_flag . _chem_comp.name 6-(6-aminopyrazin-2-yl)-N-{4-[4-(oxetan-3-yl)piperazin-1-yl]phenyl}imidazo[1,2-a]pyrazin-8-amine _chem_comp.type non-polymer _chem_comp.pdbx_synonyms GS-9876 # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag N33 C14 R6D sing 277 n n C14 C15 R6D doub 278 n y C14 N13 R6D sing 279 n y C15 N16 R6D sing 280 n y N13 C12 R6D doub 281 n y N16 C17 R6D doub 282 n y C12 C17 R6D sing 283 n y C12 C02 R6D sing 284 n n C03 C02 R6D doub 285 n y C03 N04 R6D sing 286 n y C02 N01 R6D sing 287 n y N04 C07 R6D sing 288 n y N04 C05 R6D sing 289 n y C07 C08 R6D doub 290 n y N01 C06 R6D doub 291 n y C05 C06 R6D sing 292 n y C05 N09 R6D doub 293 n y C06 N10 R6D sing 294 n n C08 N09 R6D sing 295 n y C22 C21 R6D doub 296 n y C22 C11 R6D sing 297 n y C21 C20 R6D sing 298 n y N10 C11 R6D sing 299 n n C11 C18 R6D doub 300 n y C20 N23 R6D sing 301 n n C20 C19 R6D doub 302 n y N23 C24 R6D sing 303 n n N23 C28 R6D sing 304 n n C18 C19 R6D sing 305 n y C25 C24 R6D sing 306 n n C25 N26 R6D sing 307 n n C27 C28 R6D sing 308 n n C27 N26 R6D sing 309 n n N26 C29 R6D sing 310 n n C29 C30 R6D sing 311 n n C29 C32 R6D sing 312 n n C30 O31 R6D sing 313 n n C32 O31 R6D sing 314 n n C03 H1 R6D sing 315 n n C07 H2 R6D sing 316 n n C08 H3 R6D sing 317 n n C15 H4 R6D sing 318 n n C17 H5 R6D sing 319 n n C18 H6 R6D sing 320 n n C19 H7 R6D sing 321 n n C21 H8 R6D sing 322 n n C22 H9 R6D sing 323 n n C24 H10 R6D sing 324 n n C24 H11 R6D sing 325 n n C25 H12 R6D sing 326 n n C25 H13 R6D sing 327 n n C27 H14 R6D sing 328 n n C27 H15 R6D sing 329 n n C28 H16 R6D sing 330 n n C28 H17 R6D sing 331 n n C29 H18 R6D sing 332 n n C30 H19 R6D sing 333 n n C30 H20 R6D sing 334 n n C32 H21 R6D sing 335 n n C32 H22 R6D sing 336 n n N10 H23 R6D sing 337 n n N33 H25 R6D sing 338 n n N33 H26 R6D sing 339 n n # _atom_sites.entry_id 6VOV _atom_sites.fract_transf_matrix[1][1] 0.025017 _atom_sites.fract_transf_matrix[1][2] -0.004749 _atom_sites.fract_transf_matrix[1][3] 0.000916 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.024206 _atom_sites.fract_transf_matrix[2][3] -0.003925 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.011563 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 R6D A 1 701 1 R6D S2W . D 2 R6D B 1 701 2 R6D S2W . E 3 HOH A 1 801 94 HOH HOH . E 3 HOH A 2 802 107 HOH HOH . E 3 HOH A 3 803 150 HOH HOH . E 3 HOH A 4 804 46 HOH HOH . E 3 HOH A 5 805 29 HOH HOH . E 3 HOH A 6 806 109 HOH HOH . E 3 HOH A 7 807 110 HOH HOH . E 3 HOH A 8 808 53 HOH HOH . E 3 HOH A 9 809 16 HOH HOH . E 3 HOH A 10 810 91 HOH HOH . E 3 HOH A 11 811 65 HOH HOH . E 3 HOH A 12 812 22 HOH HOH . E 3 HOH A 13 813 66 HOH HOH . E 3 HOH A 14 814 31 HOH HOH . E 3 HOH A 15 815 34 HOH HOH . E 3 HOH A 16 816 5 HOH HOH . E 3 HOH A 17 817 70 HOH HOH . E 3 HOH A 18 818 63 HOH HOH . E 3 HOH A 19 819 135 HOH HOH . E 3 HOH A 20 820 4 HOH HOH . E 3 HOH A 21 821 85 HOH HOH . E 3 HOH A 22 822 78 HOH HOH . E 3 HOH A 23 823 64 HOH HOH . E 3 HOH A 24 824 30 HOH HOH . E 3 HOH A 25 825 32 HOH HOH . E 3 HOH A 26 826 136 HOH HOH . E 3 HOH A 27 827 88 HOH HOH . E 3 HOH A 28 828 1 HOH HOH . E 3 HOH A 29 829 152 HOH HOH . E 3 HOH A 30 830 55 HOH HOH . E 3 HOH A 31 831 42 HOH HOH . E 3 HOH A 32 832 142 HOH HOH . E 3 HOH A 33 833 133 HOH HOH . E 3 HOH A 34 834 9 HOH HOH . E 3 HOH A 35 835 48 HOH HOH . E 3 HOH A 36 836 173 HOH HOH . E 3 HOH A 37 837 119 HOH HOH . E 3 HOH A 38 838 36 HOH HOH . E 3 HOH A 39 839 14 HOH HOH . E 3 HOH A 40 840 35 HOH HOH . E 3 HOH A 41 841 113 HOH HOH . E 3 HOH A 42 842 18 HOH HOH . E 3 HOH A 43 843 67 HOH HOH . E 3 HOH A 44 844 121 HOH HOH . E 3 HOH A 45 845 74 HOH HOH . E 3 HOH A 46 846 99 HOH HOH . E 3 HOH A 47 847 171 HOH HOH . E 3 HOH A 48 848 43 HOH HOH . E 3 HOH A 49 849 116 HOH HOH . E 3 HOH A 50 850 115 HOH HOH . E 3 HOH A 51 851 134 HOH HOH . E 3 HOH A 52 852 56 HOH HOH . E 3 HOH A 53 853 172 HOH HOH . E 3 HOH A 54 854 62 HOH HOH . E 3 HOH A 55 855 45 HOH HOH . E 3 HOH A 56 856 97 HOH HOH . E 3 HOH A 57 857 145 HOH HOH . E 3 HOH A 58 858 175 HOH HOH . E 3 HOH A 59 859 52 HOH HOH . E 3 HOH A 60 860 151 HOH HOH . E 3 HOH A 61 861 71 HOH HOH . E 3 HOH A 62 862 61 HOH HOH . E 3 HOH A 63 863 141 HOH HOH . E 3 HOH A 64 864 155 HOH HOH . E 3 HOH A 65 865 98 HOH HOH . E 3 HOH A 66 866 153 HOH HOH . E 3 HOH A 67 867 126 HOH HOH . E 3 HOH A 68 868 111 HOH HOH . E 3 HOH A 69 869 164 HOH HOH . E 3 HOH A 70 870 128 HOH HOH . E 3 HOH A 71 871 132 HOH HOH . E 3 HOH A 72 872 95 HOH HOH . E 3 HOH A 73 873 96 HOH HOH . E 3 HOH A 74 874 163 HOH HOH . E 3 HOH A 75 875 177 HOH HOH . E 3 HOH A 76 876 165 HOH HOH . E 3 HOH A 77 877 170 HOH HOH . E 3 HOH A 78 878 143 HOH HOH . E 3 HOH A 79 879 122 HOH HOH . E 3 HOH A 80 880 93 HOH HOH . E 3 HOH A 81 881 79 HOH HOH . F 3 HOH B 1 801 54 HOH HOH . F 3 HOH B 2 802 159 HOH HOH . F 3 HOH B 3 803 33 HOH HOH . F 3 HOH B 4 804 19 HOH HOH . F 3 HOH B 5 805 40 HOH HOH . F 3 HOH B 6 806 47 HOH HOH . F 3 HOH B 7 807 8 HOH HOH . F 3 HOH B 8 808 49 HOH HOH . F 3 HOH B 9 809 23 HOH HOH . F 3 HOH B 10 810 13 HOH HOH . F 3 HOH B 11 811 117 HOH HOH . F 3 HOH B 12 812 28 HOH HOH . F 3 HOH B 13 813 106 HOH HOH . F 3 HOH B 14 814 50 HOH HOH . F 3 HOH B 15 815 114 HOH HOH . F 3 HOH B 16 816 69 HOH HOH . F 3 HOH B 17 817 123 HOH HOH . F 3 HOH B 18 818 17 HOH HOH . F 3 HOH B 19 819 7 HOH HOH . F 3 HOH B 20 820 25 HOH HOH . F 3 HOH B 21 821 77 HOH HOH . F 3 HOH B 22 822 73 HOH HOH . F 3 HOH B 23 823 124 HOH HOH . F 3 HOH B 24 824 166 HOH HOH . F 3 HOH B 25 825 3 HOH HOH . F 3 HOH B 26 826 37 HOH HOH . F 3 HOH B 27 827 51 HOH HOH . F 3 HOH B 28 828 174 HOH HOH . F 3 HOH B 29 829 90 HOH HOH . F 3 HOH B 30 830 146 HOH HOH . F 3 HOH B 31 831 24 HOH HOH . F 3 HOH B 32 832 108 HOH HOH . F 3 HOH B 33 833 38 HOH HOH . F 3 HOH B 34 834 2 HOH HOH . F 3 HOH B 35 835 44 HOH HOH . F 3 HOH B 36 836 10 HOH HOH . F 3 HOH B 37 837 105 HOH HOH . F 3 HOH B 38 838 68 HOH HOH . F 3 HOH B 39 839 12 HOH HOH . F 3 HOH B 40 840 154 HOH HOH . F 3 HOH B 41 841 21 HOH HOH . F 3 HOH B 42 842 131 HOH HOH . F 3 HOH B 43 843 92 HOH HOH . F 3 HOH B 44 844 161 HOH HOH . F 3 HOH B 45 845 58 HOH HOH . F 3 HOH B 46 846 41 HOH HOH . F 3 HOH B 47 847 11 HOH HOH . F 3 HOH B 48 848 168 HOH HOH . F 3 HOH B 49 849 120 HOH HOH . F 3 HOH B 50 850 6 HOH HOH . F 3 HOH B 51 851 20 HOH HOH . F 3 HOH B 52 852 26 HOH HOH . F 3 HOH B 53 853 39 HOH HOH . F 3 HOH B 54 854 158 HOH HOH . F 3 HOH B 55 855 167 HOH HOH . F 3 HOH B 56 856 103 HOH HOH . F 3 HOH B 57 857 83 HOH HOH . F 3 HOH B 58 858 76 HOH HOH . F 3 HOH B 59 859 75 HOH HOH . F 3 HOH B 60 860 89 HOH HOH . F 3 HOH B 61 861 176 HOH HOH . F 3 HOH B 62 862 102 HOH HOH . F 3 HOH B 63 863 148 HOH HOH . F 3 HOH B 64 864 80 HOH HOH . F 3 HOH B 65 865 169 HOH HOH . F 3 HOH B 66 866 147 HOH HOH . F 3 HOH B 67 867 157 HOH HOH . F 3 HOH B 68 868 59 HOH HOH . F 3 HOH B 69 869 101 HOH HOH . F 3 HOH B 70 870 87 HOH HOH . F 3 HOH B 71 871 140 HOH HOH . F 3 HOH B 72 872 129 HOH HOH . F 3 HOH B 73 873 130 HOH HOH . F 3 HOH B 74 874 104 HOH HOH . F 3 HOH B 75 875 57 HOH HOH . F 3 HOH B 76 876 100 HOH HOH . F 3 HOH B 77 877 149 HOH HOH . F 3 HOH B 78 878 162 HOH HOH . F 3 HOH B 79 879 60 HOH HOH . F 3 HOH B 80 880 84 HOH HOH . F 3 HOH B 81 881 15 HOH HOH . F 3 HOH B 82 882 27 HOH HOH . F 3 HOH B 83 883 137 HOH HOH . F 3 HOH B 84 884 160 HOH HOH . F 3 HOH B 85 885 125 HOH HOH . F 3 HOH B 86 886 156 HOH HOH . F 3 HOH B 87 887 112 HOH HOH . F 3 HOH B 88 888 81 HOH HOH . F 3 HOH B 89 889 86 HOH HOH . F 3 HOH B 90 890 144 HOH HOH . F 3 HOH B 91 891 72 HOH HOH . F 3 HOH B 92 892 82 HOH HOH . F 3 HOH B 93 893 127 HOH HOH . F 3 HOH B 94 894 118 HOH HOH . F 3 HOH B 95 895 139 HOH HOH . F 3 HOH B 96 896 138 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C02 R6D . . . D 2 -10.948 -2.311 -47.974 1 23.76 ? C02 R6D 701 B 1 HETATM 2 C C03 R6D . . . D 2 -9.62 -2.076 -48.094 1 21.37 ? C03 R6D 701 B 1 HETATM 3 C C05 R6D . . . D 2 -9.935 -0.07 -46.85 1 13.52 ? C05 R6D 701 B 1 HETATM 4 C C06 R6D . . . D 2 -11.353 -0.364 -46.74 1 20.89 ? C06 R6D 701 B 1 HETATM 5 C C07 R6D . . . D 2 -7.862 -0.391 -47.46 1 18.92 ? C07 R6D 701 B 1 HETATM 6 C C08 R6D . . . D 2 -8.002 0.786 -46.757 1 12.68 ? C08 R6D 701 B 1 HETATM 7 C C11 R6D . . . D 2 -13.568 0.331 -45.696 1 19.97 ? C11 R6D 701 B 1 HETATM 8 C C12 R6D . . . D 2 -11.552 -3.514 -48.556 1 23.8 ? C12 R6D 701 B 1 HETATM 9 C C14 R6D . . . D 2 -11.238 -5.411 -49.884 1 28.77 ? C14 R6D 701 B 1 HETATM 10 C C15 R6D . . . D 2 -12.57 -5.732 -49.679 1 28.66 ? C15 R6D 701 B 1 HETATM 11 C C17 R6D . . . D 2 -12.874 -3.856 -48.373 1 26.3 ? C17 R6D 701 B 1 HETATM 12 C C18 R6D . . . D 2 -14.101 1.345 -44.906 1 19.7 ? C18 R6D 701 B 1 HETATM 13 C C19 R6D . . . D 2 -15.441 1.335 -44.496 1 17.67 ? C19 R6D 701 B 1 HETATM 14 C C20 R6D . . . D 2 -16.303 0.297 -44.854 1 22.34 ? C20 R6D 701 B 1 HETATM 15 C C21 R6D . . . D 2 -15.75 -0.708 -45.656 1 26.48 ? C21 R6D 701 B 1 HETATM 16 C C22 R6D . . . D 2 -14.418 -0.703 -46.072 1 22.37 ? C22 R6D 701 B 1 HETATM 17 C C24 R6D . . . D 2 -18.254 -0.995 -44.012 1 34.28 ? C24 R6D 701 B 1 HETATM 18 C C25 R6D . . . D 2 -19.728 -1.019 -44.427 1 34.75 ? C25 R6D 701 B 1 HETATM 19 C C27 R6D . . . D 2 -19.771 1.466 -44.43 1 32.34 ? C27 R6D 701 B 1 HETATM 20 C C28 R6D . . . D 2 -18.317 1.45 -43.953 1 23.23 ? C28 R6D 701 B 1 HETATM 21 C C29 R6D . . . D 2 -21.806 0.08 -44.824 1 49.55 ? C29 R6D 701 B 1 HETATM 22 C C30 R6D . . . D 2 -22.721 -0.936 -44.129 1 57.52 ? C30 R6D 701 B 1 HETATM 23 C C32 R6D . . . D 2 -22.891 1.094 -44.452 1 47.76 ? C32 R6D 701 B 1 HETATM 24 N N01 R6D . . . D 2 -11.826 -1.469 -47.304 1 20.97 ? N01 R6D 701 B 1 HETATM 25 N N04 R6D . . . D 2 -9.114 -0.93 -47.509 1 20.42 ? N04 R6D 701 B 1 HETATM 26 N N09 R6D . . . D 2 -9.302 0.975 -46.389 1 17.71 ? N09 R6D 701 B 1 HETATM 27 N N10 R6D . . . D 2 -12.22 0.45 -46.068 1 18.34 ? N10 R6D 701 B 1 HETATM 28 N N13 R6D . . . D 2 -10.736 -4.287 -49.313 1 26.36 ? N13 R6D 701 B 1 HETATM 29 N N16 R6D . . . D 2 -13.395 -4.971 -48.927 1 33.34 ? N16 R6D 701 B 1 HETATM 30 N N23 R6D . . . D 2 -17.653 0.259 -44.471 1 28.81 ? N23 R6D 701 B 1 HETATM 31 N N26 R6D . . . D 2 -20.496 0.216 -44.137 1 41.3 ? N26 R6D 701 B 1 HETATM 32 N N33 R6D . . . D 2 -10.414 -6.22 -50.662 1 27.92 ? N33 R6D 701 B 1 HETATM 33 O O31 R6D . . . D 2 -23.469 0.148 -43.512 1 61.08 ? O31 R6D 701 B 1 # _model_server_stats.io_time_ms 8 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 4 _model_server_stats.query_time_ms 221 _model_server_stats.encode_time_ms 2 _model_server_stats.element_count 33 #