data_6VQF # _model_server_result.job_id JE_CgMbHWrHAvmFrelFeAA _model_server_result.datetime_utc '2024-10-10 16:32:04' _model_server_result.server_version 0.9.12 _model_server_result.query_name ligand _model_server_result.source_id pdb-bcif _model_server_result.entry_id 6vqf # _model_server_params.name atom_site _model_server_params.value '{"label_asym_id":"B","auth_seq_id":601}' # _entry.id 6VQF # _exptl.entry_id 6VQF _exptl.method 'X-RAY DIFFRACTION' # _entity.details ? _entity.formula_weight 667.607 _entity.id 2 _entity.src_method syn _entity.type non-polymer _entity.pdbx_description '(1R,3S,4R)-4-[(3aR,9bR)-9b-[(4-fluorophenyl)sulfonyl]-7-(1,1,1,2,3,3,3-heptafluoropropan-2-yl)-1,2,3a,4,5,9b-hexahydro-3H-benzo[e]indole-3-carbonyl]-3-methylcyclohexane-1-carboxylic acid' _entity.pdbx_number_of_molecules 1 _entity.pdbx_parent_entity_id . _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.pdbx_ec ? # _cell.angle_alpha 90 _cell.angle_beta 90 _cell.angle_gamma 90 _cell.entry_id 6VQF _cell.length_a 61.507 _cell.length_b 61.507 _cell.length_c 157.911 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 6VQF _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 41 21 2' # _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.id 1 # _pdbx_struct_assembly_gen.asym_id_list A,B,C,D _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1 _pdbx_struct_oper_list.matrix[1][2] 0 _pdbx_struct_oper_list.matrix[1][3] 0 _pdbx_struct_oper_list.matrix[2][1] 0 _pdbx_struct_oper_list.matrix[2][2] 1 _pdbx_struct_oper_list.matrix[2][3] 0 _pdbx_struct_oper_list.matrix[3][1] 0 _pdbx_struct_oper_list.matrix[3][2] 0 _pdbx_struct_oper_list.matrix[3][3] 1 _pdbx_struct_oper_list.vector[1] 0 _pdbx_struct_oper_list.vector[2] 0 _pdbx_struct_oper_list.vector[3] 0 # _struct_asym.details ? _struct_asym.entity_id 2 _struct_asym.id B _struct_asym.pdbx_modified N _struct_asym.pdbx_blank_PDB_chainid_flag N # _chem_comp.formula 'C30 H29 F8 N O5 S' _chem_comp.formula_weight 667.607 _chem_comp.id R7V _chem_comp.mon_nstd_flag . _chem_comp.name '(1R,3S,4R)-4-[(3aR,9bR)-9b-[(4-fluorophenyl)sulfonyl]-7-(1,1,1,2,3,3,3-heptafluoropropan-2-yl)-1,2,3a,4,5,9b-hexahydro-3H-benzo[e]indole-3-carbonyl]-3-methylcyclohexane-1-carboxylic acid' _chem_comp.type non-polymer _chem_comp.pdbx_synonyms ? # loop_ _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.comp_id _chem_comp_bond.value_order _chem_comp_bond.pdbx_ordinal _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_aromatic_flag O33 S32 R7V doub 290 n n O34 S32 R7V doub 291 n n S32 C16 R7V sing 292 n n S32 C7 R7V sing 293 n n F38 C35 R7V sing 294 n n C11 C12 R7V sing 295 n n C11 C7 R7V sing 296 n n C2 C1 R7V doub 297 n y C2 C3 R7V sing 298 n y C27 C28 R7V sing 299 n n C27 C26 R7V sing 300 n n C1 C6 R7V sing 301 n y C17 C16 R7V doub 302 n y C17 C18 R7V sing 303 n y C28 C29 R7V sing 304 n n C28 C23 R7V sing 305 n n C16 C21 R7V sing 306 n y C12 N13 R7V sing 307 n n C7 C3 R7V sing 308 n n C7 C8 R7V sing 309 n n F36 C35 R7V sing 310 n n O41 C39 R7V doub 311 n n C35 F37 R7V sing 312 n n C35 C14 R7V sing 313 n n C3 C4 R7V doub 314 n y F43 C42 R7V sing 315 n n C39 O40 R7V sing 316 n n C39 C26 R7V sing 317 n n C18 C19 R7V doub 318 n y N13 C8 R7V sing 319 n n N13 C22 R7V sing 320 n n C26 C25 R7V sing 321 n n C21 C20 R7V doub 322 n y C6 C14 R7V sing 323 n n C6 C5 R7V doub 324 n y C23 C22 R7V sing 325 n n C23 C24 R7V sing 326 n n C8 C9 R7V sing 327 n n C14 C42 R7V sing 328 n n C14 F15 R7V sing 329 n n C22 O30 R7V doub 330 n n F44 C42 R7V sing 331 n n C42 F45 R7V sing 332 n n C4 C5 R7V sing 333 n y C4 C10 R7V sing 334 n n C19 C20 R7V sing 335 n y C19 F31 R7V sing 336 n n C25 C24 R7V sing 337 n n C9 C10 R7V sing 338 n n C1 H1 R7V sing 339 n n C2 H2 R7V sing 340 n n C5 H3 R7V sing 341 n n C8 H4 R7V sing 342 n n C9 H5 R7V sing 343 n n C9 H6 R7V sing 344 n n C10 H7 R7V sing 345 n n C10 H8 R7V sing 346 n n C11 H9 R7V sing 347 n n C11 H10 R7V sing 348 n n C12 H11 R7V sing 349 n n C12 H12 R7V sing 350 n n C17 H13 R7V sing 351 n n C18 H14 R7V sing 352 n n C20 H15 R7V sing 353 n n C21 H16 R7V sing 354 n n C23 H17 R7V sing 355 n n C24 H18 R7V sing 356 n n C24 H19 R7V sing 357 n n C25 H20 R7V sing 358 n n C25 H21 R7V sing 359 n n C26 H22 R7V sing 360 n n C27 H23 R7V sing 361 n n C27 H24 R7V sing 362 n n C28 H25 R7V sing 363 n n C29 H26 R7V sing 364 n n C29 H27 R7V sing 365 n n C29 H28 R7V sing 366 n n O40 H29 R7V sing 367 n n # _atom_sites.entry_id 6VQF _atom_sites.fract_transf_matrix[1][1] 0.016258 _atom_sites.fract_transf_matrix[1][2] 0 _atom_sites.fract_transf_matrix[1][3] 0 _atom_sites.fract_transf_matrix[2][1] 0 _atom_sites.fract_transf_matrix[2][2] 0.016258 _atom_sites.fract_transf_matrix[2][3] 0 _atom_sites.fract_transf_matrix[3][1] 0 _atom_sites.fract_transf_matrix[3][2] 0 _atom_sites.fract_transf_matrix[3][3] 0.006333 _atom_sites.fract_transf_vector[1] 0 _atom_sites.fract_transf_vector[2] 0 _atom_sites.fract_transf_vector[3] 0 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 R7V A 1 601 4000 R7V Z7C . C 3 GOL A 1 602 1 GOL GOL . D 4 HOH A 1 701 34 HOH HOH . D 4 HOH A 2 702 40 HOH HOH . D 4 HOH A 3 703 17 HOH HOH . D 4 HOH A 4 704 37 HOH HOH . D 4 HOH A 5 705 39 HOH HOH . D 4 HOH A 6 706 16 HOH HOH . D 4 HOH A 7 707 14 HOH HOH . D 4 HOH A 8 708 27 HOH HOH . D 4 HOH A 9 709 42 HOH HOH . D 4 HOH A 10 710 7 HOH HOH . D 4 HOH A 11 711 2 HOH HOH . D 4 HOH A 12 712 10 HOH HOH . D 4 HOH A 13 713 22 HOH HOH . D 4 HOH A 14 714 24 HOH HOH . D 4 HOH A 15 715 23 HOH HOH . D 4 HOH A 16 716 13 HOH HOH . D 4 HOH A 17 717 3 HOH HOH . D 4 HOH A 18 718 30 HOH HOH . D 4 HOH A 19 719 32 HOH HOH . D 4 HOH A 20 720 33 HOH HOH . D 4 HOH A 21 721 25 HOH HOH . D 4 HOH A 22 722 41 HOH HOH . D 4 HOH A 23 723 8 HOH HOH . D 4 HOH A 24 724 21 HOH HOH . D 4 HOH A 25 725 36 HOH HOH . D 4 HOH A 26 726 5 HOH HOH . D 4 HOH A 27 727 43 HOH HOH . D 4 HOH A 28 728 12 HOH HOH . D 4 HOH A 29 729 4 HOH HOH . D 4 HOH A 30 730 11 HOH HOH . D 4 HOH A 31 731 20 HOH HOH . D 4 HOH A 32 732 44 HOH HOH . D 4 HOH A 33 733 6 HOH HOH . D 4 HOH A 34 734 35 HOH HOH . D 4 HOH A 35 735 38 HOH HOH . D 4 HOH A 36 736 29 HOH HOH . D 4 HOH A 37 737 26 HOH HOH . D 4 HOH A 38 738 45 HOH HOH . D 4 HOH A 39 739 28 HOH HOH . D 4 HOH A 40 740 9 HOH HOH . # loop_ _atom_site.group_PDB _atom_site.id _atom_site.type_symbol _atom_site.label_atom_id _atom_site.label_comp_id _atom_site.label_seq_id _atom_site.label_alt_id _atom_site.pdbx_PDB_ins_code _atom_site.label_asym_id _atom_site.label_entity_id _atom_site.Cartn_x _atom_site.Cartn_y _atom_site.Cartn_z _atom_site.occupancy _atom_site.B_iso_or_equiv _atom_site.pdbx_formal_charge _atom_site.auth_atom_id _atom_site.auth_comp_id _atom_site.auth_seq_id _atom_site.auth_asym_id _atom_site.pdbx_PDB_model_num HETATM 1 C C1 R7V . . . B 2 -23.597 -9.096 -25.556 1 47.93 ? C1 R7V 601 A 1 HETATM 2 C C2 R7V . . . B 2 -23.871 -7.768 -25.835 1 47.68 ? C2 R7V 601 A 1 HETATM 3 C C3 R7V . . . B 2 -24.361 -6.91 -24.861 1 47.73 ? C3 R7V 601 A 1 HETATM 4 C C4 R7V . . . B 2 -24.5 -7.398 -23.554 1 47.39 ? C4 R7V 601 A 1 HETATM 5 C C5 R7V . . . B 2 -24.214 -8.734 -23.291 1 47.53 ? C5 R7V 601 A 1 HETATM 6 C C6 R7V . . . B 2 -23.779 -9.609 -24.277 1 48.35 ? C6 R7V 601 A 1 HETATM 7 C C7 R7V . . . B 2 -24.897 -5.523 -25.252 1 48.44 ? C7 R7V 601 A 1 HETATM 8 C C8 R7V . . . B 2 -25.133 -4.607 -23.983 1 48.02 ? C8 R7V 601 A 1 HETATM 9 C C9 R7V . . . B 2 -24.522 -5.05 -22.653 1 47.27 ? C9 R7V 601 A 1 HETATM 10 C C10 R7V . . . B 2 -24.914 -6.498 -22.416 1 47.17 ? C10 R7V 601 A 1 HETATM 11 C C11 R7V . . . B 2 -23.822 -4.791 -26.1 1 48.48 ? C11 R7V 601 A 1 HETATM 12 C C12 R7V . . . B 2 -23.434 -3.528 -25.33 1 48.44 ? C12 R7V 601 A 1 HETATM 13 N N13 R7V . . . B 2 -24.565 -3.324 -24.414 1 48.49 ? N13 R7V 601 A 1 HETATM 14 C C14 R7V . . . B 2 -23.521 -11.076 -23.955 1 50.28 ? C14 R7V 601 A 1 HETATM 15 F F15 R7V . . . B 2 -22.93 -11.162 -22.707 1 50.86 ? F15 R7V 601 A 1 HETATM 16 C C16 R7V . . . B 2 -27.525 -6.711 -25.348 1 49.59 ? C16 R7V 601 A 1 HETATM 17 C C17 R7V . . . B 2 -27.394 -8.083 -25.471 1 49.44 ? C17 R7V 601 A 1 HETATM 18 C C18 R7V . . . B 2 -27.943 -8.905 -24.509 1 49.6 ? C18 R7V 601 A 1 HETATM 19 C C19 R7V . . . B 2 -28.634 -8.333 -23.477 1 49.68 ? C19 R7V 601 A 1 HETATM 20 C C20 R7V . . . B 2 -28.884 -6.987 -23.402 1 49.81 ? C20 R7V 601 A 1 HETATM 21 C C21 R7V . . . B 2 -28.331 -6.162 -24.362 1 49.72 ? C21 R7V 601 A 1 HETATM 22 C C22 R7V . . . B 2 -25.021 -2.167 -23.912 1 49.21 ? C22 R7V 601 A 1 HETATM 23 C C23 R7V . . . B 2 -24.264 -0.903 -24.24 1 49.86 ? C23 R7V 601 A 1 HETATM 24 C C24 R7V . . . B 2 -24.23 -0.017 -22.989 1 50.11 ? C24 R7V 601 A 1 HETATM 25 C C25 R7V . . . B 2 -23.438 1.26 -23.238 1 50.59 ? C25 R7V 601 A 1 HETATM 26 C C26 R7V . . . B 2 -24.039 2.063 -24.4 1 51.36 ? C26 R7V 601 A 1 HETATM 27 C C27 R7V . . . B 2 -24.151 1.178 -25.656 1 50.69 ? C27 R7V 601 A 1 HETATM 28 C C28 R7V . . . B 2 -24.907 -0.138 -25.421 1 50.1 ? C28 R7V 601 A 1 HETATM 29 C C29 R7V . . . B 2 -26.406 0.096 -25.264 1 49.77 ? C29 R7V 601 A 1 HETATM 30 O O30 R7V . . . B 2 -25.982 -2.144 -23.165 1 49.38 ? O30 R7V 601 A 1 HETATM 31 F F31 R7V . . . B 2 -29.047 -9.128 -22.46 1 49.79 ? F31 R7V 601 A 1 HETATM 32 S S32 R7V . . . B 2 -26.427 -5.668 -26.246 0.5 50.01 ? S32 R7V 601 A 1 HETATM 33 O O33 R7V . . . B 2 -26.104 -6.332 -27.475 1 50.43 ? O33 R7V 601 A 1 HETATM 34 O O34 R7V . . . B 2 -27.028 -4.366 -26.291 1 50.76 ? O34 R7V 601 A 1 HETATM 35 C C35 R7V . . . B 2 -22.513 -11.805 -24.917 1 50.28 ? C35 R7V 601 A 1 HETATM 36 F F36 R7V . . . B 2 -21.393 -11.104 -25.081 0.5 50.3 ? F36 R7V 601 A 1 HETATM 37 F F37 R7V . . . B 2 -22.17 -12.988 -24.416 0.5 50.43 ? F37 R7V 601 A 1 HETATM 38 F F38 R7V . . . B 2 -23.028 -12.02 -26.128 0.5 50.11 ? F38 R7V 601 A 1 HETATM 39 C C39 R7V . . . B 2 -23.168 3.262 -24.689 1 52.42 ? C39 R7V 601 A 1 HETATM 40 O O40 R7V . . . B 2 -21.948 3.225 -24.601 1 52.84 ? O40 R7V 601 A 1 HETATM 41 O O41 R7V . . . B 2 -23.844 4.324 -25.05 1 52.55 ? O41 R7V 601 A 1 HETATM 42 C C42 R7V . . . B 2 -24.873 -11.851 -23.823 1 50.86 ? C42 R7V 601 A 1 HETATM 43 F F43 R7V . . . B 2 -25.705 -11.547 -24.815 1 51.38 ? F43 R7V 601 A 1 HETATM 44 F F44 R7V . . . B 2 -24.684 -13.166 -23.849 1 50.98 ? F44 R7V 601 A 1 HETATM 45 F F45 R7V . . . B 2 -25.496 -11.563 -22.683 1 50.98 ? F45 R7V 601 A 1 # _model_server_stats.io_time_ms 109 _model_server_stats.parse_time_ms 10 _model_server_stats.create_model_time_ms 3 _model_server_stats.query_time_ms 264 _model_server_stats.encode_time_ms 4 _model_server_stats.element_count 45 #