data_6VPR # _model_server_result.job_id ndLC9B35o_5r3-pSeEHi_g _model_server_result.datetime_utc '2025-08-31 20:23:19' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6vpr # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"K","auth_seq_id":302}' # _entry.id 6VPR # _exptl.entry_id 6VPR _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 150.087 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description 'L(+)-TARTARIC ACID' _entity.pdbx_number_of_molecules 4 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 120 _cell.entry_id 6VPR _cell.length_a 116.6 _cell.length_b 116.6 _cell.length_c 75.23 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6VPR _symmetry.cell_setting ? _symmetry.Int_Tables_number 181 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 64 2 2' # loop_ _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count _pdbx_struct_assembly.details _pdbx_struct_assembly.id ? monomeric 1 author_defined_assembly 1 ? monomeric 1 author_defined_assembly 2 # loop_ _pdbx_struct_assembly_gen.asym_id_list _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression A,C,D,E,F,G,H,I,R 1 1 B,J,K,L,M,N,O,P,Q,S 2 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # loop_ _struct_asym.details _struct_asym.entity_id _struct_asym.id _struct_asym.pdbx_modified _struct_asym.pdbx_blank_PDB_chainid_flag ? 2 C N N ? 2 D N N ? 2 J N N ? 2 K N N # loop_ _struct_conn.conn_type_id _struct_conn.details _struct_conn.id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_atom_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_atom_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_PDB_id _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc ? metalc1 A SG CYS 132 A CYS 132 1_555 H HG HG . A HG 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.749 ? metalc ? metalc2 A SG CYS 154 A CYS 154 1_555 I HG HG . A HG 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.727 ? metalc ? metalc3 A OE2 GLU 163 A GLU 163 1_555 H HG HG . A HG 206 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.903 ? metalc ? metalc4 C O11 TLA . A TLA 201 1_555 I HG HG . A HG 207 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 3.188 ? metalc ? metalc5 B SG CYS 132 B CYS 132 1_555 P HG HG . B HG 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.478 ? metalc ? metalc6 B SG CYS 154 B CYS 154 1_555 Q HG HG . B HG 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.784 ? metalc ? metalc7 N OXT ACT . B ACT 305 1_555 Q HG HG . B HG 308 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.89 ? metalc ? metalc8 O OXT ACT . B ACT 306 1_555 P HG HG . B HG 307 1_555 ? ? ? ? ? ? ? ? ? ? ? ? 2.624 ? # _chem_comp.formula 'C4 H6 O6' _chem_comp.formula_weight 150.087 _chem_comp.id TLA _chem_comp.mon_nstd_flag . _chem_comp.name 'L(+)-TARTARIC ACID' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O1 C1 TLA doub 299 n n O11 C1 TLA sing 300 n n O11 H11 TLA sing 301 n n C1 C2 TLA sing 302 n n C2 O2 TLA sing 303 n n C2 C3 TLA sing 304 n n C2 H2 TLA sing 305 n n O2 HA TLA sing 306 n n C3 O3 TLA sing 307 n n C3 C4 TLA sing 308 n n C3 H3 TLA sing 309 n n O3 HB TLA sing 310 n n C4 O4 TLA doub 311 n n C4 O41 TLA sing 312 n n O41 H41 TLA sing 313 n n # _atom_sites.entry_id 6VPR _atom_sites.fract_transf_matrix[1][1] 0.008576 _atom_sites.fract_transf_matrix[1][2] 0.004952 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.009903 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.013293 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 TLA A 1 201 201 TLA TLA . D 2 TLA A 1 202 201 TLA TLA . E 3 SO4 A 1 203 1 SO4 SO4 . F 3 SO4 A 1 204 4 SO4 SO4 . G 4 ACT A 1 205 11 ACT ACT . H 5 HG A 1 206 1 HG HG . I 5 HG A 1 207 2 HG HG . J 2 TLA B 1 301 301 TLA TLA . K 2 TLA B 1 302 401 TLA TLA . L 6 PO4 B 1 303 501 PO4 PO4 . M 3 SO4 B 1 304 8 SO4 SO4 . N 4 ACT B 1 305 9 ACT ACT . O 4 ACT B 1 306 10 ACT ACT . P 5 HG B 1 307 3 HG HG . Q 5 HG B 1 308 4 HG HG . R 7 HOH A 1 301 8 HOH HOH . R 7 HOH A 2 302 24 HOH HOH . R 7 HOH A 3 303 30 HOH HOH . R 7 HOH A 4 304 21 HOH HOH . R 7 HOH A 5 305 19 HOH HOH . R 7 HOH A 6 306 32 HOH HOH . S 7 HOH B 1 401 29 HOH HOH . S 7 HOH B 2 402 5 HOH HOH . S 7 HOH B 3 403 22 HOH HOH . S 7 HOH B 4 404 31 HOH HOH . S 7 HOH B 5 405 1 HOH HOH . S 7 HOH B 6 406 16 HOH HOH . S 7 HOH B 7 407 27 HOH HOH . S 7 HOH B 8 408 28 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 O O1 TLA . . . K 2 -27.375 -47.293 9.473 1 102.98 ? O1 TLA 302 B 1 HETATM 2 O O11 TLA . . . K 2 -25.558 -47.039 10.701 1 109.32 ? O11 TLA 302 B 1 HETATM 3 C C1 TLA . . . K 2 -26.596 -46.552 10.149 1 111.87 ? C1 TLA 302 B 1 HETATM 4 C C2 TLA . . . K 2 -26.899 -45.047 10.269 1 98.03 ? C2 TLA 302 B 1 HETATM 5 O O2 TLA . . . K 2 -25.866 -44.386 10.968 1 105.65 ? O2 TLA 302 B 1 HETATM 6 C C3 TLA . . . K 2 -28.289 -44.744 10.872 1 94.07 ? C3 TLA 302 B 1 HETATM 7 O O3 TLA . . . K 2 -28.681 -45.628 11.903 1 102.38 ? O3 TLA 302 B 1 HETATM 8 C C4 TLA . . . K 2 -28.306 -43.289 11.351 1 99.85 ? C4 TLA 302 B 1 HETATM 9 O O4 TLA . . . K 2 -28.798 -42.429 10.572 1 84.86 ? O4 TLA 302 B 1 HETATM 10 O O41 TLA . . . K 2 -27.833 -42.949 12.484 1 113.75 ? O41 TLA 302 B 1 # _model_server_stats.io_time_ms 64 _model_server_stats.parse_time_ms 11 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 697 _model_server_stats.encode_time_ms 1 _model_server_stats.element_count 10 #